RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 Q5VV11 94 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 EYSQ5T1H1 3165 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 FBN2P35556 2912 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 ZANQ9Y493 2812 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 IGHV6-1A0A0B4J1U7 121 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 GCN1Q92616 2671 aaKnown RBP2.66□□□□□ -1.98
SYNE2-204ENST00000358025 LINC00472Q9H8W2 130 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 UTRNP46939 3433 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 CAMK2N1Q7Z7J9 78 aa2.66□□□□□ -1.98
SYNE2-204ENST00000358025 NOTCH1P46531 2555 aa2.65□□□□□ -1.98
SYNE2-204ENST00000358025 PCOTHQ58A44 107 aa2.65□□□□□ -1.98
SYNE2-204ENST00000358025 COL6A5A8TX70 2615 aa2.65□□□□□ -1.98
SYNE2-204ENST00000358025 TNP2Q05952 138 aa2.65□□□□□ -1.98
SYNE2-204ENST00000358025 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
SYNE2-204ENST00000358025 Q6ZR54 194 aa2.65□□□□□ -1.99
SYNE2-204ENST00000358025 XIRP2A4UGR9 3374 aa2.65□□□□□ -1.99
SYNE2-204ENST00000358025 MGAM2Q2M2H8 2515 aa2.64□□□□□ -1.99
SYNE2-204ENST00000358025 NIPBLQ6KC79 2804 aaeCLIP2.64□□□□□ -1.99
SYNE2-204ENST00000358025 RBM12B-AS1Q9P1G2 102 aa2.64□□□□□ -1.99
SYNE2-204ENST00000358025 KRTAP29-1A8MX34 341 aaPredicted RBP2.64□□□□□ -1.99
SYNE2-204ENST00000358025 MAST4O15021 2626 aa2.64□□□□□ -1.99
SYNE2-204ENST00000358025 CELSR1Q9NYQ6 3014 aa2.64□□□□□ -1.99
SYNE2-204ENST00000358025 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
SYNE2-204ENST00000358025 LOC400499M0QZD8 3231 aa2.63□□□□□ -1.99
SYNE2-204ENST00000358025 LINC01554Q52M75 96 aa2.63□□□□□ -1.99
SYNE2-204ENST00000358025 COX6B2Q6YFQ2 88 aa2.63□□□□□ -1.99
SYNE2-204ENST00000358025 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
SYNE2-204ENST00000358025 PRLHP81277 87 aa2.62□□□□□ -1.99
SYNE2-204ENST00000358025 ZNF861PO60384 105 aa2.62□□□□□ -1.99
SYNE2-204ENST00000358025 ST20-AS1Q8NBB2 130 aa2.62□□□□□ -1.99
SYNE2-204ENST00000358025 KRTAP4-16G5E9R7 235 aaPredicted RBP2.62□□□□□ -1.99
SYNE2-204ENST00000358025 SMR3BP02814 79 aaPredicted RBP2.61□□□□□ -1.99
SYNE2-204ENST00000358025 STAB1Q9NY15 2570 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 CHTF8P0CG12 524 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 HECTD1Q9ULT8 2610 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 STAB2Q8WWQ8 2551 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 IGKV2D-30A0A075B6S6 120 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 IGKV2-30P06310 120 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 SPACA4Q8TDM5 124 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 FLNBO75369 2602 aaKnown RBP2.6□□□□□ -1.99
SYNE2-204ENST00000358025 KRTAP26-1Q6PEX3 210 aa2.6□□□□□ -1.99
SYNE2-204ENST00000358025 TEP1Q99973 2627 aaKnown RBP2.59□□□□□ -1.99
SYNE2-204ENST00000358025 LINC00483Q53H64 154 aa2.59□□□□□ -1.99
SYNE2-204ENST00000358025 A6NN06 94 aa2.59□□□□□ -2
SYNE2-204ENST00000358025 FAM229BQ4G0N7 80 aa2.59□□□□□ -2
SYNE2-204ENST00000358025 PRR26Q8N8Z3 221 aa2.59□□□□□ -2
SYNE2-204ENST00000358025 DMAC1Q96GE9 116 aa2.59□□□□□ -2
SYNE2-204ENST00000358025 IGLV5-52A0A0A0MRZ9 124 aa2.58□□□□□ -2
SYNE2-204ENST00000358025 LAMA3Q16787 3333 aa2.58□□□□□ -2
SYNE2-204ENST00000358025 IGLV7-43P04211 117 aa2.58□□□□□ -2
SYNE2-204ENST00000358025 BRCA2P51587 3418 aa2.58□□□□□ -2
SYNE2-204ENST00000358025 FLNCQ14315 2725 aa2.58□□□□□ -2
SYNE2-204ENST00000358025 ITPR2Q14571 2701 aa2.58□□□□□ -2
SYNE2-204ENST00000358025 PDZD2O15018 2839 aa2.57□□□□□ -2
SYNE2-204ENST00000358025 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
SYNE2-204ENST00000358025 C1orf134Q5TEV5 83 aa2.56□□□□□ -2
SYNE2-204ENST00000358025 SETXQ7Z333 2677 aaKnown RBP2.56□□□□□ -2
SYNE2-204ENST00000358025 NBDYA0A0U1RRE5 68 aa2.56□□□□□ -2
SYNE2-204ENST00000358025 NOTCH2NLQ7Z3S9 236 aa2.56□□□□□ -2
SYNE2-204ENST00000358025 J3QL48 77 aa2.56□□□□□ -2
SYNE2-204ENST00000358025 Q8NDZ9 215 aa2.55□□□□□ -2
SYNE2-204ENST00000358025 C9orf92A6NGG3 77 aa2.55□□□□□ -2
SYNE2-204ENST00000358025 MMP24-AS1A0A0U1RRL7 71 aa2.54□□□□□ -2
SYNE2-204ENST00000358025 HRES1P13985 223 aa2.54□□□□□ -2
SYNE2-204ENST00000358025 CRIPTQ9P021 101 aa2.54□□□□□ -2
SYNE2-204ENST00000358025 PLAC8Q9NZF1 115 aa2.53□□□□□ -2
SYNE2-204ENST00000358025 FAM168BA1KXE4 195 aa2.53□□□□□ -2
SYNE2-204ENST00000358025 KRTAP1-3Q8IUG1 177 aa2.53□□□□□ -2
SYNE2-204ENST00000358025 ANAPC11Q9NYG5 84 aa2.53□□□□□ -2
SYNE2-204ENST00000358025 A0A1W2PNN7 141 aa2.53□□□□□ -2
SYNE2-204ENST00000358025 A0A0G2JQZ4 141 aa2.53□□□□□ -2.01
SYNE2-204ENST00000358025 HRNRQ86YZ3 2850 aaPredicted RBP2.52□□□□□ -2.01
SYNE2-204ENST00000358025 RPS29P62273 56 aaKnown RBP2.52□□□□□ -2.01
SYNE2-204ENST00000358025 A0A1B0GU33 70 aa2.51□□□□□ -2.01
SYNE2-204ENST00000358025 BAHCC1Q9P281 2608 aa2.51□□□□□ -2.01
SYNE2-204ENST00000358025 Q96NJ1 140 aa2.51□□□□□ -2.01
SYNE2-204ENST00000358025 VCANP13611 3396 aa2.5□□□□□ -2.01
SYNE2-204ENST00000358025 SPINK7P58062 85 aa2.5□□□□□ -2.01
SYNE2-204ENST00000358025 APLNQ9ULZ1 77 aa2.5□□□□□ -2.01
SYNE2-204ENST00000358025 TYMSOSQ8TAI1 123 aa2.5□□□□□ -2.01
SYNE2-204ENST00000358025 KRTAP1-1Q07627 177 aa2.5□□□□□ -2.01
SYNE2-204ENST00000358025 A0A087WTM6 91 aa2.5□□□□□ -2.01
SYNE2-204ENST00000358025 RTL8CO15255 209 aa2.49□□□□□ -2.01
SYNE2-204ENST00000358025 IGSF10Q6WRI0 2623 aa2.49□□□□□ -2.01
SYNE2-204ENST00000358025 A0A0D9SG42 100 aa2.49□□□□□ -2.01
SYNE2-204ENST00000358025 KRTAP24-1Q3LI83 254 aa2.48□□□□□ -2.01
SYNE2-204ENST00000358025 CDH23Q9H251 3354 aa2.48□□□□□ -2.01
SYNE2-204ENST00000358025 PSORS1C2Q9UIG4 136 aa2.48□□□□□ -2.01
SYNE2-204ENST00000358025 WWC2-AS2Q96NR7 200 aa2.48□□□□□ -2.01
SYNE2-204ENST00000358025 SPEGQ15772 3267 aa2.48□□□□□ -2.01
SYNE2-204ENST00000358025 DCHS1Q96JQ0 3298 aa2.48□□□□□ -2.01
SYNE2-204ENST00000358025 LINC00304Q8N9R0 145 aa2.46□□□□□ -2.02
SYNE2-204ENST00000358025 ROMO1P60602 79 aa2.46□□□□□ -2.02
SYNE2-204ENST00000358025 CSAG1Q6PB30 78 aa2.46□□□□□ -2.02
SYNE2-204ENST00000358025 KRTAP13-1Q8IUC0 172 aa2.46□□□□□ -2.02
SYNE2-204ENST00000358025 Q5W150 140 aa2.46□□□□□ -2.02
SYNE2-204ENST00000358025 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms