RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 TRIOO75962 3097 aa8.79□□□□□ -1
TRIO-202ENST00000344204 Q96NJ1 140 aa8.79□□□□□ -1
TRIO-202ENST00000344204 C9orf163Q8N9P6 203 aa8.78□□□□□ -1
TRIO-202ENST00000344204 TLX1NBP0CAT3 122 aa8.77□□□□□ -1
TRIO-202ENST00000344204 ASH1LQ9NR48 2969 aaKnown RBP8.76□□□□□ -1.01
TRIO-202ENST00000344204 A6NN06 94 aa8.75□□□□□ -1.01
TRIO-202ENST00000344204 HRES1P13985 223 aa8.74□□□□□ -1.01
TRIO-202ENST00000344204 UTRNP46939 3433 aa8.74□□□□□ -1.01
TRIO-202ENST00000344204 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
TRIO-202ENST00000344204 GIG44P09565 113 aaPredicted RBP8.72□□□□□ -1.01
TRIO-202ENST00000344204 LINC00612Q8N6U2 182 aa8.72□□□□□ -1.01
TRIO-202ENST00000344204 A0A1B0GU33 70 aa8.7□□□□□ -1.02
TRIO-202ENST00000344204 HIVEP1P15822 2718 aa8.7□□□□□ -1.02
TRIO-202ENST00000344204 A0A0D9SG42 100 aa8.7□□□□□ -1.02
TRIO-202ENST00000344204 LY6G6CO95867 125 aa8.69□□□□□ -1.02
TRIO-202ENST00000344204 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
TRIO-202ENST00000344204 A0A0A0MQY5 61 aa8.67□□□□□ -1.02
TRIO-202ENST00000344204 Q8N1X5 172 aa8.66□□□□□ -1.02
TRIO-202ENST00000344204 KRTAP10-9P60411 292 aa8.64□□□□□ -1.03
TRIO-202ENST00000344204 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
TRIO-202ENST00000344204 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
TRIO-202ENST00000344204 RTL8CO15255 209 aa8.61□□□□□ -1.03
TRIO-202ENST00000344204 PRUNE2Q8WUY3 3088 aa8.61□□□□□ -1.03
TRIO-202ENST00000344204 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
TRIO-202ENST00000344204 CELSR2Q9HCU4 2923 aa8.6□□□□□ -1.03
TRIO-202ENST00000344204 KRTAP16-1A8MUX0 517 aa8.59□□□□□ -1.03
TRIO-202ENST00000344204 NF1P21359 2839 aa8.59□□□□□ -1.03
TRIO-202ENST00000344204 SMR3AQ99954 134 aa8.58□□□□□ -1.04
TRIO-202ENST00000344204 PDZD2O15018 2839 aa8.58□□□□□ -1.04
TRIO-202ENST00000344204 ZNF861PO60384 105 aa8.57□□□□□ -1.04
TRIO-202ENST00000344204 Q8NDZ9 215 aa8.57□□□□□ -1.04
TRIO-202ENST00000344204 FREM2Q5SZK8 3169 aa8.56□□□□□ -1.04
TRIO-202ENST00000344204 ZANQ9Y493 2812 aa8.56□□□□□ -1.04
TRIO-202ENST00000344204 NBDYA0A0U1RRE5 68 aa8.54□□□□□ -1.04
TRIO-202ENST00000344204 CRYBG3Q68DQ2 2970 aa8.52□□□□□ -1.05
TRIO-202ENST00000344204 C19orf73Q9NVV2 129 aa8.52□□□□□ -1.05
TRIO-202ENST00000344204 NIPBLQ6KC79 2804 aaeCLIP8.52□□□□□ -1.05
TRIO-202ENST00000344204 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
TRIO-202ENST00000344204 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
TRIO-202ENST00000344204 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
TRIO-202ENST00000344204 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
TRIO-202ENST00000344204 COL12A1Q99715 3063 aa8.47□□□□□ -1.05
TRIO-202ENST00000344204 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.05
TRIO-202ENST00000344204 ROMO1P60602 79 aa8.46□□□□□ -1.06
TRIO-202ENST00000344204 RANBP2P49792 3224 aaKnown RBP8.45□□□□□ -1.06
TRIO-202ENST00000344204 Q5W150 140 aa8.45□□□□□ -1.06
TRIO-202ENST00000344204 LCE6AA0A183 80 aa8.45□□□□□ -1.06
TRIO-202ENST00000344204 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
TRIO-202ENST00000344204 Q6ZR54 194 aa8.45□□□□□ -1.06
TRIO-202ENST00000344204 A8MU10 97 aa8.44□□□□□ -1.06
TRIO-202ENST00000344204 SPRR1AP35321 89 aa8.42□□□□□ -1.06
TRIO-202ENST00000344204 ZZEF1O43149 2961 aa8.41□□□□□ -1.06
TRIO-202ENST00000344204 CASC10Q5T4H9 136 aa8.41□□□□□ -1.06
TRIO-202ENST00000344204 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
TRIO-202ENST00000344204 PSORS1C2Q9UIG4 136 aa8.4□□□□□ -1.06
TRIO-202ENST00000344204 TGP01266 2768 aa8.39□□□□□ -1.07
TRIO-202ENST00000344204 KRTAP25-1Q3LHN0 102 aa8.39□□□□□ -1.07
TRIO-202ENST00000344204 LAMA1P25391 3075 aa8.39□□□□□ -1.07
TRIO-202ENST00000344204 FBN2P35556 2912 aa8.39□□□□□ -1.07
TRIO-202ENST00000344204 ADM2Q7Z4H4 148 aa8.38□□□□□ -1.07
TRIO-202ENST00000344204 DMXL2Q8TDJ6 3036 aa8.38□□□□□ -1.07
TRIO-202ENST00000344204 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
TRIO-202ENST00000344204 A0A087X002 238 aa8.36□□□□□ -1.07
TRIO-202ENST00000344204 TENM3Q9P273 2699 aa8.36□□□□□ -1.07
TRIO-202ENST00000344204 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
TRIO-202ENST00000344204 DMXL1Q9Y485 3027 aa8.35□□□□□ -1.07
TRIO-202ENST00000344204 TNP2Q05952 138 aa8.34□□□□□ -1.08
TRIO-202ENST00000344204 WDFY4Q6ZS81 3184 aa8.32□□□□□ -1.08
TRIO-202ENST00000344204 TENM1Q9UKZ4 2725 aa8.32□□□□□ -1.08
TRIO-202ENST00000344204 H1FX-AS1Q4G0G2 97 aa8.32□□□□□ -1.08
TRIO-202ENST00000344204 NDUFAF8A1L188 74 aa8.29□□□□□ -1.08
TRIO-202ENST00000344204 HRNRQ86YZ3 2850 aaPredicted RBP8.29□□□□□ -1.08
TRIO-202ENST00000344204 SPRR1BP22528 89 aa8.28□□□□□ -1.08
TRIO-202ENST00000344204 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
TRIO-202ENST00000344204 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
TRIO-202ENST00000344204 KRTAP10-11P60412 298 aa8.25□□□□□ -1.09
TRIO-202ENST00000344204 DCHS2Q6V1P9 2916 aa8.24□□□□□ -1.09
TRIO-202ENST00000344204 A0A087WTM6 91 aa8.24□□□□□ -1.09
TRIO-202ENST00000344204 TNRC18O15417 2968 aaPredicted RBP8.23□□□□□ -1.09
TRIO-202ENST00000344204 HTTP42858 3142 aa8.2□□□□□ -1.1
TRIO-202ENST00000344204 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
TRIO-202ENST00000344204 K7EIL1 84 aa8.2□□□□□ -1.1
TRIO-202ENST00000344204 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
TRIO-202ENST00000344204 ADGRG4Q8IZF6 3080 aa8.18□□□□□ -1.1
TRIO-202ENST00000344204 S4R3F8 94 aa8.16□□□□□ -1.1
TRIO-202ENST00000344204 MKI67P46013 3256 aaKnown RBP8.15□□□□□ -1.1
TRIO-202ENST00000344204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.12□□□□□ -1.11
TRIO-202ENST00000344204 ZFHX3Q15911 3703 aa8.12□□□□□ -1.11
TRIO-202ENST00000344204 XIRP2A4UGR9 3374 aa8.12□□□□□ -1.11
TRIO-202ENST00000344204 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
TRIO-202ENST00000344204 KRTAP10-3P60369 221 aa8.1□□□□□ -1.11
TRIO-202ENST00000344204 CAMK2N1Q7Z7J9 78 aa8.1□□□□□ -1.11
TRIO-202ENST00000344204 ATMQ13315 3056 aa8.09□□□□□ -1.11
TRIO-202ENST00000344204 PANO1I0J062 215 aa8.09□□□□□ -1.11
TRIO-202ENST00000344204 A8MUU9 505 aa8.08□□□□□ -1.12
TRIO-202ENST00000344204 CELSR3Q9NYQ7 3312 aa8.05□□□□□ -1.12
TRIO-202ENST00000344204 BOD1L1Q8NFC6 3051 aa8.04□□□□□ -1.12
TRIO-202ENST00000344204 COL6A3P12111 3177 aa8.04□□□□□ -1.12
TRIO-202ENST00000344204 WWC2-AS2Q96NR7 200 aa8.03□□□□□ -1.12
TRIO-202ENST00000344204 REV3LO60673 3130 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms