RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
DNMT1-202ENST00000359526 PRUNE2Q8WUY3 3088 aa7.55□□□□□ -1.2
DNMT1-202ENST00000359526 A0A0C4DFX4 3053 aa7.55□□□□□ -1.2
DNMT1-202ENST00000359526 SPINK7P58062 85 aa7.55□□□□□ -1.2
DNMT1-202ENST00000359526 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
DNMT1-202ENST00000359526 SMR3BP02814 79 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-202ENST00000359526 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-202ENST00000359526 HECTD1Q9ULT8 2610 aa7.52□□□□□ -1.21
DNMT1-202ENST00000359526 A0A1B0GU33 70 aa7.51□□□□□ -1.21
DNMT1-202ENST00000359526 LINC00472Q9H8W2 130 aa7.51□□□□□ -1.21
DNMT1-202ENST00000359526 UNC80Q8N2C7 3258 aa7.51□□□□□ -1.21
DNMT1-202ENST00000359526 SETXQ7Z333 2677 aaKnown RBP7.5□□□□□ -1.21
DNMT1-202ENST00000359526 CDH23Q9H251 3354 aa7.49□□□□□ -1.21
DNMT1-202ENST00000359526 AKAP13Q12802 2813 aa7.49□□□□□ -1.21
DNMT1-202ENST00000359526 ZCCHC13Q8WW36 166 aaKnown RBP7.46□□□□□ -1.22
DNMT1-202ENST00000359526 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
DNMT1-202ENST00000359526 SZT2Q5T011 3432 aa7.42□□□□□ -1.22
DNMT1-202ENST00000359526 Q5W150 140 aa7.42□□□□□ -1.22
DNMT1-202ENST00000359526 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
DNMT1-202ENST00000359526 FLNAP21333 2647 aaKnown RBP7.41□□□□□ -1.22
DNMT1-202ENST00000359526 Q6ZR54 194 aa7.41□□□□□ -1.22
DNMT1-202ENST00000359526 XIRP2A4UGR9 3374 aa7.4□□□□□ -1.22
DNMT1-202ENST00000359526 ZNF292O60281 2723 aa7.38□□□□□ -1.23
DNMT1-202ENST00000359526 Q6ZSA8 131 aa7.38□□□□□ -1.23
DNMT1-202ENST00000359526 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
DNMT1-202ENST00000359526 TRIOO75962 3097 aa7.36□□□□□ -1.23
DNMT1-202ENST00000359526 CHD6Q8TD26 2715 aa7.36□□□□□ -1.23
DNMT1-202ENST00000359526 LINC00483Q53H64 154 aa7.36□□□□□ -1.23
DNMT1-202ENST00000359526 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
DNMT1-202ENST00000359526 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
DNMT1-202ENST00000359526 FLG2Q5D862 2391 aaPredicted RBP7.35□□□□□ -1.23
DNMT1-202ENST00000359526 WDFY4Q6ZS81 3184 aa7.35□□□□□ -1.23
DNMT1-202ENST00000359526 CENPEQ02224 2701 aa7.34□□□□□ -1.23
DNMT1-202ENST00000359526 A0A0A0MQY5 61 aa7.34□□□□□ -1.23
DNMT1-202ENST00000359526 CFAP54Q96N23 3096 aa7.34□□□□□ -1.23
DNMT1-202ENST00000359526 ITPR3Q14573 2671 aa7.34□□□□□ -1.24
DNMT1-202ENST00000359526 REV3LO60673 3130 aa7.33□□□□□ -1.24
DNMT1-202ENST00000359526 KRTAP4-16G5E9R7 235 aaPredicted RBP7.33□□□□□ -1.24
DNMT1-202ENST00000359526 MGAQ8IWI9 3026 aa7.33□□□□□ -1.24
DNMT1-202ENST00000359526 A6NN06 94 aa7.33□□□□□ -1.24
DNMT1-202ENST00000359526 Q5VSD8 79 aa7.3□□□□□ -1.24
DNMT1-202ENST00000359526 S4R3F8 94 aa7.3□□□□□ -1.24
DNMT1-202ENST00000359526 KRTAP29-1A8MX34 341 aaPredicted RBP7.29□□□□□ -1.24
DNMT1-202ENST00000359526 KRTAP1-5Q9BYS1 174 aa7.29□□□□□ -1.24
DNMT1-202ENST00000359526 NBEAL1Q6ZS30 2694 aa7.29□□□□□ -1.24
DNMT1-202ENST00000359526 UNC79Q9P2D8 2635 aa7.27□□□□□ -1.24
DNMT1-202ENST00000359526 SPTBN5Q9NRC6 3674 aaKnown RBP7.27□□□□□ -1.25
DNMT1-202ENST00000359526 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
DNMT1-202ENST00000359526 NOTCH1P46531 2555 aa7.26□□□□□ -1.25
DNMT1-202ENST00000359526 STAB1Q9NY15 2570 aa7.26□□□□□ -1.25
DNMT1-202ENST00000359526 COL6A3P12111 3177 aa7.25□□□□□ -1.25
DNMT1-202ENST00000359526 GCN1Q92616 2671 aaKnown RBP7.24□□□□□ -1.25
DNMT1-202ENST00000359526 KRTAP10-1P60331 282 aa7.23□□□□□ -1.25
DNMT1-202ENST00000359526 ROMO1P60602 79 aa7.22□□□□□ -1.25
DNMT1-202ENST00000359526 VPS13AQ96RL7 3174 aa7.21□□□□□ -1.26
DNMT1-202ENST00000359526 TEP1Q99973 2627 aaKnown RBP7.21□□□□□ -1.26
DNMT1-202ENST00000359526 CFAP46Q8IYW2 2715 aa7.21□□□□□ -1.26
DNMT1-202ENST00000359526 HELZ2Q9BYK8 2649 aaKnown RBP7.21□□□□□ -1.26
DNMT1-202ENST00000359526 SPATA8Q6RVD6 105 aa7.2□□□□□ -1.26
DNMT1-202ENST00000359526 RPL37P61927 97 aaKnown RBP7.19□□□□□ -1.26
DNMT1-202ENST00000359526 DMBT1Q9UGM3 2413 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-202ENST00000359526 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
DNMT1-202ENST00000359526 A8MU10 97 aa7.17□□□□□ -1.26
DNMT1-202ENST00000359526 DSPP15924 2871 aaKnown RBP7.17□□□□□ -1.26
DNMT1-202ENST00000359526 KRTAP16-1A8MUX0 517 aa7.17□□□□□ -1.26
DNMT1-202ENST00000359526 EYSQ5T1H1 3165 aa7.16□□□□□ -1.26
DNMT1-202ENST00000359526 Q6ZRN7 208 aaPredicted RBP7.16□□□□□ -1.26
DNMT1-202ENST00000359526 KRTAP10-2P60368 255 aa7.14□□□□□ -1.27
DNMT1-202ENST00000359526 ADM2Q7Z4H4 148 aa7.14□□□□□ -1.27
DNMT1-202ENST00000359526 VCANP13611 3396 aa7.12□□□□□ -1.27
DNMT1-202ENST00000359526 LAMA1P25391 3075 aa7.12□□□□□ -1.27
DNMT1-202ENST00000359526 R4GN34 69 aa7.12□□□□□ -1.27
DNMT1-202ENST00000359526 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
DNMT1-202ENST00000359526 COL6A5A8TX70 2615 aa7.11□□□□□ -1.27
DNMT1-202ENST00000359526 NBEAL2Q6ZNJ1 2754 aa7.1□□□□□ -1.27
DNMT1-202ENST00000359526 MAP1AP78559 2803 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-202ENST00000359526 CELSR3Q9NYQ7 3312 aa7.1□□□□□ -1.27
DNMT1-202ENST00000359526 PANO1I0J062 215 aa7.09□□□□□ -1.27
DNMT1-202ENST00000359526 TEX15Q9BXT5 2789 aa7.09□□□□□ -1.27
DNMT1-202ENST00000359526 DNAH14Q0VDD8 3507 aa7.08□□□□□ -1.28
DNMT1-202ENST00000359526 STAB2Q8WWQ8 2551 aa7.06□□□□□ -1.28
DNMT1-202ENST00000359526 KMT2BQ9UMN6 2715 aaPredicted RBP7.04□□□□□ -1.28
DNMT1-202ENST00000359526 USP34Q70CQ2 3546 aa7.03□□□□□ -1.28
DNMT1-202ENST00000359526 M0R2T5 61 aa7.02□□□□□ -1.29
DNMT1-202ENST00000359526 BAHCC1Q9P281 2608 aa7.02□□□□□ -1.29
DNMT1-202ENST00000359526 A0A087X002 238 aa7.01□□□□□ -1.29
DNMT1-202ENST00000359526 NOTCH2NLQ7Z3S9 236 aa7.01□□□□□ -1.29
DNMT1-202ENST00000359526 KRTAP7-1Q8IUC3 87 aa7□□□□□ -1.29
DNMT1-202ENST00000359526 FREM2Q5SZK8 3169 aa7□□□□□ -1.29
DNMT1-202ENST00000359526 M0QZ58 72 aa6.98□□□□□ -1.29
DNMT1-202ENST00000359526 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
DNMT1-202ENST00000359526 NDUFAF8A1L188 74 aa6.98□□□□□ -1.29
DNMT1-202ENST00000359526 FRYQ5TBA9 3013 aa6.97□□□□□ -1.29
DNMT1-202ENST00000359526 KRTAP13-1Q8IUC0 172 aa6.97□□□□□ -1.29
DNMT1-202ENST00000359526 IGSF10Q6WRI0 2623 aa6.97□□□□□ -1.29
DNMT1-202ENST00000359526 SPEGQ15772 3267 aa6.97□□□□□ -1.29
DNMT1-202ENST00000359526 BOD1L1Q8NFC6 3051 aa6.92□□□□□ -1.3
DNMT1-202ENST00000359526 FRYLO94915 3013 aa6.92□□□□□ -1.3
DNMT1-202ENST00000359526 DMXL1Q9Y485 3027 aa6.91□□□□□ -1.3
DNMT1-202ENST00000359526 UBR5O95071 2799 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms