RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 NBEAL1Q6ZS30 2694 aa8.35□□□□□ -1.07
RC3H2-201ENST00000335387 VPS13DQ5THJ4 4388 aa8.33□□□□□ -1.08
RC3H2-201ENST00000335387 DNAH7Q8WXX0 4024 aa8.33□□□□□ -1.08
RC3H2-201ENST00000335387 HCG22E2RYF7 251 aa8.33□□□□□ -1.08
RC3H2-201ENST00000335387 KRTAP13-1Q8IUC0 172 aa8.33□□□□□ -1.08
RC3H2-201ENST00000335387 LRCOL1A6NCL2 159 aa8.32□□□□□ -1.08
RC3H2-201ENST00000335387 KRTAP29-1A8MX34 341 aaPredicted RBP8.32□□□□□ -1.08
RC3H2-201ENST00000335387 HIGD2AQ9BW72 106 aa8.32□□□□□ -1.08
RC3H2-201ENST00000335387 MEGF8Q7Z7M0 2845 aa8.31□□□□□ -1.08
RC3H2-201ENST00000335387 PSCAO43653 123 aa8.31□□□□□ -1.08
RC3H2-201ENST00000335387 PLECQ15149 4684 aaKnown RBP8.31□□□□□ -1.08
RC3H2-201ENST00000335387 C9orf163Q8N9P6 203 aa8.31□□□□□ -1.08
RC3H2-201ENST00000335387 KRTAP11-1Q8IUC1 163 aa8.3□□□□□ -1.08
RC3H2-201ENST00000335387 PRKDCP78527 4128 aaKnown RBP8.3□□□□□ -1.08
RC3H2-201ENST00000335387 PRLHP81277 87 aa8.29□□□□□ -1.08
RC3H2-201ENST00000335387 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
RC3H2-201ENST00000335387 FAM30AQ9NZY2 134 aa8.29□□□□□ -1.08
RC3H2-201ENST00000335387 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.28□□□□□ -1.08
RC3H2-201ENST00000335387 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
RC3H2-201ENST00000335387 CYP4F30PQ9H0H9 118 aa8.28□□□□□ -1.08
RC3H2-201ENST00000335387 CSMD3Q7Z407 3707 aa8.28□□□□□ -1.08
RC3H2-201ENST00000335387 LINC00474Q9P2X8 69 aa8.28□□□□□ -1.08
RC3H2-201ENST00000335387 PRB2P02812 416 aaPredicted RBP8.27□□□□□ -1.09
RC3H2-201ENST00000335387 LINC00472Q9H8W2 130 aa8.27□□□□□ -1.09
RC3H2-201ENST00000335387 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
RC3H2-201ENST00000335387 hDV103S1A0JD37 113 aa8.25□□□□□ -1.09
RC3H2-201ENST00000335387 H3BPC8 53 aa8.25□□□□□ -1.09
RC3H2-201ENST00000335387 UBE2AP49459 152 aa8.25□□□□□ -1.09
RC3H2-201ENST00000335387 COL7A1Q02388 2944 aa8.25□□□□□ -1.09
RC3H2-201ENST00000335387 DNAH17Q9UFH2 4485 aa8.24□□□□□ -1.09
RC3H2-201ENST00000335387 RPL37AP61513 92 aaKnown RBP8.24□□□□□ -1.09
RC3H2-201ENST00000335387 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
RC3H2-201ENST00000335387 HECTD4Q9Y4D8 3996 aa8.24□□□□□ -1.09
RC3H2-201ENST00000335387 A0A087WSZ3 146 aa8.23□□□□□ -1.09
RC3H2-201ENST00000335387 FAM229BQ4G0N7 80 aa8.23□□□□□ -1.09
RC3H2-201ENST00000335387 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
RC3H2-201ENST00000335387 IGKV2-24A0A0C4DH68 120 aa8.23□□□□□ -1.09
RC3H2-201ENST00000335387 LINC00483Q53H64 154 aa8.23□□□□□ -1.09
RC3H2-201ENST00000335387 A8MWP4 228 aa8.22□□□□□ -1.09
RC3H2-201ENST00000335387 NDUFB1O75438 58 aa8.22□□□□□ -1.09
RC3H2-201ENST00000335387 ASB16-AS1Q495Z4 193 aa8.22□□□□□ -1.09
RC3H2-201ENST00000335387 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.09
RC3H2-201ENST00000335387 DNAH6Q9C0G6 4158 aa8.21□□□□□ -1.1
RC3H2-201ENST00000335387 A0A0G2JQZ4 141 aa8.2□□□□□ -1.1
RC3H2-201ENST00000335387 UBE2DNLQ8IWF7 75 aa8.2□□□□□ -1.1
RC3H2-201ENST00000335387 SPACA4Q8TDM5 124 aa8.2□□□□□ -1.1
RC3H2-201ENST00000335387 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
RC3H2-201ENST00000335387 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
RC3H2-201ENST00000335387 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
RC3H2-201ENST00000335387 TRAV22A0A0B4J277 110 aa8.18□□□□□ -1.1
RC3H2-201ENST00000335387 Q1T7F1 81 aa8.18□□□□□ -1.1
RC3H2-201ENST00000335387 NUPR2A6NF83 97 aa8.18□□□□□ -1.1
RC3H2-201ENST00000335387 LINC00336Q6ZUF6 198 aa8.17□□□□□ -1.1
RC3H2-201ENST00000335387 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
RC3H2-201ENST00000335387 Q96NJ1 140 aa8.16□□□□□ -1.1
RC3H2-201ENST00000335387 NOTCH1P46531 2555 aa8.15□□□□□ -1.1
RC3H2-201ENST00000335387 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.1
RC3H2-201ENST00000335387 STARD9Q9P2P6 4700 aa8.15□□□□□ -1.1
RC3H2-201ENST00000335387 C1orf64Q8NEQ6 169 aa8.15□□□□□ -1.1
RC3H2-201ENST00000335387 PANO1I0J062 215 aa8.15□□□□□ -1.11
RC3H2-201ENST00000335387 CASC2Q6XLA1 102 aa8.14□□□□□ -1.11
RC3H2-201ENST00000335387 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
RC3H2-201ENST00000335387 MP68P56378 58 aa8.14□□□□□ -1.11
RC3H2-201ENST00000335387 DEFB116Q30KQ4 102 aa8.11□□□□□ -1.11
RC3H2-201ENST00000335387 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
RC3H2-201ENST00000335387 MOBPQ13875 183 aa8.09□□□□□ -1.12
RC3H2-201ENST00000335387 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.12
RC3H2-201ENST00000335387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.12
RC3H2-201ENST00000335387 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
RC3H2-201ENST00000335387 H0Y9P7 68 aa8.07□□□□□ -1.12
RC3H2-201ENST00000335387 STAB2Q8WWQ8 2551 aa8.07□□□□□ -1.12
RC3H2-201ENST00000335387 A0A087WTM6 91 aa8.07□□□□□ -1.12
RC3H2-201ENST00000335387 Q6ZR54 194 aa8.06□□□□□ -1.12
RC3H2-201ENST00000335387 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
RC3H2-201ENST00000335387 IGLV5-52A0A0A0MRZ9 124 aa8.05□□□□□ -1.12
RC3H2-201ENST00000335387 TENM2Q9NT68 2774 aa8.05□□□□□ -1.12
RC3H2-201ENST00000335387 LINC00208Q96KT6 92 aa8.04□□□□□ -1.12
RC3H2-201ENST00000335387 ALMS1Q8TCU4 4167 aa8.04□□□□□ -1.12
RC3H2-201ENST00000335387 V9GYY9 64 aa8.02□□□□□ -1.13
RC3H2-201ENST00000335387 MPLKIPQ8TAP9 179 aa8.01□□□□□ -1.13
RC3H2-201ENST00000335387 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
RC3H2-201ENST00000335387 SRRM2Q9UQ35 2752 aaKnown RBP8.01□□□□□ -1.13
RC3H2-201ENST00000335387 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
RC3H2-201ENST00000335387 C1orf195Q5TG92 126 aa8□□□□□ -1.13
RC3H2-201ENST00000335387 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
RC3H2-201ENST00000335387 ZNF861PO60384 105 aa7.99□□□□□ -1.13
RC3H2-201ENST00000335387 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
RC3H2-201ENST00000335387 A0A1B0GVX0 72 aa7.99□□□□□ -1.13
RC3H2-201ENST00000335387 RTL8CO15255 209 aa7.99□□□□□ -1.13
RC3H2-201ENST00000335387 KMT2AQ03164 3969 aa7.98□□□□□ -1.13
RC3H2-201ENST00000335387 TGP01266 2768 aa7.98□□□□□ -1.13
RC3H2-201ENST00000335387 DNAH11Q96DT5 4516 aa7.97□□□□□ -1.13
RC3H2-201ENST00000335387 CD164Q04900 197 aa7.97□□□□□ -1.13
RC3H2-201ENST00000335387 DNAH5Q8TE73 4624 aa7.96□□□□□ -1.14
RC3H2-201ENST00000335387 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
RC3H2-201ENST00000335387 KRTAP13-3Q3SY46 172 aa7.93□□□□□ -1.14
RC3H2-201ENST00000335387 BRK1Q8WUW1 75 aa7.92□□□□□ -1.14
RC3H2-201ENST00000335387 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
RC3H2-201ENST00000335387 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
RC3H2-201ENST00000335387 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 340 ms