RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
TRIM4-203ENST00000355947 SEC61GP60059 68 aa8.72□□□□□ -1.01
TRIM4-203ENST00000355947 COL7A1Q02388 2944 aa8.71□□□□□ -1.02
TRIM4-203ENST00000355947 LINC01556Q5JQF7 62 aa8.71□□□□□ -1.02
TRIM4-203ENST00000355947 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
TRIM4-203ENST00000355947 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
TRIM4-203ENST00000355947 KRTAP10-11P60412 298 aa8.7□□□□□ -1.02
TRIM4-203ENST00000355947 PRR15LQ9BU68 103 aa8.7□□□□□ -1.02
TRIM4-203ENST00000355947 NDUFS5O43920 106 aa8.69□□□□□ -1.02
TRIM4-203ENST00000355947 PMAIP1Q13794 54 aa8.69□□□□□ -1.02
TRIM4-203ENST00000355947 H0Y9P7 68 aa8.69□□□□□ -1.02
TRIM4-203ENST00000355947 CASC2Q6XLA1 102 aa8.67□□□□□ -1.02
TRIM4-203ENST00000355947 LINC00588Q9Y4M8 146 aa8.67□□□□□ -1.02
TRIM4-203ENST00000355947 B9D2Q9BPU9 175 aa8.66□□□□□ -1.02
TRIM4-203ENST00000355947 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.03
TRIM4-203ENST00000355947 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
TRIM4-203ENST00000355947 PHF5AQ7RTV0 110 aaKnown RBP8.63□□□□□ -1.03
TRIM4-203ENST00000355947 A6NED7 52 aa8.62□□□□□ -1.03
TRIM4-203ENST00000355947 UBE2DNLQ8IWF7 75 aa8.61□□□□□ -1.03
TRIM4-203ENST00000355947 TNP2Q05952 138 aa8.61□□□□□ -1.03
TRIM4-203ENST00000355947 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
TRIM4-203ENST00000355947 KRTAP4-16G5E9R7 235 aaPredicted RBP8.59□□□□□ -1.03
TRIM4-203ENST00000355947 NDUFB1O75438 58 aa8.59□□□□□ -1.03
TRIM4-203ENST00000355947 DNAH10OSP0CZ25 163 aa8.57□□□□□ -1.04
TRIM4-203ENST00000355947 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
TRIM4-203ENST00000355947 ZCCHC13Q8WW36 166 aaKnown RBP8.56□□□□□ -1.04
TRIM4-203ENST00000355947 H3BNG1 76 aa8.56□□□□□ -1.04
TRIM4-203ENST00000355947 Q1T7F1 81 aa8.56□□□□□ -1.04
TRIM4-203ENST00000355947 SPRR1AP35321 89 aa8.55□□□□□ -1.04
TRIM4-203ENST00000355947 F8WDY8 70 aa8.54□□□□□ -1.04
TRIM4-203ENST00000355947 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
TRIM4-203ENST00000355947 IGHV6-1A0A0B4J1U7 121 aa8.52□□□□□ -1.05
TRIM4-203ENST00000355947 PRR15Q8IV56 129 aa8.52□□□□□ -1.05
TRIM4-203ENST00000355947 TLX1NBP0CAT3 122 aa8.51□□□□□ -1.05
TRIM4-203ENST00000355947 Q5VV11 94 aa8.51□□□□□ -1.05
TRIM4-203ENST00000355947 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
TRIM4-203ENST00000355947 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
TRIM4-203ENST00000355947 COA5Q86WW8 74 aa8.5□□□□□ -1.05
TRIM4-203ENST00000355947 ANAPC11Q9NYG5 84 aa8.49□□□□□ -1.05
TRIM4-203ENST00000355947 A0A1B0GW54 56 aa8.49□□□□□ -1.05
TRIM4-203ENST00000355947 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
TRIM4-203ENST00000355947 CYP4F30PQ9H0H9 118 aa8.48□□□□□ -1.05
TRIM4-203ENST00000355947 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
TRIM4-203ENST00000355947 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
TRIM4-203ENST00000355947 LCE6AA0A183 80 aa8.47□□□□□ -1.05
TRIM4-203ENST00000355947 PLA2G2DQ9UNK4 145 aa8.47□□□□□ -1.05
TRIM4-203ENST00000355947 A8MWP4 228 aa8.46□□□□□ -1.06
TRIM4-203ENST00000355947 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
TRIM4-203ENST00000355947 RETNLBQ9BQ08 111 aa8.45□□□□□ -1.06
TRIM4-203ENST00000355947 IGLV5-37A0A075B6J1 123 aa8.45□□□□□ -1.06
TRIM4-203ENST00000355947 KRTAP24-1Q3LI83 254 aa8.44□□□□□ -1.06
TRIM4-203ENST00000355947 LIMD2Q9BT23 127 aa8.42□□□□□ -1.06
TRIM4-203ENST00000355947 KRTAP29-1A8MX34 341 aaPredicted RBP8.41□□□□□ -1.06
TRIM4-203ENST00000355947 ANK2Q01484 3957 aa8.38□□□□□ -1.07
TRIM4-203ENST00000355947 LCA10Q71F78 164 aa8.38□□□□□ -1.07
TRIM4-203ENST00000355947 PANO1I0J062 215 aa8.38□□□□□ -1.07
TRIM4-203ENST00000355947 CD164Q04900 197 aa8.38□□□□□ -1.07
TRIM4-203ENST00000355947 MOBPQ13875 183 aa8.38□□□□□ -1.07
TRIM4-203ENST00000355947 LINC00472Q9H8W2 130 aa8.37□□□□□ -1.07
TRIM4-203ENST00000355947 MMP24-AS1A0A0U1RRL7 71 aa8.37□□□□□ -1.07
TRIM4-203ENST00000355947 K7EIL1 84 aa8.36□□□□□ -1.07
TRIM4-203ENST00000355947 PRR26Q8N8Z3 221 aa8.36□□□□□ -1.07
TRIM4-203ENST00000355947 DNAH10Q8IVF4 4471 aa8.32□□□□□ -1.08
TRIM4-203ENST00000355947 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
TRIM4-203ENST00000355947 SPINK7P58062 85 aa8.32□□□□□ -1.08
TRIM4-203ENST00000355947 SPANXA2-OT1Q8N9U9 137 aa8.32□□□□□ -1.08
TRIM4-203ENST00000355947 A0A087X002 238 aa8.31□□□□□ -1.08
TRIM4-203ENST00000355947 NOTCH2NLQ7Z3S9 236 aa8.31□□□□□ -1.08
TRIM4-203ENST00000355947 C8orf17Q9NRJ1 99 aa8.31□□□□□ -1.08
TRIM4-203ENST00000355947 C9orf163Q8N9P6 203 aa8.3□□□□□ -1.08
TRIM4-203ENST00000355947 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
TRIM4-203ENST00000355947 RBM12B-AS1Q9P1G2 102 aa8.3□□□□□ -1.08
TRIM4-203ENST00000355947 H3BPC8 53 aa8.29□□□□□ -1.08
TRIM4-203ENST00000355947 KTN1-AS1Q86SY8 53 aa8.29□□□□□ -1.08
TRIM4-203ENST00000355947 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
TRIM4-203ENST00000355947 TGP01266 2768 aa8.28□□□□□ -1.08
TRIM4-203ENST00000355947 IGLV7-46A0A075B6I9 117 aa8.28□□□□□ -1.08
TRIM4-203ENST00000355947 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
TRIM4-203ENST00000355947 HRES1P13985 223 aa8.26□□□□□ -1.09
TRIM4-203ENST00000355947 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
TRIM4-203ENST00000355947 ATP11AUNQ6ZP68 121 aa8.25□□□□□ -1.09
TRIM4-203ENST00000355947 Q75L30 129 aa8.24□□□□□ -1.09
TRIM4-203ENST00000355947 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
TRIM4-203ENST00000355947 LYSTQ99698 3801 aa8.24□□□□□ -1.09
TRIM4-203ENST00000355947 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
TRIM4-203ENST00000355947 A0A1B0GVX0 72 aa8.22□□□□□ -1.09
TRIM4-203ENST00000355947 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.1
TRIM4-203ENST00000355947 TP53AIP1Q9HCN2 124 aa8.21□□□□□ -1.1
TRIM4-203ENST00000355947 MDFIQ99750 246 aa8.19□□□□□ -1.1
TRIM4-203ENST00000355947 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
TRIM4-203ENST00000355947 SPRR1BP22528 89 aa8.17□□□□□ -1.1
TRIM4-203ENST00000355947 Q5W150 140 aa8.17□□□□□ -1.1
TRIM4-203ENST00000355947 FBN3Q75N90 2809 aa8.17□□□□□ -1.1
TRIM4-203ENST00000355947 CMYA5Q8N3K9 4069 aa8.16□□□□□ -1.1
TRIM4-203ENST00000355947 Q96NJ1 140 aa8.16□□□□□ -1.1
TRIM4-203ENST00000355947 SPINK1P00995 79 aa8.16□□□□□ -1.1
TRIM4-203ENST00000355947 NBDYA0A0U1RRE5 68 aa8.15□□□□□ -1.1
TRIM4-203ENST00000355947 LINC01558Q9Y6Z2 57 aa8.14□□□□□ -1.11
TRIM4-203ENST00000355947 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
TRIM4-203ENST00000355947 A6NN06 94 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms