RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
DDX55-202ENST00000354291 Q5XG85 94 aa8.43□□□□□ -1.06
DDX55-202ENST00000354291 SMIM11BQ8TCY0 68 aa8.42□□□□□ -1.06
DDX55-202ENST00000354291 S100A2P29034 98 aa8.41□□□□□ -1.06
DDX55-202ENST00000354291 VAMP3Q15836 100 aa8.41□□□□□ -1.06
DDX55-202ENST00000354291 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.06
DDX55-202ENST00000354291 CFC1P0CG37 223 aa8.4□□□□□ -1.06
DDX55-202ENST00000354291 Q6Q795 121 aa8.4□□□□□ -1.06
DDX55-202ENST00000354291 MACF1Q9UPN3 7388 aaKnown RBP8.4□□□□□ -1.06
DDX55-202ENST00000354291 HIST3H2BBQ8N257 126 aa8.39□□□□□ -1.07
DDX55-202ENST00000354291 KRTAP19-1Q8IUB9 90 aa8.38□□□□□ -1.07
DDX55-202ENST00000354291 HIST1H2BLQ99880 126 aa8.38□□□□□ -1.07
DDX55-202ENST00000354291 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
DDX55-202ENST00000354291 A0A0G2JQZ4 141 aa8.35□□□□□ -1.07
DDX55-202ENST00000354291 F8WEM9 126 aa8.35□□□□□ -1.07
DDX55-202ENST00000354291 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
DDX55-202ENST00000354291 TCL1BO95988 128 aa8.34□□□□□ -1.07
DDX55-202ENST00000354291 KRTAP9-8Q9BYQ0 159 aa8.34□□□□□ -1.07
DDX55-202ENST00000354291 hADV29S1A0JD25 119 aa8.33□□□□□ -1.08
DDX55-202ENST00000354291 S100A6P06703 90 aa8.33□□□□□ -1.08
DDX55-202ENST00000354291 RPL37P61927 97 aaKnown RBP8.33□□□□□ -1.08
DDX55-202ENST00000354291 S100A1P23297 94 aa8.31□□□□□ -1.08
DDX55-202ENST00000354291 Q6ZQY7 126 aa8.31□□□□□ -1.08
DDX55-202ENST00000354291 Q6JHZ5 121 aa8.3□□□□□ -1.08
DDX55-202ENST00000354291 HIST1H4GQ99525 98 aa8.29□□□□□ -1.08
DDX55-202ENST00000354291 SCGB1D1O95968 90 aa8.28□□□□□ -1.08
DDX55-202ENST00000354291 BVES-AS1Q5T3Y7 98 aa8.28□□□□□ -1.08
DDX55-202ENST00000354291 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.27□□□□□ -1.09
DDX55-202ENST00000354291 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
DDX55-202ENST00000354291 PPDPFLQ8WWR9 84 aa8.26□□□□□ -1.09
DDX55-202ENST00000354291 CLEC2BQ92478 149 aa8.26□□□□□ -1.09
DDX55-202ENST00000354291 COX8AP10176 69 aa8.25□□□□□ -1.09
DDX55-202ENST00000354291 C12orf57Q99622 126 aa8.25□□□□□ -1.09
DDX55-202ENST00000354291 IGFL1Q6UW32 110 aa8.24□□□□□ -1.09
DDX55-202ENST00000354291 SNHG12Q9BXW3 62 aa8.24□□□□□ -1.09
DDX55-202ENST00000354291 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
DDX55-202ENST00000354291 LCE2BO14633 110 aa8.22□□□□□ -1.09
DDX55-202ENST00000354291 DLEU1O43261 78 aa8.22□□□□□ -1.09
DDX55-202ENST00000354291 SNCGO76070 127 aa8.21□□□□□ -1.1
DDX55-202ENST00000354291 RAB37Q96AX2 223 aa8.18□□□□□ -1.1
DDX55-202ENST00000354291 H0YGX0 51 aa8.17□□□□□ -1.1
DDX55-202ENST00000354291 C14orf144Q96I85 54 aa8.17□□□□□ -1.1
DDX55-202ENST00000354291 HIGD1BQ9P298 99 aa8.16□□□□□ -1.1
DDX55-202ENST00000354291 LST1O00453 97 aa8.15□□□□□ -1.1
DDX55-202ENST00000354291 MT2AP02795 61 aa8.15□□□□□ -1.1
DDX55-202ENST00000354291 A0A0B4J2C4 111 aa8.14□□□□□ -1.11
DDX55-202ENST00000354291 H3BUT2 72 aa8.14□□□□□ -1.11
DDX55-202ENST00000354291 LINC00846Q9NV44 126 aa8.14□□□□□ -1.11
DDX55-202ENST00000354291 SPATA45Q537H7 98 aa8.13□□□□□ -1.11
DDX55-202ENST00000354291 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
DDX55-202ENST00000354291 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
DDX55-202ENST00000354291 PAM16Q9Y3D7 125 aa8.13□□□□□ -1.11
DDX55-202ENST00000354291 OBSCN-AS1Q96MR7 158 aa8.12□□□□□ -1.11
DDX55-202ENST00000354291 GHRHP01286 108 aa8.11□□□□□ -1.11
DDX55-202ENST00000354291 NDUFV3P56181 108 aaKnown RBP8.11□□□□□ -1.11
DDX55-202ENST00000354291 Q75L30 129 aa8.11□□□□□ -1.11
DDX55-202ENST00000354291 TEN1Q86WV5 123 aa8.11□□□□□ -1.11
DDX55-202ENST00000354291 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
DDX55-202ENST00000354291 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
DDX55-202ENST00000354291 A0A1B0GX51 115 aa8.09□□□□□ -1.11
DDX55-202ENST00000354291 MT1FP04733 61 aa8.09□□□□□ -1.11
DDX55-202ENST00000354291 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
DDX55-202ENST00000354291 C2orf91Q6ZV80 131 aa8.09□□□□□ -1.11
DDX55-202ENST00000354291 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.11
DDX55-202ENST00000354291 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
DDX55-202ENST00000354291 A6NJY4 79 aa8.08□□□□□ -1.12
DDX55-202ENST00000354291 KRTAP6-3Q3LI67 103 aa8.08□□□□□ -1.12
DDX55-202ENST00000354291 CEND1Q8N111 149 aa8.08□□□□□ -1.12
DDX55-202ENST00000354291 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
DDX55-202ENST00000354291 Q96NJ1 140 aa8.06□□□□□ -1.12
DDX55-202ENST00000354291 H3BMG7 143 aa8.05□□□□□ -1.12
DDX55-202ENST00000354291 FABP2P12104 132 aa8.04□□□□□ -1.12
DDX55-202ENST00000354291 A0A087WSZ3 146 aa8.03□□□□□ -1.12
DDX55-202ENST00000354291 TRBV20-1A0A075B6N2 111 aa8.01□□□□□ -1.13
DDX55-202ENST00000354291 FXYD2P54710 66 aa8.01□□□□□ -1.13
DDX55-202ENST00000354291 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
DDX55-202ENST00000354291 TRIAP1O43715 76 aa8□□□□□ -1.13
DDX55-202ENST00000354291 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
DDX55-202ENST00000354291 NEBP20929 6669 aa8□□□□□ -1.13
DDX55-202ENST00000354291 H3BQ85 93 aa7.99□□□□□ -1.13
DDX55-202ENST00000354291 A8MUU9 505 aa7.98□□□□□ -1.13
DDX55-202ENST00000354291 DNAL4O96015 105 aa7.98□□□□□ -1.13
DDX55-202ENST00000354291 A0A1W2PNM2 257 aa7.96□□□□□ -1.14
DDX55-202ENST00000354291 ANKRD29Q8N6D5 301 aa7.96□□□□□ -1.14
DDX55-202ENST00000354291 ORMDL1Q9P0S3 153 aa7.96□□□□□ -1.14
DDX55-202ENST00000354291 COX6CP09669 75 aa7.95□□□□□ -1.14
DDX55-202ENST00000354291 PSMB2P49721 201 aa7.95□□□□□ -1.14
DDX55-202ENST00000354291 HSD52Q0P140 79 aa7.95□□□□□ -1.14
DDX55-202ENST00000354291 TRBV7-4A0A0J9YYF1 115 aa7.94□□□□□ -1.14
DDX55-202ENST00000354291 TMEM256-PLSCR3K7ERE1 68 aa7.94□□□□□ -1.14
DDX55-202ENST00000354291 FAM236DA0A1B0GTK5 79 aa7.93□□□□□ -1.14
DDX55-202ENST00000354291 FAM236CP0DP71 79 aa7.93□□□□□ -1.14
DDX55-202ENST00000354291 SIGMAR1Q99720 223 aa7.93□□□□□ -1.14
DDX55-202ENST00000354291 DSCR10P59022 87 aa7.92□□□□□ -1.14
DDX55-202ENST00000354291 PYY3Q5JQD4 70 aa7.92□□□□□ -1.14
DDX55-202ENST00000354291 LINC00313P59037 77 aa7.91□□□□□ -1.14
DDX55-202ENST00000354291 IGKV4-1P06312 121 aa7.9□□□□□ -1.14
DDX55-202ENST00000354291 K7ERJ3 54 aa7.89□□□□□ -1.15
DDX55-202ENST00000354291 A0A1B0GV72 72 aa7.88□□□□□ -1.15
DDX55-202ENST00000354291 TRACP01848 142 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms