RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 DSCR10P59022 87 aa5□□□□□ -1.61
LIN28B-201ENST00000345080 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
LIN28B-201ENST00000345080 A0A087WTM6 91 aa4.99□□□□□ -1.61
LIN28B-201ENST00000345080 A0A096LNT2 108 aa4.99□□□□□ -1.61
LIN28B-201ENST00000345080 IGFL1Q6UW32 110 aa4.99□□□□□ -1.61
LIN28B-201ENST00000345080 A0A1B0GU33 70 aa4.99□□□□□ -1.61
LIN28B-201ENST00000345080 M0R2T5 61 aa4.98□□□□□ -1.61
LIN28B-201ENST00000345080 ABCA12Q86UK0 2595 aa4.98□□□□□ -1.61
LIN28B-201ENST00000345080 IGLV1-50A0A075B6I6 118 aa4.98□□□□□ -1.61
LIN28B-201ENST00000345080 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
LIN28B-201ENST00000345080 LOC400499M0QZD8 3231 aa4.98□□□□□ -1.61
LIN28B-201ENST00000345080 PRR34Q9NV39 138 aa4.98□□□□□ -1.61
LIN28B-201ENST00000345080 USP9XQ93008 2570 aaPredicted RBP4.97□□□□□ -1.61
LIN28B-201ENST00000345080 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
LIN28B-201ENST00000345080 JMJD1CQ15652 2540 aa4.97□□□□□ -1.61
LIN28B-201ENST00000345080 BSNQ9UPA5 3926 aa4.97□□□□□ -1.61
LIN28B-201ENST00000345080 FRYQ5TBA9 3013 aa4.97□□□□□ -1.61
LIN28B-201ENST00000345080 A0A1B0GVX0 72 aa4.96□□□□□ -1.61
LIN28B-201ENST00000345080 IGLV5-37A0A075B6J1 123 aa4.95□□□□□ -1.62
LIN28B-201ENST00000345080 C15orf56Q8N910 161 aa4.95□□□□□ -1.62
LIN28B-201ENST00000345080 SMR3BP02814 79 aaPredicted RBP4.94□□□□□ -1.62
LIN28B-201ENST00000345080 KRTAP1-3Q8IUG1 177 aa4.94□□□□□ -1.62
LIN28B-201ENST00000345080 ADM2Q7Z4H4 148 aa4.93□□□□□ -1.62
LIN28B-201ENST00000345080 ANKRD17O75179 2603 aaKnown RBP4.93□□□□□ -1.62
LIN28B-201ENST00000345080 MTORP42345 2549 aa4.93□□□□□ -1.62
LIN28B-201ENST00000345080 USP9YO00507 2555 aaPredicted RBP4.93□□□□□ -1.62
LIN28B-201ENST00000345080 IGLV7-43P04211 117 aa4.93□□□□□ -1.62
LIN28B-201ENST00000345080 KRTAP1-1Q07627 177 aa4.91□□□□□ -1.62
LIN28B-201ENST00000345080 FAM168BA1KXE4 195 aa4.91□□□□□ -1.62
LIN28B-201ENST00000345080 HRES1P13985 223 aa4.91□□□□□ -1.62
LIN28B-201ENST00000345080 Q5VSD8 79 aa4.9□□□□□ -1.62
LIN28B-201ENST00000345080 C9orf92A6NGG3 77 aa4.9□□□□□ -1.62
LIN28B-201ENST00000345080 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.62
LIN28B-201ENST00000345080 GIG44P09565 113 aaPredicted RBP4.89□□□□□ -1.63
LIN28B-201ENST00000345080 Q6ZSA8 131 aa4.89□□□□□ -1.63
LIN28B-201ENST00000345080 KRTAP10-3P60369 221 aa4.89□□□□□ -1.63
LIN28B-201ENST00000345080 CNBPP62633 177 aaKnown RBP4.88□□□□□ -1.63
LIN28B-201ENST00000345080 EPG5Q9HCE0 2579 aa4.87□□□□□ -1.63
LIN28B-201ENST00000345080 PIEZO2Q9H5I5 2752 aa4.87□□□□□ -1.63
LIN28B-201ENST00000345080 ROMO1P60602 79 aa4.86□□□□□ -1.63
LIN28B-201ENST00000345080 MMP24-AS1A0A0U1RRL7 71 aa4.85□□□□□ -1.63
LIN28B-201ENST00000345080 ZNF861PO60384 105 aa4.85□□□□□ -1.63
LIN28B-201ENST00000345080 A8MU10 97 aa4.84□□□□□ -1.63
LIN28B-201ENST00000345080 CHD8Q9HCK8 2581 aa4.84□□□□□ -1.63
LIN28B-201ENST00000345080 Q6ZR54 194 aa4.83□□□□□ -1.64
LIN28B-201ENST00000345080 BOD1L1Q8NFC6 3051 aa4.83□□□□□ -1.64
LIN28B-201ENST00000345080 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
LIN28B-201ENST00000345080 ZFHX3Q15911 3703 aa4.82□□□□□ -1.64
LIN28B-201ENST00000345080 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
LIN28B-201ENST00000345080 ATMQ13315 3056 aa4.82□□□□□ -1.64
LIN28B-201ENST00000345080 CR1P17927 2039 aa4.81□□□□□ -1.64
LIN28B-201ENST00000345080 KRTAP29-1A8MX34 341 aaPredicted RBP4.81□□□□□ -1.64
LIN28B-201ENST00000345080 ZZEF1O43149 2961 aa4.81□□□□□ -1.64
LIN28B-201ENST00000345080 SPRR1AP35321 89 aa4.8□□□□□ -1.64
LIN28B-201ENST00000345080 TNP2Q05952 138 aa4.8□□□□□ -1.64
LIN28B-201ENST00000345080 SMG1Q96Q15 3661 aaKnown RBP4.8□□□□□ -1.64
LIN28B-201ENST00000345080 H1FX-AS1Q4G0G2 97 aa4.8□□□□□ -1.64
LIN28B-201ENST00000345080 DMXL2Q8TDJ6 3036 aa4.8□□□□□ -1.64
LIN28B-201ENST00000345080 NOTCH2NLQ7Z3S9 236 aa4.79□□□□□ -1.64
LIN28B-201ENST00000345080 NBEAQ8NFP9 2946 aa4.79□□□□□ -1.64
LIN28B-201ENST00000345080 AKAP13Q12802 2813 aa4.79□□□□□ -1.64
LIN28B-201ENST00000345080 ZNF292O60281 2723 aa4.79□□□□□ -1.64
LIN28B-201ENST00000345080 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
LIN28B-201ENST00000345080 SPRR1BP22528 89 aa4.77□□□□□ -1.65
LIN28B-201ENST00000345080 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
LIN28B-201ENST00000345080 RELNP78509 3460 aa4.75□□□□□ -1.65
LIN28B-201ENST00000345080 Q8NDZ9 215 aa4.73□□□□□ -1.65
LIN28B-201ENST00000345080 PLAC4Q8WY50 150 aa4.73□□□□□ -1.65
LIN28B-201ENST00000345080 USP24Q9UPU5 2620 aa4.72□□□□□ -1.65
LIN28B-201ENST00000345080 KALRNO60229 2985 aa4.72□□□□□ -1.65
LIN28B-201ENST00000345080 C20orf166-AS1Q96NR2 134 aa4.72□□□□□ -1.65
LIN28B-201ENST00000345080 FASNP49327 2511 aaKnown RBP4.72□□□□□ -1.65
LIN28B-201ENST00000345080 PLAC8Q9NZF1 115 aa4.7□□□□□ -1.66
LIN28B-201ENST00000345080 MGAQ8IWI9 3026 aa4.7□□□□□ -1.66
LIN28B-201ENST00000345080 DSPP15924 2871 aaKnown RBP4.69□□□□□ -1.66
LIN28B-201ENST00000345080 VPS13CQ709C8 3753 aa4.69□□□□□ -1.66
LIN28B-201ENST00000345080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
LIN28B-201ENST00000345080 STAB2Q8WWQ8 2551 aa4.68□□□□□ -1.66
LIN28B-201ENST00000345080 IGF2RP11717 2491 aa4.67□□□□□ -1.66
LIN28B-201ENST00000345080 ITPR1Q14643 2758 aa4.67□□□□□ -1.66
LIN28B-201ENST00000345080 HECTD1Q9ULT8 2610 aa4.67□□□□□ -1.66
LIN28B-201ENST00000345080 A8MUU9 505 aa4.66□□□□□ -1.66
LIN28B-201ENST00000345080 Q5W150 140 aa4.66□□□□□ -1.66
LIN28B-201ENST00000345080 KRTAP26-1Q6PEX3 210 aa4.66□□□□□ -1.66
LIN28B-201ENST00000345080 R4GN34 69 aa4.63□□□□□ -1.67
LIN28B-201ENST00000345080 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
LIN28B-201ENST00000345080 PRRC2CQ9Y520 2896 aaKnown RBP4.62□□□□□ -1.67
LIN28B-201ENST00000345080 DCHS2Q6V1P9 2916 aa4.61□□□□□ -1.67
LIN28B-201ENST00000345080 MGAM2Q2M2H8 2515 aa4.61□□□□□ -1.67
LIN28B-201ENST00000345080 COL12A1Q99715 3063 aa4.59□□□□□ -1.67
LIN28B-201ENST00000345080 CSMD1Q96PZ7 3565 aa4.59□□□□□ -1.68
LIN28B-201ENST00000345080 PANO1I0J062 215 aa4.58□□□□□ -1.68
LIN28B-201ENST00000345080 CSMD2Q7Z408 3487 aa4.58□□□□□ -1.68
LIN28B-201ENST00000345080 ADGRG4Q8IZF6 3080 aa4.58□□□□□ -1.68
LIN28B-201ENST00000345080 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
LIN28B-201ENST00000345080 ATRQ13535 2644 aa4.57□□□□□ -1.68
LIN28B-201ENST00000345080 SVEP1Q4LDE5 3571 aa4.57□□□□□ -1.68
LIN28B-201ENST00000345080 S4R3F8 94 aa4.57□□□□□ -1.68
LIN28B-201ENST00000345080 M0QZ58 72 aa4.55□□□□□ -1.68
LIN28B-201ENST00000345080 NBPF19A0A087WUL8 3843 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms