RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
TRIM2-201ENST00000338700 DNAH14Q0VDD8 3507 aa4.81□□□□□ -1.64
TRIM2-201ENST00000338700 CDH23Q9H251 3354 aa4.79□□□□□ -1.64
TRIM2-201ENST00000338700 Q5VSD8 79 aa4.79□□□□□ -1.64
TRIM2-201ENST00000338700 TNRC18O15417 2968 aaPredicted RBP4.79□□□□□ -1.64
TRIM2-201ENST00000338700 SZT2Q5T011 3432 aa4.78□□□□□ -1.64
TRIM2-201ENST00000338700 A0A0D9SG42 100 aa4.78□□□□□ -1.64
TRIM2-201ENST00000338700 MAST4O15021 2626 aa4.77□□□□□ -1.65
TRIM2-201ENST00000338700 OCR1Q9BZK8 76 aa4.77□□□□□ -1.65
TRIM2-201ENST00000338700 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
TRIM2-201ENST00000338700 DMAC1Q96GE9 116 aa4.76□□□□□ -1.65
TRIM2-201ENST00000338700 M0R2T5 61 aa4.76□□□□□ -1.65
TRIM2-201ENST00000338700 IGSF10Q6WRI0 2623 aa4.76□□□□□ -1.65
TRIM2-201ENST00000338700 UNC80Q8N2C7 3258 aa4.75□□□□□ -1.65
TRIM2-201ENST00000338700 AKAP13Q12802 2813 aa4.75□□□□□ -1.65
TRIM2-201ENST00000338700 BPTFQ12830 3046 aa4.75□□□□□ -1.65
TRIM2-201ENST00000338700 SPRR1AP35321 89 aa4.75□□□□□ -1.65
TRIM2-201ENST00000338700 PRRC2CQ9Y520 2896 aaKnown RBP4.74□□□□□ -1.65
TRIM2-201ENST00000338700 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
TRIM2-201ENST00000338700 ATRQ13535 2644 aa4.74□□□□□ -1.65
TRIM2-201ENST00000338700 ZCCHC13Q8WW36 166 aaKnown RBP4.74□□□□□ -1.65
TRIM2-201ENST00000338700 LAMA2P24043 3122 aaKnown RBP4.74□□□□□ -1.65
TRIM2-201ENST00000338700 PRUNE2Q8WUY3 3088 aa4.73□□□□□ -1.65
TRIM2-201ENST00000338700 SPINK7P58062 85 aa4.72□□□□□ -1.65
TRIM2-201ENST00000338700 HRES1P13985 223 aa4.72□□□□□ -1.65
TRIM2-201ENST00000338700 SPRR1BP22528 89 aa4.71□□□□□ -1.65
TRIM2-201ENST00000338700 TEP1Q99973 2627 aaKnown RBP4.71□□□□□ -1.66
TRIM2-201ENST00000338700 MMP24-AS1A0A0U1RRL7 71 aa4.71□□□□□ -1.66
TRIM2-201ENST00000338700 MGAQ8IWI9 3026 aa4.71□□□□□ -1.66
TRIM2-201ENST00000338700 S4R3F8 94 aa4.7□□□□□ -1.66
TRIM2-201ENST00000338700 KRTAP1-5Q9BYS1 174 aa4.7□□□□□ -1.66
TRIM2-201ENST00000338700 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
TRIM2-201ENST00000338700 Q8NDZ9 215 aa4.69□□□□□ -1.66
TRIM2-201ENST00000338700 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
TRIM2-201ENST00000338700 A0A1B0GU33 70 aa4.68□□□□□ -1.66
TRIM2-201ENST00000338700 CELSR3Q9NYQ7 3312 aa4.68□□□□□ -1.66
TRIM2-201ENST00000338700 KRTAP10-1P60331 282 aa4.68□□□□□ -1.66
TRIM2-201ENST00000338700 UNC79Q9P2D8 2635 aa4.68□□□□□ -1.66
TRIM2-201ENST00000338700 SETXQ7Z333 2677 aaKnown RBP4.68□□□□□ -1.66
TRIM2-201ENST00000338700 KRTAP26-1Q6PEX3 210 aa4.67□□□□□ -1.66
TRIM2-201ENST00000338700 KRTAP10-2P60368 255 aa4.66□□□□□ -1.66
TRIM2-201ENST00000338700 GCN1Q92616 2671 aaKnown RBP4.66□□□□□ -1.66
TRIM2-201ENST00000338700 LINC00472Q9H8W2 130 aa4.65□□□□□ -1.66
TRIM2-201ENST00000338700 ASB16-AS1Q495Z4 193 aa4.65□□□□□ -1.66
TRIM2-201ENST00000338700 A0A0C4DFX4 3053 aa4.65□□□□□ -1.66
TRIM2-201ENST00000338700 A6NN06 94 aa4.65□□□□□ -1.66
TRIM2-201ENST00000338700 DSPP15924 2871 aaKnown RBP4.65□□□□□ -1.67
TRIM2-201ENST00000338700 Q5W150 140 aa4.65□□□□□ -1.67
TRIM2-201ENST00000338700 Q6ZR54 194 aa4.64□□□□□ -1.67
TRIM2-201ENST00000338700 CENPEQ02224 2701 aa4.63□□□□□ -1.67
TRIM2-201ENST00000338700 LINC00483Q53H64 154 aa4.63□□□□□ -1.67
TRIM2-201ENST00000338700 TEX15Q9BXT5 2789 aa4.63□□□□□ -1.67
TRIM2-201ENST00000338700 CHD6Q8TD26 2715 aa4.62□□□□□ -1.67
TRIM2-201ENST00000338700 COL6A5A8TX70 2615 aa4.61□□□□□ -1.67
TRIM2-201ENST00000338700 MYO15AQ9UKN7 3530 aa4.59□□□□□ -1.67
TRIM2-201ENST00000338700 SPEGQ15772 3267 aa4.59□□□□□ -1.67
TRIM2-201ENST00000338700 CFAP54Q96N23 3096 aa4.59□□□□□ -1.67
TRIM2-201ENST00000338700 R4GN34 69 aa4.58□□□□□ -1.68
TRIM2-201ENST00000338700 KMT2BQ9UMN6 2715 aaPredicted RBP4.58□□□□□ -1.68
TRIM2-201ENST00000338700 WDFY4Q6ZS81 3184 aa4.58□□□□□ -1.68
TRIM2-201ENST00000338700 VCANP13611 3396 aa4.57□□□□□ -1.68
TRIM2-201ENST00000338700 COL6A3P12111 3177 aa4.57□□□□□ -1.68
TRIM2-201ENST00000338700 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
TRIM2-201ENST00000338700 ITPR2Q14571 2701 aa4.56□□□□□ -1.68
TRIM2-201ENST00000338700 PANO1I0J062 215 aa4.55□□□□□ -1.68
TRIM2-201ENST00000338700 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
TRIM2-201ENST00000338700 ROMO1P60602 79 aa4.55□□□□□ -1.68
TRIM2-201ENST00000338700 TRIOO75962 3097 aa4.54□□□□□ -1.68
TRIM2-201ENST00000338700 KRTAP4-16G5E9R7 235 aaPredicted RBP4.54□□□□□ -1.68
TRIM2-201ENST00000338700 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
TRIM2-201ENST00000338700 EYSQ5T1H1 3165 aa4.53□□□□□ -1.68
TRIM2-201ENST00000338700 STAB1Q9NY15 2570 aa4.52□□□□□ -1.69
TRIM2-201ENST00000338700 VPS13AQ96RL7 3174 aa4.51□□□□□ -1.69
TRIM2-201ENST00000338700 SPTBN5Q9NRC6 3674 aaKnown RBP4.51□□□□□ -1.69
TRIM2-201ENST00000338700 A0A087X002 238 aa4.5□□□□□ -1.69
TRIM2-201ENST00000338700 A8MU10 97 aa4.5□□□□□ -1.69
TRIM2-201ENST00000338700 FREM2Q5SZK8 3169 aa4.49□□□□□ -1.69
TRIM2-201ENST00000338700 M0QZ58 72 aa4.49□□□□□ -1.69
TRIM2-201ENST00000338700 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
TRIM2-201ENST00000338700 Q6ZRN7 208 aaPredicted RBP4.48□□□□□ -1.69
TRIM2-201ENST00000338700 RPL37P61927 97 aaKnown RBP4.47□□□□□ -1.69
TRIM2-201ENST00000338700 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
TRIM2-201ENST00000338700 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
TRIM2-201ENST00000338700 HIVEP1P15822 2718 aa4.46□□□□□ -1.7
TRIM2-201ENST00000338700 LAMA1P25391 3075 aa4.46□□□□□ -1.7
TRIM2-201ENST00000338700 SPATA8Q6RVD6 105 aa4.45□□□□□ -1.7
TRIM2-201ENST00000338700 KRTAP29-1A8MX34 341 aaPredicted RBP4.45□□□□□ -1.7
TRIM2-201ENST00000338700 WDFY3Q8IZQ1 3526 aa4.42□□□□□ -1.7
TRIM2-201ENST00000338700 KRTAP11-1Q8IUC1 163 aa4.42□□□□□ -1.7
TRIM2-201ENST00000338700 FRYLO94915 3013 aa4.42□□□□□ -1.7
TRIM2-201ENST00000338700 DMXL2Q8TDJ6 3036 aa4.41□□□□□ -1.7
TRIM2-201ENST00000338700 UTP20O75691 2785 aaKnown RBP4.41□□□□□ -1.7
TRIM2-201ENST00000338700 FRYQ5TBA9 3013 aa4.4□□□□□ -1.71
TRIM2-201ENST00000338700 TENM4Q6N022 2769 aa4.39□□□□□ -1.71
TRIM2-201ENST00000338700 NOTCH2NLQ7Z3S9 236 aa4.39□□□□□ -1.71
TRIM2-201ENST00000338700 NOTCH1P46531 2555 aa4.38□□□□□ -1.71
TRIM2-201ENST00000338700 REV3LO60673 3130 aa4.38□□□□□ -1.71
TRIM2-201ENST00000338700 KRTAP7-1Q8IUC3 87 aa4.38□□□□□ -1.71
TRIM2-201ENST00000338700 FLNCQ14315 2725 aa4.37□□□□□ -1.71
TRIM2-201ENST00000338700 APCP25054 2843 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms