RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 UBE2DNLQ8IWF7 75 aa7.79□□□□□ -1.16
VPS33B-201ENST00000333371 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
VPS33B-201ENST00000333371 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.77□□□□□ -1.17
VPS33B-201ENST00000333371 B9D2Q9BPU9 175 aa7.77□□□□□ -1.17
VPS33B-201ENST00000333371 PKIGQ9Y2B9 76 aa7.77□□□□□ -1.17
VPS33B-201ENST00000333371 IGFL1Q6UW32 110 aa7.76□□□□□ -1.17
VPS33B-201ENST00000333371 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
VPS33B-201ENST00000333371 KRTAP11-1Q8IUC1 163 aa7.76□□□□□ -1.17
VPS33B-201ENST00000333371 CHTF8P0CG12 524 aa7.75□□□□□ -1.17
VPS33B-201ENST00000333371 MPLKIPQ8TAP9 179 aa7.74□□□□□ -1.17
VPS33B-201ENST00000333371 PSCAO43653 123 aa7.74□□□□□ -1.17
VPS33B-201ENST00000333371 A0A087WSZ3 146 aa7.73□□□□□ -1.17
VPS33B-201ENST00000333371 RPL37AP61513 92 aaKnown RBP7.73□□□□□ -1.17
VPS33B-201ENST00000333371 SEC61GP60059 68 aa7.72□□□□□ -1.17
VPS33B-201ENST00000333371 APLNQ9ULZ1 77 aa7.72□□□□□ -1.17
VPS33B-201ENST00000333371 A0A1B0GW54 56 aa7.72□□□□□ -1.17
VPS33B-201ENST00000333371 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
VPS33B-201ENST00000333371 WFDC13Q8IUB5 93 aa7.72□□□□□ -1.17
VPS33B-201ENST00000333371 LRCOL1A6NCL2 159 aa7.71□□□□□ -1.17
VPS33B-201ENST00000333371 PHF5AQ7RTV0 110 aaKnown RBP7.71□□□□□ -1.17
VPS33B-201ENST00000333371 C16orf90A8MZG2 172 aa7.7□□□□□ -1.18
VPS33B-201ENST00000333371 PRR4Q16378 134 aa7.7□□□□□ -1.18
VPS33B-201ENST00000333371 HCG22E2RYF7 251 aa7.7□□□□□ -1.18
VPS33B-201ENST00000333371 PLECQ15149 4684 aaKnown RBP7.69□□□□□ -1.18
VPS33B-201ENST00000333371 V9GYY9 64 aa7.69□□□□□ -1.18
VPS33B-201ENST00000333371 LCE6AA0A183 80 aa7.69□□□□□ -1.18
VPS33B-201ENST00000333371 NUPR2A6NF83 97 aa7.67□□□□□ -1.18
VPS33B-201ENST00000333371 UBE2AP49459 152 aa7.67□□□□□ -1.18
VPS33B-201ENST00000333371 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
VPS33B-201ENST00000333371 CNBPP62633 177 aaKnown RBP7.65□□□□□ -1.18
VPS33B-201ENST00000333371 C1orf195Q5TG92 126 aa7.65□□□□□ -1.19
VPS33B-201ENST00000333371 C14orf177Q52M58 125 aa7.64□□□□□ -1.19
VPS33B-201ENST00000333371 PANO1I0J062 215 aa7.63□□□□□ -1.19
VPS33B-201ENST00000333371 C1orf64Q8NEQ6 169 aa7.63□□□□□ -1.19
VPS33B-201ENST00000333371 BRK1Q8WUW1 75 aa7.63□□□□□ -1.19
VPS33B-201ENST00000333371 IGLV8-61A0A075B6I0 122 aa7.62□□□□□ -1.19
VPS33B-201ENST00000333371 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
VPS33B-201ENST00000333371 NBDYA0A0U1RRE5 68 aa7.61□□□□□ -1.19
VPS33B-201ENST00000333371 DYNC2H1Q8NCM8 4307 aaKnown RBP7.6□□□□□ -1.19
VPS33B-201ENST00000333371 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
VPS33B-201ENST00000333371 LINC00208Q96KT6 92 aa7.59□□□□□ -1.2
VPS33B-201ENST00000333371 KRTAP29-1A8MX34 341 aaPredicted RBP7.58□□□□□ -1.2
VPS33B-201ENST00000333371 CASC2Q6XLA1 102 aa7.56□□□□□ -1.2
VPS33B-201ENST00000333371 STARD9Q9P2P6 4700 aa7.56□□□□□ -1.2
VPS33B-201ENST00000333371 C9orf163Q8N9P6 203 aa7.56□□□□□ -1.2
VPS33B-201ENST00000333371 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
VPS33B-201ENST00000333371 PRR15Q8IV56 129 aa7.55□□□□□ -1.2
VPS33B-201ENST00000333371 SPRR1BP22528 89 aa7.54□□□□□ -1.2
VPS33B-201ENST00000333371 MP68P56378 58 aa7.54□□□□□ -1.2
VPS33B-201ENST00000333371 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
VPS33B-201ENST00000333371 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
VPS33B-201ENST00000333371 H0Y9J4 135 aa7.53□□□□□ -1.2
VPS33B-201ENST00000333371 H0Y9P7 68 aa7.53□□□□□ -1.2
VPS33B-201ENST00000333371 PRKDCP78527 4128 aaKnown RBP7.52□□□□□ -1.21
VPS33B-201ENST00000333371 A8MWP4 228 aa7.52□□□□□ -1.21
VPS33B-201ENST00000333371 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.52□□□□□ -1.21
VPS33B-201ENST00000333371 HECTD4Q9Y4D8 3996 aa7.52□□□□□ -1.21
VPS33B-201ENST00000333371 KMT2AQ03164 3969 aa7.52□□□□□ -1.21
VPS33B-201ENST00000333371 PSPHP1O15172 72 aa7.52□□□□□ -1.21
VPS33B-201ENST00000333371 DNAH8Q96JB1 4490 aa7.52□□□□□ -1.21
VPS33B-201ENST00000333371 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
VPS33B-201ENST00000333371 CYP4F30PQ9H0H9 118 aa7.5□□□□□ -1.21
VPS33B-201ENST00000333371 KRTAP13-1Q8IUC0 172 aa7.49□□□□□ -1.21
VPS33B-201ENST00000333371 VPS13DQ5THJ4 4388 aa7.48□□□□□ -1.21
VPS33B-201ENST00000333371 MEGF8Q7Z7M0 2845 aa7.48□□□□□ -1.21
VPS33B-201ENST00000333371 MMP24-AS1A0A0U1RRL7 71 aa7.48□□□□□ -1.21
VPS33B-201ENST00000333371 TGP01266 2768 aa7.48□□□□□ -1.21
VPS33B-201ENST00000333371 DNAH2Q9P225 4427 aa7.48□□□□□ -1.21
VPS33B-201ENST00000333371 ANAPC11Q9NYG5 84 aa7.48□□□□□ -1.21
VPS33B-201ENST00000333371 NDUFB1O75438 58 aa7.47□□□□□ -1.21
VPS33B-201ENST00000333371 Q1T7F1 81 aa7.46□□□□□ -1.21
VPS33B-201ENST00000333371 Q96NJ1 140 aa7.46□□□□□ -1.22
VPS33B-201ENST00000333371 DNAH17Q9UFH2 4485 aa7.45□□□□□ -1.22
VPS33B-201ENST00000333371 A0A087WTM6 91 aa7.45□□□□□ -1.22
VPS33B-201ENST00000333371 FBN3Q75N90 2809 aa7.44□□□□□ -1.22
VPS33B-201ENST00000333371 MOBPQ13875 183 aa7.44□□□□□ -1.22
VPS33B-201ENST00000333371 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
VPS33B-201ENST00000333371 A8MUN3 132 aa7.43□□□□□ -1.22
VPS33B-201ENST00000333371 PMAIP1Q13794 54 aa7.43□□□□□ -1.22
VPS33B-201ENST00000333371 DNHD1Q96M86 4753 aa7.42□□□□□ -1.22
VPS33B-201ENST00000333371 PCOTHQ58A44 107 aa7.42□□□□□ -1.22
VPS33B-201ENST00000333371 A8MU10 97 aa7.41□□□□□ -1.22
VPS33B-201ENST00000333371 RTL8CO15255 209 aa7.41□□□□□ -1.22
VPS33B-201ENST00000333371 Q6ZR54 194 aa7.41□□□□□ -1.22
VPS33B-201ENST00000333371 LY6G6CO95867 125 aa7.4□□□□□ -1.22
VPS33B-201ENST00000333371 IGHV6-1A0A0B4J1U7 121 aa7.4□□□□□ -1.23
VPS33B-201ENST00000333371 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.23
VPS33B-201ENST00000333371 A0A087X002 238 aa7.39□□□□□ -1.23
VPS33B-201ENST00000333371 C1orf134Q5TEV5 83 aa7.39□□□□□ -1.23
VPS33B-201ENST00000333371 NOTCH2NLQ7Z3S9 236 aa7.39□□□□□ -1.23
VPS33B-201ENST00000333371 SPANXA2-OT1Q8N9U9 137 aa7.38□□□□□ -1.23
VPS33B-201ENST00000333371 H3BPC8 53 aa7.37□□□□□ -1.23
VPS33B-201ENST00000333371 NDUFS5O43920 106 aa7.37□□□□□ -1.23
VPS33B-201ENST00000333371 WWC2-AS2Q96NR7 200 aa7.37□□□□□ -1.23
VPS33B-201ENST00000333371 DNAH6Q9C0G6 4158 aa7.37□□□□□ -1.23
VPS33B-201ENST00000333371 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
VPS33B-201ENST00000333371 IGLV5-52A0A0A0MRZ9 124 aa7.36□□□□□ -1.23
VPS33B-201ENST00000333371 CD164Q04900 197 aa7.36□□□□□ -1.23
VPS33B-201ENST00000333371 LINC00483Q53H64 154 aa7.35□□□□□ -1.23
VPS33B-201ENST00000333371 Q5VV11 94 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms