RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 SPANXA2-OT1Q8N9U9 137 aa11.85□□□□□ -0.51
UBE3C-201ENST00000348165 VPS13AQ96RL7 3174 aa11.84□□□□□ -0.51
UBE3C-201ENST00000348165 IGSF10Q6WRI0 2623 aa11.83□□□□□ -0.52
UBE3C-201ENST00000348165 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
UBE3C-201ENST00000348165 IGLV5-37A0A075B6J1 123 aa11.79□□□□□ -0.52
UBE3C-201ENST00000348165 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.77□□□□□ -0.53
UBE3C-201ENST00000348165 OCR1Q9BZK8 76 aa11.76□□□□□ -0.53
UBE3C-201ENST00000348165 BAHCC1Q9P281 2608 aa11.76□□□□□ -0.53
UBE3C-201ENST00000348165 IGLV5-48A0A075B6I7 105 aa11.76□□□□□ -0.53
UBE3C-201ENST00000348165 H3BS24 57 aa11.76□□□□□ -0.53
UBE3C-201ENST00000348165 FP248Q71RG6 208 aaPredicted RBP11.75□□□□□ -0.53
UBE3C-201ENST00000348165 CRIPTQ9P021 101 aa11.74□□□□□ -0.53
UBE3C-201ENST00000348165 NBEAL2Q6ZNJ1 2754 aa11.74□□□□□ -0.53
UBE3C-201ENST00000348165 CYSTM1Q9H1C7 97 aa11.73□□□□□ -0.53
UBE3C-201ENST00000348165 CDH23Q9H251 3354 aa11.71□□□□□ -0.53
UBE3C-201ENST00000348165 FRYQ5TBA9 3013 aa11.69□□□□□ -0.54
UBE3C-201ENST00000348165 LINC01554Q52M75 96 aa11.67□□□□□ -0.54
UBE3C-201ENST00000348165 NSD1Q96L73 2696 aaPredicted RBP11.66□□□□□ -0.54
UBE3C-201ENST00000348165 FAM229BQ4G0N7 80 aa11.66□□□□□ -0.54
UBE3C-201ENST00000348165 Q75L30 129 aa11.65□□□□□ -0.54
UBE3C-201ENST00000348165 Q8N1X5 172 aa11.64□□□□□ -0.55
UBE3C-201ENST00000348165 PRR26Q8N8Z3 221 aa11.63□□□□□ -0.55
UBE3C-201ENST00000348165 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
UBE3C-201ENST00000348165 Q8NDZ9 215 aa11.6□□□□□ -0.55
UBE3C-201ENST00000348165 TACC2O95359 2948 aa11.59□□□□□ -0.55
UBE3C-201ENST00000348165 FREM2Q5SZK8 3169 aa11.59□□□□□ -0.55
UBE3C-201ENST00000348165 OXTP01178 125 aa11.57□□□□□ -0.56
UBE3C-201ENST00000348165 STAB2Q8WWQ8 2551 aa11.56□□□□□ -0.56
UBE3C-201ENST00000348165 FLNCQ14315 2725 aa11.55□□□□□ -0.56
UBE3C-201ENST00000348165 Q8N9P0 234 aaPredicted RBP11.55□□□□□ -0.56
UBE3C-201ENST00000348165 CELSR3Q9NYQ7 3312 aa11.54□□□□□ -0.56
UBE3C-201ENST00000348165 REV3LO60673 3130 aa11.54□□□□□ -0.56
UBE3C-201ENST00000348165 ITPR1Q14643 2758 aa11.54□□□□□ -0.56
UBE3C-201ENST00000348165 PRAC1Q96KF2 57 aa11.53□□□□□ -0.56
UBE3C-201ENST00000348165 KRTAP1-5Q9BYS1 174 aa11.52□□□□□ -0.57
UBE3C-201ENST00000348165 IGLV7-46A0A075B6I9 117 aa11.51□□□□□ -0.57
UBE3C-201ENST00000348165 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
UBE3C-201ENST00000348165 Q5VV11 94 aa11.49□□□□□ -0.57
UBE3C-201ENST00000348165 LINC01558Q9Y6Z2 57 aa11.48□□□□□ -0.57
UBE3C-201ENST00000348165 ATMQ13315 3056 aa11.47□□□□□ -0.57
UBE3C-201ENST00000348165 DMXL2Q8TDJ6 3036 aa11.47□□□□□ -0.57
UBE3C-201ENST00000348165 SPRR1AP35321 89 aa11.46□□□□□ -0.58
UBE3C-201ENST00000348165 SZT2Q5T011 3432 aa11.45□□□□□ -0.58
UBE3C-201ENST00000348165 FRYLO94915 3013 aa11.45□□□□□ -0.58
UBE3C-201ENST00000348165 A0A0D9SG42 100 aa11.44□□□□□ -0.58
UBE3C-201ENST00000348165 Q6ZSA8 131 aa11.44□□□□□ -0.58
UBE3C-201ENST00000348165 ITPR2Q14571 2701 aa11.43□□□□□ -0.58
UBE3C-201ENST00000348165 COL12A1Q99715 3063 aa11.42□□□□□ -0.58
UBE3C-201ENST00000348165 KALRNO60229 2985 aa11.37□□□□□ -0.59
UBE3C-201ENST00000348165 KRTAP26-1Q6PEX3 210 aa11.37□□□□□ -0.59
UBE3C-201ENST00000348165 LAMA1P25391 3075 aa11.36□□□□□ -0.59
UBE3C-201ENST00000348165 DMBT1Q9UGM3 2413 aaPredicted RBP11.35□□□□□ -0.59
UBE3C-201ENST00000348165 HRES1P13985 223 aa11.34□□□□□ -0.59
UBE3C-201ENST00000348165 MMP24-AS1A0A0U1RRL7 71 aa11.33□□□□□ -0.59
UBE3C-201ENST00000348165 LUZP6Q538Z0 58 aa11.33□□□□□ -0.59
UBE3C-201ENST00000348165 BOD1L1Q8NFC6 3051 aa11.33□□□□□ -0.6
UBE3C-201ENST00000348165 DNAH14Q0VDD8 3507 aa11.33□□□□□ -0.6
UBE3C-201ENST00000348165 CSAG1Q6PB30 78 aa11.32□□□□□ -0.6
UBE3C-201ENST00000348165 VCANP13611 3396 aa11.32□□□□□ -0.6
UBE3C-201ENST00000348165 SPINK7P58062 85 aa11.3□□□□□ -0.6
UBE3C-201ENST00000348165 SPRR1BP22528 89 aa11.29□□□□□ -0.6
UBE3C-201ENST00000348165 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
UBE3C-201ENST00000348165 KRTAP10-2P60368 255 aa11.28□□□□□ -0.6
UBE3C-201ENST00000348165 KRTAP10-1P60331 282 aa11.28□□□□□ -0.6
UBE3C-201ENST00000348165 ADGRG4Q8IZF6 3080 aa11.28□□□□□ -0.6
UBE3C-201ENST00000348165 LINC00472Q9H8W2 130 aa11.25□□□□□ -0.61
UBE3C-201ENST00000348165 ASH1LQ9NR48 2969 aaKnown RBP11.24□□□□□ -0.61
UBE3C-201ENST00000348165 ZCCHC13Q8WW36 166 aaKnown RBP11.24□□□□□ -0.61
UBE3C-201ENST00000348165 A0A1B0GU33 70 aa11.24□□□□□ -0.61
UBE3C-201ENST00000348165 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
UBE3C-201ENST00000348165 LCE6AA0A183 80 aa11.22□□□□□ -0.61
UBE3C-201ENST00000348165 HIVEP1P15822 2718 aa11.22□□□□□ -0.61
UBE3C-201ENST00000348165 M0R2T5 61 aa11.19□□□□□ -0.62
UBE3C-201ENST00000348165 PANO1I0J062 215 aa11.19□□□□□ -0.62
UBE3C-201ENST00000348165 TENM4Q6N022 2769 aa11.18□□□□□ -0.62
UBE3C-201ENST00000348165 Q5VSD8 79 aa11.18□□□□□ -0.62
UBE3C-201ENST00000348165 KMT2BQ9UMN6 2715 aaPredicted RBP11.16□□□□□ -0.62
UBE3C-201ENST00000348165 DMAC1Q96GE9 116 aa11.16□□□□□ -0.62
UBE3C-201ENST00000348165 COL6A3P12111 3177 aa11.15□□□□□ -0.63
UBE3C-201ENST00000348165 Q5W150 140 aa11.14□□□□□ -0.63
UBE3C-201ENST00000348165 ZZEF1O43149 2961 aa11.13□□□□□ -0.63
UBE3C-201ENST00000348165 LRBAP50851 2863 aa11.11□□□□□ -0.63
UBE3C-201ENST00000348165 CAMK2N1Q7Z7J9 78 aa11.09□□□□□ -0.63
UBE3C-201ENST00000348165 CELSR2Q9HCU4 2923 aa11.09□□□□□ -0.63
UBE3C-201ENST00000348165 A0A0A0MQY5 61 aa11.08□□□□□ -0.64
UBE3C-201ENST00000348165 Q6ZR54 194 aa11.07□□□□□ -0.64
UBE3C-201ENST00000348165 CRYBG3Q68DQ2 2970 aa11.07□□□□□ -0.64
UBE3C-201ENST00000348165 KRTAP4-16G5E9R7 235 aaPredicted RBP11.04□□□□□ -0.64
UBE3C-201ENST00000348165 ASB16-AS1Q495Z4 193 aa11.04□□□□□ -0.64
UBE3C-201ENST00000348165 NIPBLQ6KC79 2804 aaeCLIP11.03□□□□□ -0.64
UBE3C-201ENST00000348165 CFAP47Q6ZTR5 3102 aa11.02□□□□□ -0.64
UBE3C-201ENST00000348165 S4R3F8 94 aa11.01□□□□□ -0.65
UBE3C-201ENST00000348165 SPTBN5Q9NRC6 3674 aaKnown RBP11□□□□□ -0.65
UBE3C-201ENST00000348165 LINC00483Q53H64 154 aa11□□□□□ -0.65
UBE3C-201ENST00000348165 APCP25054 2843 aa10.98□□□□□ -0.65
UBE3C-201ENST00000348165 EYSQ5T1H1 3165 aa10.97□□□□□ -0.65
UBE3C-201ENST00000348165 A0A087X002 238 aa10.96□□□□□ -0.65
UBE3C-201ENST00000348165 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
UBE3C-201ENST00000348165 ZANQ9Y493 2812 aa10.94□□□□□ -0.66
UBE3C-201ENST00000348165 A6NN06 94 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms