RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
PRKN-201ENST00000338468 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
PRKN-201ENST00000338468 TMA7Q9Y2S6 64 aaKnown RBP8.48□□□□□ -1.05
PRKN-201ENST00000338468 A0A0B4J2C4 111 aa8.47□□□□□ -1.05
PRKN-201ENST00000338468 H7C2G1 150 aa8.46□□□□□ -1.06
PRKN-201ENST00000338468 LIMD2Q9BT23 127 aa8.46□□□□□ -1.06
PRKN-201ENST00000338468 BVES-AS1Q5T3Y7 98 aa8.45□□□□□ -1.06
PRKN-201ENST00000338468 CEND1Q8N111 149 aa8.45□□□□□ -1.06
PRKN-201ENST00000338468 RAB37Q96AX2 223 aa8.44□□□□□ -1.06
PRKN-201ENST00000338468 FXYD2P54710 66 aa8.43□□□□□ -1.06
PRKN-201ENST00000338468 Q5XG85 94 aa8.43□□□□□ -1.06
PRKN-201ENST00000338468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.43□□□□□ -1.06
PRKN-201ENST00000338468 IGLV8-61A0A075B6I0 122 aa8.41□□□□□ -1.06
PRKN-201ENST00000338468 FAM218AQ96MZ4 157 aa8.41□□□□□ -1.06
PRKN-201ENST00000338468 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.06
PRKN-201ENST00000338468 F8WEM9 126 aa8.39□□□□□ -1.07
PRKN-201ENST00000338468 XP32Q5T750 250 aa8.39□□□□□ -1.07
PRKN-201ENST00000338468 C1orf195Q5TG92 126 aa8.39□□□□□ -1.07
PRKN-201ENST00000338468 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
PRKN-201ENST00000338468 PPDPFLQ8WWR9 84 aa8.38□□□□□ -1.07
PRKN-201ENST00000338468 TMEM238LA0A1B0GVL6 79 aa8.37□□□□□ -1.07
PRKN-201ENST00000338468 A6NJY4 79 aa8.37□□□□□ -1.07
PRKN-201ENST00000338468 H0YGX0 51 aa8.37□□□□□ -1.07
PRKN-201ENST00000338468 OCIAD2Q56VL3 154 aa8.37□□□□□ -1.07
PRKN-201ENST00000338468 IGFL1Q6UW32 110 aa8.37□□□□□ -1.07
PRKN-201ENST00000338468 HSD52Q0P140 79 aa8.36□□□□□ -1.07
PRKN-201ENST00000338468 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
PRKN-201ENST00000338468 Q6JHZ5 121 aa8.35□□□□□ -1.07
PRKN-201ENST00000338468 TRIAP1O43715 76 aa8.34□□□□□ -1.07
PRKN-201ENST00000338468 CLEC2BQ92478 149 aa8.34□□□□□ -1.07
PRKN-201ENST00000338468 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
PRKN-201ENST00000338468 K7ERJ3 54 aa8.33□□□□□ -1.08
PRKN-201ENST00000338468 SNHG12Q9BXW3 62 aa8.33□□□□□ -1.08
PRKN-201ENST00000338468 UQCR10Q9UDW1 63 aa8.33□□□□□ -1.08
PRKN-201ENST00000338468 H3BUT2 72 aa8.32□□□□□ -1.08
PRKN-201ENST00000338468 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
PRKN-201ENST00000338468 CRCT1Q9UGL9 99 aa8.32□□□□□ -1.08
PRKN-201ENST00000338468 TRBV7-7A0A0K0K1E9 115 aa8.31□□□□□ -1.08
PRKN-201ENST00000338468 A0A1B0GX51 115 aa8.3□□□□□ -1.08
PRKN-201ENST00000338468 TCL1BO95988 128 aa8.3□□□□□ -1.08
PRKN-201ENST00000338468 SNCGO76070 127 aa8.29□□□□□ -1.08
PRKN-201ENST00000338468 NDUFV3P56181 108 aaKnown RBP8.28□□□□□ -1.08
PRKN-201ENST00000338468 FSIP2Q5CZC0 6907 aa8.27□□□□□ -1.09
PRKN-201ENST00000338468 PSMB2P49721 201 aa8.23□□□□□ -1.09
PRKN-201ENST00000338468 Q6Q795 121 aa8.23□□□□□ -1.09
PRKN-201ENST00000338468 FABP2P12104 132 aa8.22□□□□□ -1.09
PRKN-201ENST00000338468 PCOTHQ58A44 107 aa8.22□□□□□ -1.09
PRKN-201ENST00000338468 H3BMG7 143 aa8.21□□□□□ -1.1
PRKN-201ENST00000338468 GHRHP01286 108 aa8.2□□□□□ -1.1
PRKN-201ENST00000338468 TEN1Q86WV5 123 aa8.2□□□□□ -1.1
PRKN-201ENST00000338468 COX6CP09669 75 aa8.18□□□□□ -1.1
PRKN-201ENST00000338468 ORMDL1Q9P0S3 153 aa8.18□□□□□ -1.1
PRKN-201ENST00000338468 A0A1W2PNM2 257 aa8.17□□□□□ -1.1
PRKN-201ENST00000338468 LST1O00453 97 aa8.17□□□□□ -1.1
PRKN-201ENST00000338468 DNAL4O96015 105 aa8.17□□□□□ -1.1
PRKN-201ENST00000338468 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
PRKN-201ENST00000338468 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
PRKN-201ENST00000338468 A0A087WSZ3 146 aa8.15□□□□□ -1.1
PRKN-201ENST00000338468 SS18L2Q9UHA2 77 aa8.15□□□□□ -1.1
PRKN-201ENST00000338468 A0A1B0GV72 72 aa8.14□□□□□ -1.11
PRKN-201ENST00000338468 H3BQ85 93 aa8.14□□□□□ -1.11
PRKN-201ENST00000338468 TRACP01848 142 aa8.14□□□□□ -1.11
PRKN-201ENST00000338468 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
PRKN-201ENST00000338468 Q96NJ1 140 aa8.14□□□□□ -1.11
PRKN-201ENST00000338468 TMEM256-PLSCR3K7ERE1 68 aa8.13□□□□□ -1.11
PRKN-201ENST00000338468 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
PRKN-201ENST00000338468 OBSCN-AS1Q96MR7 158 aa8.12□□□□□ -1.11
PRKN-201ENST00000338468 SCGB1C2P0DMR2 95 aa8.11□□□□□ -1.11
PRKN-201ENST00000338468 UBE2V1Q13404 147 aa8.11□□□□□ -1.11
PRKN-201ENST00000338468 ANKRD29Q8N6D5 301 aa8.11□□□□□ -1.11
PRKN-201ENST00000338468 TRBV7-4A0A0J9YYF1 115 aa8.09□□□□□ -1.11
PRKN-201ENST00000338468 M0R143 59 aa8.09□□□□□ -1.11
PRKN-201ENST00000338468 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
PRKN-201ENST00000338468 NAA38Q9BRA0 125 aaKnown RBP8.08□□□□□ -1.12
PRKN-201ENST00000338468 Q75L30 129 aa8.06□□□□□ -1.12
PRKN-201ENST00000338468 CCKP06307 115 aa8.05□□□□□ -1.12
PRKN-201ENST00000338468 BAALC-AS2P0C853 105 aa8.04□□□□□ -1.12
PRKN-201ENST00000338468 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.13
PRKN-201ENST00000338468 TSTD3H0UI37 97 aa8.01□□□□□ -1.13
PRKN-201ENST00000338468 RBM3P98179 157 aaKnown RBP8.01□□□□□ -1.13
PRKN-201ENST00000338468 C20orf166-AS1Q96NR2 134 aa8.01□□□□□ -1.13
PRKN-201ENST00000338468 DSCR10P59022 87 aa8□□□□□ -1.13
PRKN-201ENST00000338468 ATXN8Q156A1 80 aa8□□□□□ -1.13
PRKN-201ENST00000338468 SIGMAR1Q99720 223 aa8□□□□□ -1.13
PRKN-201ENST00000338468 A8MUU9 505 aa7.99□□□□□ -1.13
PRKN-201ENST00000338468 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
PRKN-201ENST00000338468 MT1HP80294 61 aa7.99□□□□□ -1.13
PRKN-201ENST00000338468 DEFB116Q30KQ4 102 aa7.99□□□□□ -1.13
PRKN-201ENST00000338468 DSCR8Q96T75 97 aa7.98□□□□□ -1.13
PRKN-201ENST00000338468 ATP11AUNQ6ZP68 121 aa7.97□□□□□ -1.13
PRKN-201ENST00000338468 VPS25Q9BRG1 176 aa7.97□□□□□ -1.13
PRKN-201ENST00000338468 BATFQ16520 125 aa7.96□□□□□ -1.14
PRKN-201ENST00000338468 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.14
PRKN-201ENST00000338468 KRTAP16-1A8MUX0 517 aa7.95□□□□□ -1.14
PRKN-201ENST00000338468 C9JAW5 83 aa7.94□□□□□ -1.14
PRKN-201ENST00000338468 FLGP20930 4061 aaPredicted RBP7.93□□□□□ -1.14
PRKN-201ENST00000338468 LINC00313P59037 77 aa7.93□□□□□ -1.14
PRKN-201ENST00000338468 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
PRKN-201ENST00000338468 Q6ZQT0 140 aa7.92□□□□□ -1.14
PRKN-201ENST00000338468 TAX1BP3O14907 124 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms