RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 SMR3BP02814 79 aaPredicted RBP12.75□□□□□ -0.37
RNF38-204ENST00000357058 PSPHP1O15172 72 aa12.75□□□□□ -0.37
RNF38-204ENST00000357058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.74□□□□□ -0.37
RNF38-204ENST00000357058 MRPL34Q9BQ48 92 aaKnown RBP12.73□□□□□ -0.37
RNF38-204ENST00000357058 APCP25054 2843 aa12.73□□□□□ -0.37
RNF38-204ENST00000357058 C8orf87E5RJ46 101 aa12.73□□□□□ -0.37
RNF38-204ENST00000357058 LINC00336Q6ZUF6 198 aa12.72□□□□□ -0.37
RNF38-204ENST00000357058 KRTAP26-1Q6PEX3 210 aa12.72□□□□□ -0.37
RNF38-204ENST00000357058 Q96NJ1 140 aa12.71□□□□□ -0.37
RNF38-204ENST00000357058 KRTAP1-5Q9BYS1 174 aa12.7□□□□□ -0.38
RNF38-204ENST00000357058 C8orf17Q9NRJ1 99 aa12.7□□□□□ -0.38
RNF38-204ENST00000357058 HRNRQ86YZ3 2850 aaPredicted RBP12.69□□□□□ -0.38
RNF38-204ENST00000357058 C7orf65Q6ZTY9 151 aa12.68□□□□□ -0.38
RNF38-204ENST00000357058 CFAP47Q6ZTR5 3102 aa12.67□□□□□ -0.38
RNF38-204ENST00000357058 A0A1B0GVX0 72 aa12.67□□□□□ -0.38
RNF38-204ENST00000357058 LINC00304Q8N9R0 145 aa12.66□□□□□ -0.38
RNF38-204ENST00000357058 DSCR10P59022 87 aa12.66□□□□□ -0.38
RNF38-204ENST00000357058 HIVEP1P15822 2718 aa12.64□□□□□ -0.39
RNF38-204ENST00000357058 RPS28P62857 69 aaKnown RBP12.63□□□□□ -0.39
RNF38-204ENST00000357058 ACYP2P14621 99 aa12.63□□□□□ -0.39
RNF38-204ENST00000357058 ZANQ9Y493 2812 aa12.62□□□□□ -0.39
RNF38-204ENST00000357058 LOC101927531A0A1B0GV80 90 aa12.61□□□□□ -0.39
RNF38-204ENST00000357058 SPRR1AP35321 89 aa12.6□□□□□ -0.39
RNF38-204ENST00000357058 SPAG11AQ6PDA7 123 aa12.58□□□□□ -0.4
RNF38-204ENST00000357058 KLKP1Q107X0 134 aa12.57□□□□□ -0.4
RNF38-204ENST00000357058 PLAC8Q9NZF1 115 aa12.53□□□□□ -0.4
RNF38-204ENST00000357058 NSD1Q96L73 2696 aaPredicted RBP12.52□□□□□ -0.4
RNF38-204ENST00000357058 ATP11AUNQ6ZP68 121 aa12.48□□□□□ -0.41
RNF38-204ENST00000357058 NBEAL1Q6ZS30 2694 aa12.47□□□□□ -0.41
RNF38-204ENST00000357058 C4orf26Q17RF5 130 aa12.46□□□□□ -0.41
RNF38-204ENST00000357058 C9orf92A6NGG3 77 aa12.46□□□□□ -0.41
RNF38-204ENST00000357058 H7BZZ5 65 aa12.46□□□□□ -0.41
RNF38-204ENST00000357058 A0A1B0GU69 56 aa12.45□□□□□ -0.42
RNF38-204ENST00000357058 PMAIP1Q13794 54 aa12.43□□□□□ -0.42
RNF38-204ENST00000357058 C1orf195Q5TG92 126 aa12.42□□□□□ -0.42
RNF38-204ENST00000357058 COA5Q86WW8 74 aa12.4□□□□□ -0.42
RNF38-204ENST00000357058 DMDP11532 3685 aa12.4□□□□□ -0.42
RNF38-204ENST00000357058 CD164Q04900 197 aa12.39□□□□□ -0.43
RNF38-204ENST00000357058 J3QL48 77 aa12.39□□□□□ -0.43
RNF38-204ENST00000357058 MUC3AQ02505 3323 aa12.39□□□□□ -0.43
RNF38-204ENST00000357058 CRYBG3Q68DQ2 2970 aa12.39□□□□□ -0.43
RNF38-204ENST00000357058 KMT2BQ9UMN6 2715 aaPredicted RBP12.37□□□□□ -0.43
RNF38-204ENST00000357058 OCR1Q9BZK8 76 aa12.37□□□□□ -0.43
RNF38-204ENST00000357058 CELSR2Q9HCU4 2923 aa12.37□□□□□ -0.43
RNF38-204ENST00000357058 WDFY3Q8IZQ1 3526 aa12.36□□□□□ -0.43
RNF38-204ENST00000357058 SPRR1BP22528 89 aa12.36□□□□□ -0.43
RNF38-204ENST00000357058 RELNP78509 3460 aa12.36□□□□□ -0.43
RNF38-204ENST00000357058 PRR26Q8N8Z3 221 aa12.33□□□□□ -0.44
RNF38-204ENST00000357058 LAMA5O15230 3695 aa12.32□□□□□ -0.44
RNF38-204ENST00000357058 IGLV8-61A0A075B6I0 122 aa12.31□□□□□ -0.44
RNF38-204ENST00000357058 FAM229BQ4G0N7 80 aa12.31□□□□□ -0.44
RNF38-204ENST00000357058 ASH1LQ9NR48 2969 aaKnown RBP12.31□□□□□ -0.44
RNF38-204ENST00000357058 NIPBLQ6KC79 2804 aaeCLIP12.31□□□□□ -0.44
RNF38-204ENST00000357058 PANO1I0J062 215 aa12.29□□□□□ -0.44
RNF38-204ENST00000357058 KRTAP10-2P60368 255 aa12.29□□□□□ -0.44
RNF38-204ENST00000357058 Q6ZR54 194 aa12.27□□□□□ -0.44
RNF38-204ENST00000357058 KRTAP4-16G5E9R7 235 aaPredicted RBP12.27□□□□□ -0.45
RNF38-204ENST00000357058 PRO0628Q9UI54 55 aa12.26□□□□□ -0.45
RNF38-204ENST00000357058 DCHS2Q6V1P9 2916 aa12.26□□□□□ -0.45
RNF38-204ENST00000357058 KRTAP10-1P60331 282 aa12.25□□□□□ -0.45
RNF38-204ENST00000357058 A8MUN3 132 aa12.23□□□□□ -0.45
RNF38-204ENST00000357058 NF1P21359 2839 aa12.22□□□□□ -0.45
RNF38-204ENST00000357058 FBN2P35556 2912 aa12.22□□□□□ -0.45
RNF38-204ENST00000357058 MMP24-AS1A0A0U1RRL7 71 aa12.2□□□□□ -0.46
RNF38-204ENST00000357058 SPANXA2-OT1Q8N9U9 137 aa12.2□□□□□ -0.46
RNF38-204ENST00000357058 LCE6AA0A183 80 aa12.19□□□□□ -0.46
RNF38-204ENST00000357058 LINC00472Q9H8W2 130 aa12.19□□□□□ -0.46
RNF38-204ENST00000357058 ASPMQ8IZT6 3477 aa12.19□□□□□ -0.46
RNF38-204ENST00000357058 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
RNF38-204ENST00000357058 ZFHX4Q86UP3 3567 aa12.14□□□□□ -0.47
RNF38-204ENST00000357058 Q6ZRN7 208 aaPredicted RBP12.14□□□□□ -0.47
RNF38-204ENST00000357058 LINC00483Q53H64 154 aa12.1□□□□□ -0.47
RNF38-204ENST00000357058 STAB2Q8WWQ8 2551 aa12.1□□□□□ -0.47
RNF38-204ENST00000357058 MXRA5Q9NR99 2828 aa12.09□□□□□ -0.47
RNF38-204ENST00000357058 Q8N1X5 172 aa12.09□□□□□ -0.47
RNF38-204ENST00000357058 CYP4F30PQ9H0H9 118 aa12.08□□□□□ -0.48
RNF38-204ENST00000357058 KRTAP7-1Q8IUC3 87 aa12.08□□□□□ -0.48
RNF38-204ENST00000357058 TENM4Q6N022 2769 aa12.06□□□□□ -0.48
RNF38-204ENST00000357058 KRTAP11-1Q8IUC1 163 aa12.06□□□□□ -0.48
RNF38-204ENST00000357058 CYSTM1Q9H1C7 97 aa12.04□□□□□ -0.48
RNF38-204ENST00000357058 IGLV7-46A0A075B6I9 117 aa12.02□□□□□ -0.48
RNF38-204ENST00000357058 UQCR11O14957 56 aa11.99□□□□□ -0.49
RNF38-204ENST00000357058 COX6B2Q6YFQ2 88 aa11.98□□□□□ -0.49
RNF38-204ENST00000357058 HRES1P13985 223 aa11.97□□□□□ -0.49
RNF38-204ENST00000357058 Q5VSD8 79 aa11.93□□□□□ -0.5
RNF38-204ENST00000357058 Q8N9P0 234 aaPredicted RBP11.93□□□□□ -0.5
RNF38-204ENST00000357058 ZCCHC13Q8WW36 166 aaKnown RBP11.92□□□□□ -0.5
RNF38-204ENST00000357058 RBM12B-AS1Q9P1G2 102 aa11.92□□□□□ -0.5
RNF38-204ENST00000357058 A0A087X002 238 aa11.89□□□□□ -0.51
RNF38-204ENST00000357058 MIR22HGQ0VDD5 57 aa11.88□□□□□ -0.51
RNF38-204ENST00000357058 KRTAP21-3Q3LHN1 58 aa11.88□□□□□ -0.51
RNF38-204ENST00000357058 Q5W150 140 aa11.88□□□□□ -0.51
RNF38-204ENST00000357058 PDZD2O15018 2839 aa11.84□□□□□ -0.51
RNF38-204ENST00000357058 Q6ZSA8 131 aa11.83□□□□□ -0.52
RNF38-204ENST00000357058 SMG1Q96Q15 3661 aaKnown RBP11.81□□□□□ -0.52
RNF38-204ENST00000357058 Q1T7F1 81 aa11.81□□□□□ -0.52
RNF38-204ENST00000357058 KRTAP13-1Q8IUC0 172 aa11.8□□□□□ -0.52
RNF38-204ENST00000357058 KRTAP29-1A8MX34 341 aaPredicted RBP11.79□□□□□ -0.52
RNF38-204ENST00000357058 SPINK7P58062 85 aa11.7□□□□□ -0.54
RNF38-204ENST00000357058 NOTCH2NLQ7Z3S9 236 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms