RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
RTN1-202ENST00000342503 PKD1P98161 4303 aa12.29□□□□□ -0.44
RTN1-202ENST00000342503 FAT2Q9NYQ8 4349 aa12.28□□□□□ -0.44
RTN1-202ENST00000342503 F8WEM9 126 aa12.28□□□□□ -0.44
RTN1-202ENST00000342503 SPRR1BP22528 89 aa12.27□□□□□ -0.45
RTN1-202ENST00000342503 ATP5EP2Q5VTU8 51 aa12.27□□□□□ -0.45
RTN1-202ENST00000342503 A0A1W2PNM2 257 aa12.26□□□□□ -0.45
RTN1-202ENST00000342503 FAM30AQ9NZY2 134 aa12.26□□□□□ -0.45
RTN1-202ENST00000342503 SACSQ9NZJ4 4579 aa12.25□□□□□ -0.45
RTN1-202ENST00000342503 Q8NBF4 154 aa12.23□□□□□ -0.45
RTN1-202ENST00000342503 IGLV8-61A0A075B6I0 122 aa12.22□□□□□ -0.45
RTN1-202ENST00000342503 KRTAP10-1P60331 282 aa12.22□□□□□ -0.45
RTN1-202ENST00000342503 HAMPP81172 84 aa12.22□□□□□ -0.45
RTN1-202ENST00000342503 FAM236AA0A1B0GUQ0 79 aa12.21□□□□□ -0.45
RTN1-202ENST00000342503 FAM236BA0A1B0GV22 79 aa12.21□□□□□ -0.45
RTN1-202ENST00000342503 CIRBP-AS1Q8TBR5 109 aa12.21□□□□□ -0.45
RTN1-202ENST00000342503 LCE6AA0A183 80 aa12.2□□□□□ -0.46
RTN1-202ENST00000342503 IGFL1Q6UW32 110 aa12.2□□□□□ -0.46
RTN1-202ENST00000342503 A0A0G2JQZ4 141 aa12.2□□□□□ -0.46
RTN1-202ENST00000342503 A0A1B0GW54 56 aa12.19□□□□□ -0.46
RTN1-202ENST00000342503 SPRR4Q96PI1 79 aa12.19□□□□□ -0.46
RTN1-202ENST00000342503 ANAPC13Q9BS18 74 aa12.19□□□□□ -0.46
RTN1-202ENST00000342503 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
RTN1-202ENST00000342503 A0A087WVE0 104 aa12.18□□□□□ -0.46
RTN1-202ENST00000342503 HIST1H4AP62805 103 aaKnown RBP12.18□□□□□ -0.46
RTN1-202ENST00000342503 Q6ZSA8 131 aa12.18□□□□□ -0.46
RTN1-202ENST00000342503 ZNF861PO60384 105 aa12.17□□□□□ -0.46
RTN1-202ENST00000342503 NREPQ16612 68 aa12.17□□□□□ -0.46
RTN1-202ENST00000342503 SCXQ7RTU7 201 aa12.16□□□□□ -0.46
RTN1-202ENST00000342503 CXCL6P80162 114 aa12.15□□□□□ -0.46
RTN1-202ENST00000342503 CRYGAP11844 174 aa12.13□□□□□ -0.47
RTN1-202ENST00000342503 ZNF706Q9Y5V0 76 aaPredicted RBP12.13□□□□□ -0.47
RTN1-202ENST00000342503 IGLV7-43P04211 117 aa12.12□□□□□ -0.47
RTN1-202ENST00000342503 LINC00483Q53H64 154 aa12.12□□□□□ -0.47
RTN1-202ENST00000342503 LINC00336Q6ZUF6 198 aa12.07□□□□□ -0.48
RTN1-202ENST00000342503 IGLV9-49A0A0B4J1Y8 123 aa12.06□□□□□ -0.48
RTN1-202ENST00000342503 BPY2O14599 106 aa12.06□□□□□ -0.48
RTN1-202ENST00000342503 C9orf153Q5TBE3 101 aa12.04□□□□□ -0.48
RTN1-202ENST00000342503 ANAPC11Q9NYG5 84 aa12.03□□□□□ -0.48
RTN1-202ENST00000342503 A0A087WSZ3 146 aa12.03□□□□□ -0.48
RTN1-202ENST00000342503 ATOX1O00244 68 aa12.03□□□□□ -0.48
RTN1-202ENST00000342503 RYR2Q92736 4967 aa12.01□□□□□ -0.49
RTN1-202ENST00000342503 Q8N9L7 120 aa12□□□□□ -0.49
RTN1-202ENST00000342503 IGKV4-1P06312 121 aa11.99□□□□□ -0.49
RTN1-202ENST00000342503 LRP1BQ9NZR2 4599 aa11.98□□□□□ -0.49
RTN1-202ENST00000342503 A0A1B0GVY2 172 aa11.97□□□□□ -0.49
RTN1-202ENST00000342503 CCDC179H3BU77 68 aa11.97□□□□□ -0.49
RTN1-202ENST00000342503 RPL37AP61513 92 aaKnown RBP11.97□□□□□ -0.49
RTN1-202ENST00000342503 MOBPQ13875 183 aa11.96□□□□□ -0.49
RTN1-202ENST00000342503 DSCR10P59022 87 aa11.93□□□□□ -0.5
RTN1-202ENST00000342503 DEFB116Q30KQ4 102 aa11.91□□□□□ -0.5
RTN1-202ENST00000342503 PKHD1P08F94 4074 aa11.91□□□□□ -0.5
RTN1-202ENST00000342503 DYNC1H1Q14204 4646 aaKnown RBP11.91□□□□□ -0.5
RTN1-202ENST00000342503 HRCT1Q6UXD1 115 aa11.9□□□□□ -0.5
RTN1-202ENST00000342503 COX7CP15954 63 aa11.89□□□□□ -0.51
RTN1-202ENST00000342503 SERP2Q8N6R1 65 aa11.88□□□□□ -0.51
RTN1-202ENST00000342503 KMT2CQ8NEZ4 4911 aaKnown RBP11.87□□□□□ -0.51
RTN1-202ENST00000342503 K7EQZ3 153 aa11.86□□□□□ -0.51
RTN1-202ENST00000342503 UQCRQO14949 82 aa11.86□□□□□ -0.51
RTN1-202ENST00000342503 LINC00472Q9H8W2 130 aa11.86□□□□□ -0.51
RTN1-202ENST00000342503 VPS13BQ7Z7G8 4022 aa11.84□□□□□ -0.51
RTN1-202ENST00000342503 SSBP3-AS1Q7Z2R9 100 aa11.79□□□□□ -0.52
RTN1-202ENST00000342503 SMIM20Q8N5G0 67 aa11.79□□□□□ -0.52
RTN1-202ENST00000342503 TRAV7A0A075B6U4 112 aa11.78□□□□□ -0.52
RTN1-202ENST00000342503 A0A087X002 238 aa11.78□□□□□ -0.52
RTN1-202ENST00000342503 SS18L2Q9UHA2 77 aa11.78□□□□□ -0.52
RTN1-202ENST00000342503 FAM229BQ4G0N7 80 aa11.77□□□□□ -0.52
RTN1-202ENST00000342503 Q96NJ1 140 aa11.77□□□□□ -0.52
RTN1-202ENST00000342503 J3QL48 77 aa11.77□□□□□ -0.53
RTN1-202ENST00000342503 KRTAP13-2Q52LG2 175 aa11.77□□□□□ -0.53
RTN1-202ENST00000342503 SMR3BP02814 79 aaPredicted RBP11.76□□□□□ -0.53
RTN1-202ENST00000342503 KRTAP1-4P0C5Y4 121 aa11.76□□□□□ -0.53
RTN1-202ENST00000342503 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
RTN1-202ENST00000342503 A8MWP4 228 aa11.74□□□□□ -0.53
RTN1-202ENST00000342503 J3KT08 172 aa11.74□□□□□ -0.53
RTN1-202ENST00000342503 HCG22E2RYF7 251 aa11.73□□□□□ -0.53
RTN1-202ENST00000342503 CD164Q04900 197 aa11.72□□□□□ -0.53
RTN1-202ENST00000342503 PRR15Q8IV56 129 aa11.72□□□□□ -0.53
RTN1-202ENST00000342503 SPINK6Q6UWN8 80 aa11.7□□□□□ -0.54
RTN1-202ENST00000342503 OCR1Q9BZK8 76 aa11.69□□□□□ -0.54
RTN1-202ENST00000342503 WFDC13Q8IUB5 93 aa11.67□□□□□ -0.54
RTN1-202ENST00000342503 PLA2G1BP04054 148 aaKnown RBP11.66□□□□□ -0.54
RTN1-202ENST00000342503 NDUFB1O75438 58 aa11.65□□□□□ -0.54
RTN1-202ENST00000342503 LCE2AQ5TA79 106 aaPredicted RBP11.65□□□□□ -0.54
RTN1-202ENST00000342503 CYSTM1Q9H1C7 97 aa11.65□□□□□ -0.54
RTN1-202ENST00000342503 C20orf197Q8N268 126 aa11.64□□□□□ -0.55
RTN1-202ENST00000342503 RYR3Q15413 4870 aa11.63□□□□□ -0.55
RTN1-202ENST00000342503 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
RTN1-202ENST00000342503 KRTAP10-4P60372 401 aaPredicted RBP11.63□□□□□ -0.55
RTN1-202ENST00000342503 CASC2Q6XLA1 102 aa11.61□□□□□ -0.55
RTN1-202ENST00000342503 MMP24-AS1A0A0U1RRL7 71 aa11.6□□□□□ -0.55
RTN1-202ENST00000342503 CDK2AP2O75956 126 aa11.59□□□□□ -0.55
RTN1-202ENST00000342503 ASB16-AS1Q495Z4 193 aa11.58□□□□□ -0.56
RTN1-202ENST00000342503 TYMSOSQ8TAI1 123 aa11.58□□□□□ -0.56
RTN1-202ENST00000342503 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
RTN1-202ENST00000342503 FAT1Q14517 4588 aa11.56□□□□□ -0.56
RTN1-202ENST00000342503 IGHV6-1A0A0B4J1U7 121 aa11.55□□□□□ -0.56
RTN1-202ENST00000342503 SNURFQ9Y675 71 aa11.55□□□□□ -0.56
RTN1-202ENST00000342503 C4orf48Q5BLP8 95 aa11.55□□□□□ -0.56
RTN1-202ENST00000342503 C8orf17Q9NRJ1 99 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms