RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 DNAH10OSP0CZ25 163 aa11.3□□□□□ -0.6
VHL-202ENST00000345392 IGFL1Q6UW32 110 aa11.28□□□□□ -0.6
VHL-202ENST00000345392 CSMD3Q7Z407 3707 aa11.28□□□□□ -0.6
VHL-202ENST00000345392 Q1T7F1 81 aa11.28□□□□□ -0.6
VHL-202ENST00000345392 DNAH10Q8IVF4 4471 aa11.27□□□□□ -0.6
VHL-202ENST00000345392 REG3GQ6UW15 175 aa11.27□□□□□ -0.61
VHL-202ENST00000345392 RPL37AP61513 92 aaKnown RBP11.26□□□□□ -0.61
VHL-202ENST00000345392 A0A087WSZ3 146 aa11.25□□□□□ -0.61
VHL-202ENST00000345392 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
VHL-202ENST00000345392 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
VHL-202ENST00000345392 PRLHP81277 87 aa11.24□□□□□ -0.61
VHL-202ENST00000345392 DNAH3Q8TD57 4116 aa11.24□□□□□ -0.61
VHL-202ENST00000345392 DNAH1Q9P2D7 4330 aa11.24□□□□□ -0.61
VHL-202ENST00000345392 TRAV22A0A0B4J277 110 aa11.23□□□□□ -0.61
VHL-202ENST00000345392 DNHD1Q96M86 4753 aa11.23□□□□□ -0.61
VHL-202ENST00000345392 CYP4F30PQ9H0H9 118 aa11.22□□□□□ -0.61
VHL-202ENST00000345392 LINC00208Q96KT6 92 aa11.21□□□□□ -0.61
VHL-202ENST00000345392 V9GYY9 64 aa11.2□□□□□ -0.62
VHL-202ENST00000345392 MP68P56378 58 aa11.19□□□□□ -0.62
VHL-202ENST00000345392 HUWE1Q7Z6Z7 4374 aaKnown RBP11.19□□□□□ -0.62
VHL-202ENST00000345392 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
VHL-202ENST00000345392 PRR15Q8IV56 129 aa11.17□□□□□ -0.62
VHL-202ENST00000345392 NDUFB1O75438 58 aa11.17□□□□□ -0.62
VHL-202ENST00000345392 A8MUN3 132 aa11.16□□□□□ -0.62
VHL-202ENST00000345392 STAB2Q8WWQ8 2551 aa11.14□□□□□ -0.63
VHL-202ENST00000345392 B9D2Q9BPU9 175 aa11.13□□□□□ -0.63
VHL-202ENST00000345392 A0A096LNI7 61 aa11.13□□□□□ -0.63
VHL-202ENST00000345392 TENM2Q9NT68 2774 aa11.13□□□□□ -0.63
VHL-202ENST00000345392 KRTAP29-1A8MX34 341 aaPredicted RBP11.12□□□□□ -0.63
VHL-202ENST00000345392 A8MU10 97 aa11.12□□□□□ -0.63
VHL-202ENST00000345392 H0Y9P7 68 aa11.12□□□□□ -0.63
VHL-202ENST00000345392 UBE2AP49459 152 aa11.12□□□□□ -0.63
VHL-202ENST00000345392 DNAH9Q9NYC9 4486 aa11.11□□□□□ -0.63
VHL-202ENST00000345392 CASC2Q6XLA1 102 aa11.11□□□□□ -0.63
VHL-202ENST00000345392 COL7A1Q02388 2944 aa11.11□□□□□ -0.63
VHL-202ENST00000345392 IGLV8-61A0A075B6I0 122 aa11.09□□□□□ -0.63
VHL-202ENST00000345392 CNBPP62633 177 aaKnown RBP11.08□□□□□ -0.64
VHL-202ENST00000345392 KRTAP11-1Q8IUC1 163 aa11.07□□□□□ -0.64
VHL-202ENST00000345392 SEC61GP60059 68 aa11.06□□□□□ -0.64
VHL-202ENST00000345392 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
VHL-202ENST00000345392 PMAIP1Q13794 54 aa11.05□□□□□ -0.64
VHL-202ENST00000345392 Q5VV11 94 aa11.05□□□□□ -0.64
VHL-202ENST00000345392 C16orf90A8MZG2 172 aa11.04□□□□□ -0.64
VHL-202ENST00000345392 DNAH7Q8WXX0 4024 aa11.03□□□□□ -0.64
VHL-202ENST00000345392 PHF5AQ7RTV0 110 aaKnown RBP11.03□□□□□ -0.64
VHL-202ENST00000345392 K7EIL1 84 aa11.02□□□□□ -0.64
VHL-202ENST00000345392 CHTF8P0CG12 524 aa11.02□□□□□ -0.64
VHL-202ENST00000345392 A8MWP4 228 aa11.02□□□□□ -0.65
VHL-202ENST00000345392 Q8N9P0 234 aaPredicted RBP11.02□□□□□ -0.65
VHL-202ENST00000345392 LINC00472Q9H8W2 130 aa11.01□□□□□ -0.65
VHL-202ENST00000345392 SPANXA2-OT1Q8N9U9 137 aa11.01□□□□□ -0.65
VHL-202ENST00000345392 H0Y9J4 135 aa11□□□□□ -0.65
VHL-202ENST00000345392 CHKB-CPT1BH3BT56 60 aa10.99□□□□□ -0.65
VHL-202ENST00000345392 PRR15LQ9BU68 103 aa10.97□□□□□ -0.65
VHL-202ENST00000345392 H3BPC8 53 aa10.97□□□□□ -0.65
VHL-202ENST00000345392 C9orf163Q8N9P6 203 aa10.97□□□□□ -0.65
VHL-202ENST00000345392 MMP24-AS1A0A0U1RRL7 71 aa10.93□□□□□ -0.66
VHL-202ENST00000345392 LIMD2Q9BT23 127 aa10.93□□□□□ -0.66
VHL-202ENST00000345392 PCOTHQ58A44 107 aa10.92□□□□□ -0.66
VHL-202ENST00000345392 SPRR1BP22528 89 aa10.92□□□□□ -0.66
VHL-202ENST00000345392 COA5Q86WW8 74 aa10.91□□□□□ -0.66
VHL-202ENST00000345392 MEGF8Q7Z7M0 2845 aa10.91□□□□□ -0.66
VHL-202ENST00000345392 KRTAP21-3Q3LHN1 58 aa10.91□□□□□ -0.66
VHL-202ENST00000345392 UBE2DNLQ8IWF7 75 aa10.89□□□□□ -0.67
VHL-202ENST00000345392 SPTSSBQ8NFR3 76 aa10.87□□□□□ -0.67
VHL-202ENST00000345392 PLECQ15149 4684 aaKnown RBP10.87□□□□□ -0.67
VHL-202ENST00000345392 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
VHL-202ENST00000345392 IGLV9-49A0A0B4J1Y8 123 aa10.84□□□□□ -0.67
VHL-202ENST00000345392 LCA10Q71F78 164 aa10.84□□□□□ -0.67
VHL-202ENST00000345392 PRKDCP78527 4128 aaKnown RBP10.83□□□□□ -0.68
VHL-202ENST00000345392 A6NED7 52 aa10.83□□□□□ -0.68
VHL-202ENST00000345392 CD164Q04900 197 aa10.83□□□□□ -0.68
VHL-202ENST00000345392 PANO1I0J062 215 aa10.81□□□□□ -0.68
VHL-202ENST00000345392 Q96NJ1 140 aa10.81□□□□□ -0.68
VHL-202ENST00000345392 TGP01266 2768 aa10.8□□□□□ -0.68
VHL-202ENST00000345392 SPAG11AQ6PDA7 123 aa10.8□□□□□ -0.68
VHL-202ENST00000345392 Q75L30 129 aa10.8□□□□□ -0.68
VHL-202ENST00000345392 NDUFS5O43920 106 aa10.79□□□□□ -0.68
VHL-202ENST00000345392 LOC101927531A0A1B0GV80 90 aa10.78□□□□□ -0.68
VHL-202ENST00000345392 APLNQ9ULZ1 77 aa10.77□□□□□ -0.69
VHL-202ENST00000345392 IGHV6-1A0A0B4J1U7 121 aa10.76□□□□□ -0.69
VHL-202ENST00000345392 C8orf17Q9NRJ1 99 aa10.76□□□□□ -0.69
VHL-202ENST00000345392 FBN3Q75N90 2809 aa10.75□□□□□ -0.69
VHL-202ENST00000345392 KRTAP13-1Q8IUC0 172 aa10.75□□□□□ -0.69
VHL-202ENST00000345392 ASB16-AS1Q495Z4 193 aa10.74□□□□□ -0.69
VHL-202ENST00000345392 C14orf177Q52M58 125 aa10.74□□□□□ -0.69
VHL-202ENST00000345392 TP53AIP1Q9HCN2 124 aa10.74□□□□□ -0.69
VHL-202ENST00000345392 MOBPQ13875 183 aa10.73□□□□□ -0.69
VHL-202ENST00000345392 ATP11AUNQ6ZP68 121 aa10.71□□□□□ -0.69
VHL-202ENST00000345392 Q6ZR54 194 aa10.71□□□□□ -0.69
VHL-202ENST00000345392 FRAS1Q86XX4 4008 aa10.7□□□□□ -0.7
VHL-202ENST00000345392 STARD9Q9P2P6 4700 aa10.7□□□□□ -0.7
VHL-202ENST00000345392 A0A087X002 238 aa10.7□□□□□ -0.7
VHL-202ENST00000345392 NOTCH2NLQ7Z3S9 236 aa10.7□□□□□ -0.7
VHL-202ENST00000345392 DYNC2H1Q8NCM8 4307 aaKnown RBP10.69□□□□□ -0.7
VHL-202ENST00000345392 KTN1-AS1Q86SY8 53 aa10.69□□□□□ -0.7
VHL-202ENST00000345392 HRES1P13985 223 aa10.69□□□□□ -0.7
VHL-202ENST00000345392 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
VHL-202ENST00000345392 LINC01558Q9Y6Z2 57 aa10.68□□□□□ -0.7
VHL-202ENST00000345392 A0A1B0GVX0 72 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms