RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 KTN1-AS1Q86SY8 53 aa9.39□□□□□ -0.91
RRP1B-201ENST00000340648 CFAP47Q6ZTR5 3102 aa9.39□□□□□ -0.91
RRP1B-201ENST00000340648 UNC79Q9P2D8 2635 aa9.39□□□□□ -0.91
RRP1B-201ENST00000340648 CNBPP62633 177 aaKnown RBP9.37□□□□□ -0.91
RRP1B-201ENST00000340648 MAST4O15021 2626 aa9.36□□□□□ -0.91
RRP1B-201ENST00000340648 TEX15Q9BXT5 2789 aa9.35□□□□□ -0.91
RRP1B-201ENST00000340648 ZNF861PO60384 105 aa9.34□□□□□ -0.91
RRP1B-201ENST00000340648 DMXL2Q8TDJ6 3036 aa9.34□□□□□ -0.91
RRP1B-201ENST00000340648 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
RRP1B-201ENST00000340648 Q96NJ1 140 aa9.33□□□□□ -0.92
RRP1B-201ENST00000340648 UQCR11O14957 56 aa9.32□□□□□ -0.92
RRP1B-201ENST00000340648 LOC400499M0QZD8 3231 aa9.32□□□□□ -0.92
RRP1B-201ENST00000340648 SPRR1AP35321 89 aa9.32□□□□□ -0.92
RRP1B-201ENST00000340648 CDC42SE1Q9NRR8 79 aa9.31□□□□□ -0.92
RRP1B-201ENST00000340648 HELZ2Q9BYK8 2649 aaKnown RBP9.31□□□□□ -0.92
RRP1B-201ENST00000340648 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
RRP1B-201ENST00000340648 COL12A1Q99715 3063 aa9.29□□□□□ -0.92
RRP1B-201ENST00000340648 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
RRP1B-201ENST00000340648 PRR26Q8N8Z3 221 aa9.29□□□□□ -0.92
RRP1B-201ENST00000340648 MIR22HGQ0VDD5 57 aa9.29□□□□□ -0.92
RRP1B-201ENST00000340648 A0A087WTM6 91 aa9.28□□□□□ -0.92
RRP1B-201ENST00000340648 KRTAP26-1Q6PEX3 210 aa9.27□□□□□ -0.93
RRP1B-201ENST00000340648 Q8N9P0 234 aaPredicted RBP9.27□□□□□ -0.93
RRP1B-201ENST00000340648 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
RRP1B-201ENST00000340648 IGSF10Q6WRI0 2623 aa9.26□□□□□ -0.93
RRP1B-201ENST00000340648 ITPR1Q14643 2758 aa9.26□□□□□ -0.93
RRP1B-201ENST00000340648 APLNQ9ULZ1 77 aa9.24□□□□□ -0.93
RRP1B-201ENST00000340648 SSBP3-AS1Q7Z2R9 100 aa9.24□□□□□ -0.93
RRP1B-201ENST00000340648 SETXQ7Z333 2677 aaKnown RBP9.24□□□□□ -0.93
RRP1B-201ENST00000340648 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
RRP1B-201ENST00000340648 FLNCQ14315 2725 aa9.23□□□□□ -0.93
RRP1B-201ENST00000340648 LCA10Q71F78 164 aa9.22□□□□□ -0.93
RRP1B-201ENST00000340648 Q75L30 129 aa9.21□□□□□ -0.93
RRP1B-201ENST00000340648 Q5VV11 94 aa9.21□□□□□ -0.94
RRP1B-201ENST00000340648 PLA2G1BP04054 148 aaKnown RBP9.21□□□□□ -0.94
RRP1B-201ENST00000340648 WDFY3Q8IZQ1 3526 aa9.2□□□□□ -0.94
RRP1B-201ENST00000340648 ASH1LQ9NR48 2969 aaKnown RBP9.2□□□□□ -0.94
RRP1B-201ENST00000340648 IGLV7-43P04211 117 aa9.2□□□□□ -0.94
RRP1B-201ENST00000340648 TNP2Q05952 138 aa9.19□□□□□ -0.94
RRP1B-201ENST00000340648 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
RRP1B-201ENST00000340648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.17□□□□□ -0.94
RRP1B-201ENST00000340648 UBR5O95071 2799 aaPredicted RBP9.16□□□□□ -0.94
RRP1B-201ENST00000340648 DMXL1Q9Y485 3027 aa9.14□□□□□ -0.95
RRP1B-201ENST00000340648 RBM12B-AS1Q9P1G2 102 aa9.14□□□□□ -0.95
RRP1B-201ENST00000340648 NOTCH1P46531 2555 aa9.14□□□□□ -0.95
RRP1B-201ENST00000340648 LINC01558Q9Y6Z2 57 aa9.13□□□□□ -0.95
RRP1B-201ENST00000340648 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
RRP1B-201ENST00000340648 TNRC18O15417 2968 aaPredicted RBP9.11□□□□□ -0.95
RRP1B-201ENST00000340648 HRES1P13985 223 aa9.1□□□□□ -0.95
RRP1B-201ENST00000340648 Q8N1X5 172 aa9.1□□□□□ -0.95
RRP1B-201ENST00000340648 SPRR1BP22528 89 aa9.1□□□□□ -0.95
RRP1B-201ENST00000340648 HRNRQ86YZ3 2850 aaPredicted RBP9.08□□□□□ -0.96
RRP1B-201ENST00000340648 KRTAP1-5Q9BYS1 174 aa9.08□□□□□ -0.96
RRP1B-201ENST00000340648 TEP1Q99973 2627 aaKnown RBP9.08□□□□□ -0.96
RRP1B-201ENST00000340648 C9orf92A6NGG3 77 aa9.07□□□□□ -0.96
RRP1B-201ENST00000340648 SPINK7P58062 85 aa9.06□□□□□ -0.96
RRP1B-201ENST00000340648 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
RRP1B-201ENST00000340648 ZANQ9Y493 2812 aa9.05□□□□□ -0.96
RRP1B-201ENST00000340648 LINC00304Q8N9R0 145 aa9.05□□□□□ -0.96
RRP1B-201ENST00000340648 NBEAL1Q6ZS30 2694 aa9.04□□□□□ -0.96
RRP1B-201ENST00000340648 DCHS1Q96JQ0 3298 aa9.04□□□□□ -0.96
RRP1B-201ENST00000340648 UTP20O75691 2785 aaKnown RBP9.03□□□□□ -0.96
RRP1B-201ENST00000340648 BAHCC1Q9P281 2608 aa9.02□□□□□ -0.97
RRP1B-201ENST00000340648 PRAC1Q96KF2 57 aa9.02□□□□□ -0.97
RRP1B-201ENST00000340648 SPINT4Q6UDR6 99 aa9.02□□□□□ -0.97
RRP1B-201ENST00000340648 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
RRP1B-201ENST00000340648 COL6A5A8TX70 2615 aa9.01□□□□□ -0.97
RRP1B-201ENST00000340648 ZFHX4Q86UP3 3567 aa9.01□□□□□ -0.97
RRP1B-201ENST00000340648 WWC2-AS2Q96NR7 200 aa8.95□□□□□ -0.98
RRP1B-201ENST00000340648 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
RRP1B-201ENST00000340648 ASPMQ8IZT6 3477 aa8.95□□□□□ -0.98
RRP1B-201ENST00000340648 STAB1Q9NY15 2570 aa8.94□□□□□ -0.98
RRP1B-201ENST00000340648 Q5W150 140 aa8.94□□□□□ -0.98
RRP1B-201ENST00000340648 PLAC8Q9NZF1 115 aa8.92□□□□□ -0.98
RRP1B-201ENST00000340648 LCE6AA0A183 80 aa8.92□□□□□ -0.98
RRP1B-201ENST00000340648 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
RRP1B-201ENST00000340648 PANO1I0J062 215 aa8.9□□□□□ -0.98
RRP1B-201ENST00000340648 APCP25054 2843 aa8.88□□□□□ -0.99
RRP1B-201ENST00000340648 CELSR2Q9HCU4 2923 aa8.88□□□□□ -0.99
RRP1B-201ENST00000340648 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
RRP1B-201ENST00000340648 Q6ZR54 194 aa8.88□□□□□ -0.99
RRP1B-201ENST00000340648 RELNP78509 3460 aa8.87□□□□□ -0.99
RRP1B-201ENST00000340648 FBN2P35556 2912 aa8.87□□□□□ -0.99
RRP1B-201ENST00000340648 KRTAP11-1Q8IUC1 163 aa8.86□□□□□ -0.99
RRP1B-201ENST00000340648 A0A0D9SG42 100 aa8.86□□□□□ -0.99
RRP1B-201ENST00000340648 HIVEP1P15822 2718 aa8.86□□□□□ -0.99
RRP1B-201ENST00000340648 NSD1Q96L73 2696 aaPredicted RBP8.83□□□□□ -1
RRP1B-201ENST00000340648 A0A1B0GU33 70 aa8.83□□□□□ -1
RRP1B-201ENST00000340648 A8MU10 97 aa8.83□□□□□ -1
RRP1B-201ENST00000340648 LINC00483Q53H64 154 aa8.82□□□□□ -1
RRP1B-201ENST00000340648 CRIPTQ9P021 101 aa8.82□□□□□ -1
RRP1B-201ENST00000340648 A0A087X002 238 aa8.82□□□□□ -1
RRP1B-201ENST00000340648 NOTCH2NLQ7Z3S9 236 aa8.82□□□□□ -1
RRP1B-201ENST00000340648 DMDP11532 3685 aa8.81□□□□□ -1
RRP1B-201ENST00000340648 LAMA5O15230 3695 aa8.81□□□□□ -1
RRP1B-201ENST00000340648 NF1P21359 2839 aa8.81□□□□□ -1
RRP1B-201ENST00000340648 ITPR2Q14571 2701 aa8.81□□□□□ -1
RRP1B-201ENST00000340648 CSAG1Q6PB30 78 aa8.8□□□□□ -1
RRP1B-201ENST00000340648 DMAC1Q96GE9 116 aa8.79□□□□□ -1
RRP1B-201ENST00000340648 CSMD1Q96PZ7 3565 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms