RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
SMARCB1-202ENST00000344921 PPDPFLQ8WWR9 84 aa12.23□□□□□ -0.45
SMARCB1-202ENST00000344921 PRO1854Q9UHT4 67 aa12.23□□□□□ -0.45
SMARCB1-202ENST00000344921 SLC25A20O43772 301 aa12.22□□□□□ -0.45
SMARCB1-202ENST00000344921 PSMB2P49721 201 aa12.22□□□□□ -0.45
SMARCB1-202ENST00000344921 SMCPP49901 116 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-202ENST00000344921 Q1RN00 199 aa12.22□□□□□ -0.45
SMARCB1-202ENST00000344921 MTURNQ8N3F0 131 aa12.21□□□□□ -0.45
SMARCB1-202ENST00000344921 IGLV9-49A0A0B4J1Y8 123 aa12.2□□□□□ -0.46
SMARCB1-202ENST00000344921 DEFB105AQ8NG35 78 aa12.2□□□□□ -0.46
SMARCB1-202ENST00000344921 TCL1BO95988 128 aa12.17□□□□□ -0.46
SMARCB1-202ENST00000344921 LINC00304Q8N9R0 145 aa12.17□□□□□ -0.46
SMARCB1-202ENST00000344921 LINC00575Q6W349 94 aa12.17□□□□□ -0.46
SMARCB1-202ENST00000344921 MOBPQ13875 183 aa12.15□□□□□ -0.46
SMARCB1-202ENST00000344921 CDIP1Q9H305 208 aa12.15□□□□□ -0.46
SMARCB1-202ENST00000344921 hADV29S1A0JD25 119 aa12.14□□□□□ -0.47
SMARCB1-202ENST00000344921 SCGB1C2P0DMR2 95 aa12.14□□□□□ -0.47
SMARCB1-202ENST00000344921 C9orf153Q5TBE3 101 aa12.14□□□□□ -0.47
SMARCB1-202ENST00000344921 TEX49A0A1B0GTD5 131 aa12.13□□□□□ -0.47
SMARCB1-202ENST00000344921 SPRR1BP22528 89 aa12.13□□□□□ -0.47
SMARCB1-202ENST00000344921 Q8NBF4 154 aa12.12□□□□□ -0.47
SMARCB1-202ENST00000344921 LAMTOR3Q9UHA4 124 aa12.12□□□□□ -0.47
SMARCB1-202ENST00000344921 C4orf48Q5BLP8 95 aa12.11□□□□□ -0.47
SMARCB1-202ENST00000344921 H0YGX0 51 aa12.1□□□□□ -0.47
SMARCB1-202ENST00000344921 ATXN8Q156A1 80 aa12.1□□□□□ -0.47
SMARCB1-202ENST00000344921 SNCGO76070 127 aa12.09□□□□□ -0.47
SMARCB1-202ENST00000344921 SSBP3-AS1Q7Z2R9 100 aa12.09□□□□□ -0.47
SMARCB1-202ENST00000344921 IGLV5-48A0A075B6I7 105 aa12.08□□□□□ -0.47
SMARCB1-202ENST00000344921 Q6ZQY7 126 aa12.08□□□□□ -0.47
SMARCB1-202ENST00000344921 SPAG11AQ6PDA7 123 aa12.08□□□□□ -0.48
SMARCB1-202ENST00000344921 ANKRD29Q8N6D5 301 aa12.08□□□□□ -0.48
SMARCB1-202ENST00000344921 LINC01547P58512 204 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-202ENST00000344921 TRIAP1O43715 76 aa12.06□□□□□ -0.48
SMARCB1-202ENST00000344921 Q8N377 158 aa12.05□□□□□ -0.48
SMARCB1-202ENST00000344921 C9JAW5 83 aa12.04□□□□□ -0.48
SMARCB1-202ENST00000344921 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.04□□□□□ -0.48
SMARCB1-202ENST00000344921 COX6CP09669 75 aa12.03□□□□□ -0.48
SMARCB1-202ENST00000344921 FAM218AQ96MZ4 157 aa12.03□□□□□ -0.48
SMARCB1-202ENST00000344921 SMIM29Q86T20 159 aa12.02□□□□□ -0.49
SMARCB1-202ENST00000344921 H3BT86 120 aa12.01□□□□□ -0.49
SMARCB1-202ENST00000344921 MT-ATP8P03928 68 aa12.01□□□□□ -0.49
SMARCB1-202ENST00000344921 HMCN2Q8NDA2 5059 aa12.01□□□□□ -0.49
SMARCB1-202ENST00000344921 SPINK1P00995 79 aa12□□□□□ -0.49
SMARCB1-202ENST00000344921 PRR4Q16378 134 aa12□□□□□ -0.49
SMARCB1-202ENST00000344921 F8WEM9 126 aa11.98□□□□□ -0.49
SMARCB1-202ENST00000344921 CLEC2BQ92478 149 aa11.98□□□□□ -0.49
SMARCB1-202ENST00000344921 Q6Q795 121 aa11.97□□□□□ -0.49
SMARCB1-202ENST00000344921 A0A1B0GX51 115 aa11.97□□□□□ -0.49
SMARCB1-202ENST00000344921 RETNLBQ9BQ08 111 aa11.96□□□□□ -0.49
SMARCB1-202ENST00000344921 FAM240AA0A1B0GVK7 77 aa11.94□□□□□ -0.5
SMARCB1-202ENST00000344921 HRCT1Q6UXD1 115 aa11.94□□□□□ -0.5
SMARCB1-202ENST00000344921 LST1O00453 97 aa11.93□□□□□ -0.5
SMARCB1-202ENST00000344921 DNAL4O96015 105 aa11.93□□□□□ -0.5
SMARCB1-202ENST00000344921 GHRHP01286 108 aa11.91□□□□□ -0.5
SMARCB1-202ENST00000344921 RPS29P62273 56 aaKnown RBP11.89□□□□□ -0.51
SMARCB1-202ENST00000344921 ANAPC13Q9BS18 74 aa11.89□□□□□ -0.51
SMARCB1-202ENST00000344921 A0A0G2JQZ4 141 aa11.88□□□□□ -0.51
SMARCB1-202ENST00000344921 ORMDL1Q9P0S3 153 aa11.86□□□□□ -0.51
SMARCB1-202ENST00000344921 ACYP1P07311 99 aa11.85□□□□□ -0.51
SMARCB1-202ENST00000344921 CD164Q04900 197 aa11.85□□□□□ -0.51
SMARCB1-202ENST00000344921 Q6JHZ5 121 aa11.84□□□□□ -0.51
SMARCB1-202ENST00000344921 LIMD2Q9BT23 127 aa11.84□□□□□ -0.51
SMARCB1-202ENST00000344921 NDUFV3P56181 108 aaKnown RBP11.83□□□□□ -0.52
SMARCB1-202ENST00000344921 IGLV8-61A0A075B6I0 122 aa11.82□□□□□ -0.52
SMARCB1-202ENST00000344921 TRACP01848 142 aa11.81□□□□□ -0.52
SMARCB1-202ENST00000344921 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
SMARCB1-202ENST00000344921 IGFL1Q6UW32 110 aa11.8□□□□□ -0.52
SMARCB1-202ENST00000344921 H3BQ85 93 aa11.8□□□□□ -0.52
SMARCB1-202ENST00000344921 IMUPQ9GZP8 106 aa11.79□□□□□ -0.52
SMARCB1-202ENST00000344921 LRP2P98164 4655 aa11.79□□□□□ -0.52
SMARCB1-202ENST00000344921 LPAP08519 4548 aa11.79□□□□□ -0.52
SMARCB1-202ENST00000344921 TMEM256-PLSCR3K7ERE1 68 aa11.78□□□□□ -0.52
SMARCB1-202ENST00000344921 FP248Q71RG6 208 aaPredicted RBP11.78□□□□□ -0.52
SMARCB1-202ENST00000344921 TRBV7-7A0A0K0K1E9 115 aa11.77□□□□□ -0.52
SMARCB1-202ENST00000344921 BAALC-AS2P0C853 105 aa11.69□□□□□ -0.54
SMARCB1-202ENST00000344921 TPRXLQ17RH7 258 aa11.69□□□□□ -0.54
SMARCB1-202ENST00000344921 Q5XG85 94 aa11.69□□□□□ -0.54
SMARCB1-202ENST00000344921 LINC00643Q86TS7 51 aa11.69□□□□□ -0.54
SMARCB1-202ENST00000344921 SVIPQ8NHG7 77 aa11.66□□□□□ -0.54
SMARCB1-202ENST00000344921 UBR4Q5T4S7 5183 aa11.65□□□□□ -0.54
SMARCB1-202ENST00000344921 C1orf195Q5TG92 126 aa11.63□□□□□ -0.55
SMARCB1-202ENST00000344921 RBM3P98179 157 aaKnown RBP11.6□□□□□ -0.55
SMARCB1-202ENST00000344921 KRTAP13-3Q3SY46 172 aa11.6□□□□□ -0.55
SMARCB1-202ENST00000344921 CCDC179H3BU77 68 aa11.59□□□□□ -0.55
SMARCB1-202ENST00000344921 SS18L2Q9UHA2 77 aa11.58□□□□□ -0.56
SMARCB1-202ENST00000344921 A0A087WSZ3 146 aa11.57□□□□□ -0.56
SMARCB1-202ENST00000344921 A0A1W2PNM2 257 aa11.57□□□□□ -0.56
SMARCB1-202ENST00000344921 DSCR8Q96T75 97 aa11.57□□□□□ -0.56
SMARCB1-202ENST00000344921 ASB16-AS1Q495Z4 193 aa11.57□□□□□ -0.56
SMARCB1-202ENST00000344921 CCKP06307 115 aa11.56□□□□□ -0.56
SMARCB1-202ENST00000344921 OBSCN-AS1Q96MR7 158 aa11.55□□□□□ -0.56
SMARCB1-202ENST00000344921 TRBV7-4A0A0J9YYF1 115 aa11.53□□□□□ -0.56
SMARCB1-202ENST00000344921 FAM236AA0A1B0GUQ0 79 aa11.52□□□□□ -0.56
SMARCB1-202ENST00000344921 FAM236BA0A1B0GV22 79 aa11.52□□□□□ -0.56
SMARCB1-202ENST00000344921 JMJD7-PLA2G4BH0Y9G9 81 aa11.52□□□□□ -0.56
SMARCB1-202ENST00000344921 C9orf92A6NGG3 77 aa11.51□□□□□ -0.57
SMARCB1-202ENST00000344921 UQCRQO14949 82 aa11.49□□□□□ -0.57
SMARCB1-202ENST00000344921 HIST1H4AP62805 103 aaKnown RBP11.46□□□□□ -0.57
SMARCB1-202ENST00000344921 ATOX1O00244 68 aa11.45□□□□□ -0.58
SMARCB1-202ENST00000344921 C14orf132Q9NPU4 83 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms