RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
SKP1-202ENST00000353411 CHTF8P0CG12 524 aa3.31□□□□□ -1.88
SKP1-202ENST00000353411 FAM104AQ969W3 186 aa3.31□□□□□ -1.88
SKP1-202ENST00000353411 SPTBN5Q9NRC6 3674 aaKnown RBP3.31□□□□□ -1.88
SKP1-202ENST00000353411 C8orf17Q9NRJ1 99 aa3.31□□□□□ -1.88
SKP1-202ENST00000353411 A0A087X002 238 aa3.3□□□□□ -1.88
SKP1-202ENST00000353411 CIRBP-AS1Q8TBR5 109 aa3.3□□□□□ -1.88
SKP1-202ENST00000353411 NSD1Q96L73 2696 aaPredicted RBP3.3□□□□□ -1.88
SKP1-202ENST00000353411 LINC01556Q5JQF7 62 aa3.3□□□□□ -1.88
SKP1-202ENST00000353411 LRBAP50851 2863 aa3.3□□□□□ -1.88
SKP1-202ENST00000353411 IGLV1-50A0A075B6I6 118 aa3.3□□□□□ -1.88
SKP1-202ENST00000353411 H3BNG1 76 aa3.3□□□□□ -1.88
SKP1-202ENST00000353411 TACC2O95359 2948 aa3.29□□□□□ -1.88
SKP1-202ENST00000353411 CRYBG3Q68DQ2 2970 aa3.29□□□□□ -1.88
SKP1-202ENST00000353411 A0A1B0GVX0 72 aa3.29□□□□□ -1.88
SKP1-202ENST00000353411 NBEAQ8NFP9 2946 aa3.29□□□□□ -1.88
SKP1-202ENST00000353411 SPEGQ15772 3267 aa3.29□□□□□ -1.88
SKP1-202ENST00000353411 SPINK7P58062 85 aa3.29□□□□□ -1.88
SKP1-202ENST00000353411 Q8NAQ8 132 aa3.29□□□□□ -1.88
SKP1-202ENST00000353411 FLNCQ14315 2725 aa3.29□□□□□ -1.88
SKP1-202ENST00000353411 DMXL2Q8TDJ6 3036 aa3.28□□□□□ -1.88
SKP1-202ENST00000353411 KRTAP21-3Q3LHN1 58 aa3.28□□□□□ -1.88
SKP1-202ENST00000353411 C9orf163Q8N9P6 203 aa3.28□□□□□ -1.88
SKP1-202ENST00000353411 ASPMQ8IZT6 3477 aa3.28□□□□□ -1.89
SKP1-202ENST00000353411 IGLV5-37A0A075B6J1 123 aa3.28□□□□□ -1.89
SKP1-202ENST00000353411 PRR34Q9NV39 138 aa3.28□□□□□ -1.89
SKP1-202ENST00000353411 ZCCHC13Q8WW36 166 aaKnown RBP3.27□□□□□ -1.89
SKP1-202ENST00000353411 COL12A1Q99715 3063 aa3.27□□□□□ -1.89
SKP1-202ENST00000353411 TNRC18O15417 2968 aaPredicted RBP3.26□□□□□ -1.89
SKP1-202ENST00000353411 C15orf56Q8N910 161 aa3.26□□□□□ -1.89
SKP1-202ENST00000353411 ADGRG4Q8IZF6 3080 aa3.26□□□□□ -1.89
SKP1-202ENST00000353411 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
SKP1-202ENST00000353411 LCE6AA0A183 80 aa3.25□□□□□ -1.89
SKP1-202ENST00000353411 HRES1P13985 223 aa3.25□□□□□ -1.89
SKP1-202ENST00000353411 SZT2Q5T011 3432 aa3.25□□□□□ -1.89
SKP1-202ENST00000353411 DCHS2Q6V1P9 2916 aa3.24□□□□□ -1.89
SKP1-202ENST00000353411 WWC2-AS2Q96NR7 200 aa3.24□□□□□ -1.89
SKP1-202ENST00000353411 NBPF19A0A087WUL8 3843 aa3.23□□□□□ -1.89
SKP1-202ENST00000353411 IGSF10Q6WRI0 2623 aa3.23□□□□□ -1.89
SKP1-202ENST00000353411 DMXL1Q9Y485 3027 aa3.23□□□□□ -1.89
SKP1-202ENST00000353411 LAMA5O15230 3695 aa3.23□□□□□ -1.89
SKP1-202ENST00000353411 NF1P21359 2839 aa3.23□□□□□ -1.89
SKP1-202ENST00000353411 CSNK1G2-AS1Q8NCQ2 148 aa3.22□□□□□ -1.89
SKP1-202ENST00000353411 MYO15AQ9UKN7 3530 aa3.22□□□□□ -1.89
SKP1-202ENST00000353411 CNBPP62633 177 aaKnown RBP3.22□□□□□ -1.89
SKP1-202ENST00000353411 NIPBLQ6KC79 2804 aaeCLIP3.22□□□□□ -1.89
SKP1-202ENST00000353411 LINC00612Q8N6U2 182 aa3.21□□□□□ -1.89
SKP1-202ENST00000353411 FAM168BA1KXE4 195 aa3.21□□□□□ -1.9
SKP1-202ENST00000353411 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
SKP1-202ENST00000353411 ATMQ13315 3056 aa3.21□□□□□ -1.9
SKP1-202ENST00000353411 ITPR1Q14643 2758 aa3.21□□□□□ -1.9
SKP1-202ENST00000353411 C19orf73Q9NVV2 129 aa3.21□□□□□ -1.9
SKP1-202ENST00000353411 EYSQ5T1H1 3165 aa3.21□□□□□ -1.9
SKP1-202ENST00000353411 DNAH10OSP0CZ25 163 aa3.2□□□□□ -1.9
SKP1-202ENST00000353411 UBR5O95071 2799 aaPredicted RBP3.2□□□□□ -1.9
SKP1-202ENST00000353411 A0A1B0GU33 70 aa3.19□□□□□ -1.9
SKP1-202ENST00000353411 MMP24-AS1A0A0U1RRL7 71 aa3.19□□□□□ -1.9
SKP1-202ENST00000353411 TENM1Q9UKZ4 2725 aa3.19□□□□□ -1.9
SKP1-202ENST00000353411 SPENQ96T58 3664 aaKnown RBP3.19□□□□□ -1.9
SKP1-202ENST00000353411 IGLV5-52A0A0A0MRZ9 124 aa3.19□□□□□ -1.9
SKP1-202ENST00000353411 A0A1W2PPR1 153 aa3.18□□□□□ -1.9
SKP1-202ENST00000353411 LY6G6CO95867 125 aa3.18□□□□□ -1.9
SKP1-202ENST00000353411 CAMK2N1Q7Z7J9 78 aa3.18□□□□□ -1.9
SKP1-202ENST00000353411 IGLV7-43P04211 117 aa3.17□□□□□ -1.9
SKP1-202ENST00000353411 Q6ZR54 194 aa3.17□□□□□ -1.9
SKP1-202ENST00000353411 APLNQ9ULZ1 77 aa3.17□□□□□ -1.9
SKP1-202ENST00000353411 ROMO1P60602 79 aa3.17□□□□□ -1.9
SKP1-202ENST00000353411 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
SKP1-202ENST00000353411 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
SKP1-202ENST00000353411 A0A1W2PNN7 141 aa3.17□□□□□ -1.9
SKP1-202ENST00000353411 CFAP47Q6ZTR5 3102 aa3.16□□□□□ -1.9
SKP1-202ENST00000353411 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
SKP1-202ENST00000353411 GIG44P09565 113 aaPredicted RBP3.16□□□□□ -1.9
SKP1-202ENST00000353411 KRTAP10-9P60411 292 aa3.16□□□□□ -1.9
SKP1-202ENST00000353411 SPRR1AP35321 89 aa3.16□□□□□ -1.9
SKP1-202ENST00000353411 Q8NDZ9 215 aa3.16□□□□□ -1.9
SKP1-202ENST00000353411 CELSR2Q9HCU4 2923 aa3.15□□□□□ -1.9
SKP1-202ENST00000353411 A8MU10 97 aa3.15□□□□□ -1.9
SKP1-202ENST00000353411 KRTAP29-1A8MX34 341 aaPredicted RBP3.15□□□□□ -1.9
SKP1-202ENST00000353411 KRTAP24-1Q3LI83 254 aa3.15□□□□□ -1.91
SKP1-202ENST00000353411 Q96NJ1 140 aa3.15□□□□□ -1.91
SKP1-202ENST00000353411 SPACA4Q8TDM5 124 aa3.15□□□□□ -1.91
SKP1-202ENST00000353411 ZFHX3Q15911 3703 aa3.13□□□□□ -1.91
SKP1-202ENST00000353411 RTL8CO15255 209 aa3.13□□□□□ -1.91
SKP1-202ENST00000353411 RELNP78509 3460 aa3.13□□□□□ -1.91
SKP1-202ENST00000353411 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
SKP1-202ENST00000353411 ZNF861PO60384 105 aa3.11□□□□□ -1.91
SKP1-202ENST00000353411 SPRR1BP22528 89 aa3.11□□□□□ -1.91
SKP1-202ENST00000353411 CELSR1Q9NYQ6 3014 aa3.1□□□□□ -1.91
SKP1-202ENST00000353411 TGP01266 2768 aa3.1□□□□□ -1.91
SKP1-202ENST00000353411 SMR3AQ99954 134 aa3.09□□□□□ -1.91
SKP1-202ENST00000353411 Q8N1X5 172 aa3.09□□□□□ -1.91
SKP1-202ENST00000353411 HIVEP1P15822 2718 aa3.09□□□□□ -1.91
SKP1-202ENST00000353411 Q5W150 140 aa3.09□□□□□ -1.92
SKP1-202ENST00000353411 A0A0D9SG42 100 aa3.09□□□□□ -1.92
SKP1-202ENST00000353411 NOTCH2NLQ7Z3S9 236 aa3.08□□□□□ -1.92
SKP1-202ENST00000353411 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
SKP1-202ENST00000353411 RPL37P61927 97 aaKnown RBP3.08□□□□□ -1.92
SKP1-202ENST00000353411 KRTAP26-1Q6PEX3 210 aa3.07□□□□□ -1.92
SKP1-202ENST00000353411 PDZD2O15018 2839 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms