RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PKD1P98161 4303 aa5.99□□□□□ -1.45
C11orf54-201ENST00000331239 KRTAP10-1P60331 282 aa5.98□□□□□ -1.45
C11orf54-201ENST00000331239 PMAIP1Q13794 54 aa5.98□□□□□ -1.45
C11orf54-201ENST00000331239 IGKV2-24A0A0C4DH68 120 aa5.98□□□□□ -1.45
C11orf54-201ENST00000331239 MRPL55Q7Z7F7 128 aaKnown RBP5.98□□□□□ -1.45
C11orf54-201ENST00000331239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.97□□□□□ -1.45
C11orf54-201ENST00000331239 TRBV7-4A0A0J9YYF1 115 aa5.97□□□□□ -1.45
C11orf54-201ENST00000331239 A0A0U1RQV1 116 aa5.96□□□□□ -1.45
C11orf54-201ENST00000331239 A0A1W2PNN7 141 aa5.96□□□□□ -1.45
C11orf54-201ENST00000331239 PRYO14603 147 aa5.96□□□□□ -1.45
C11orf54-201ENST00000331239 Q6ZVQ6 151 aa5.96□□□□□ -1.45
C11orf54-201ENST00000331239 KCNQ1DNQ9H478 68 aa5.96□□□□□ -1.45
C11orf54-201ENST00000331239 EPPK1P58107 5090 aaKnown RBP5.96□□□□□ -1.46
C11orf54-201ENST00000331239 SERTAD4-AS1Q5TG53 156 aa5.96□□□□□ -1.46
C11orf54-201ENST00000331239 DNAH8Q96JB1 4490 aa5.96□□□□□ -1.46
C11orf54-201ENST00000331239 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
C11orf54-201ENST00000331239 LINC01547P58512 204 aaPredicted RBP5.95□□□□□ -1.46
C11orf54-201ENST00000331239 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
C11orf54-201ENST00000331239 CDK2AP2O75956 126 aa5.95□□□□□ -1.46
C11orf54-201ENST00000331239 CHTF8P0CG12 524 aa5.95□□□□□ -1.46
C11orf54-201ENST00000331239 C7orf33Q8WU49 177 aa5.95□□□□□ -1.46
C11orf54-201ENST00000331239 HAMPP81172 84 aa5.94□□□□□ -1.46
C11orf54-201ENST00000331239 DNAH5Q8TE73 4624 aa5.94□□□□□ -1.46
C11orf54-201ENST00000331239 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
C11orf54-201ENST00000331239 PANO1I0J062 215 aa5.93□□□□□ -1.46
C11orf54-201ENST00000331239 CYSTM1Q9H1C7 97 aa5.93□□□□□ -1.46
C11orf54-201ENST00000331239 SPRR1AP35321 89 aa5.93□□□□□ -1.46
C11orf54-201ENST00000331239 CXCL6P80162 114 aa5.93□□□□□ -1.46
C11orf54-201ENST00000331239 CIRBP-AS1Q8TBR5 109 aa5.93□□□□□ -1.46
C11orf54-201ENST00000331239 H0Y9J4 135 aa5.92□□□□□ -1.46
C11orf54-201ENST00000331239 SCXQ7RTU7 201 aa5.92□□□□□ -1.46
C11orf54-201ENST00000331239 FAM30AQ9NZY2 134 aa5.92□□□□□ -1.46
C11orf54-201ENST00000331239 FUSP35637 526 aaKnown RBP eCLIP5.9□□□□□ -1.46
C11orf54-201ENST00000331239 UBE2BP63146 152 aa5.9□□□□□ -1.46
C11orf54-201ENST00000331239 REG3GQ6UW15 175 aa5.9□□□□□ -1.46
C11orf54-201ENST00000331239 BCE1O60756 84 aa5.9□□□□□ -1.47
C11orf54-201ENST00000331239 DYNC1H1Q14204 4646 aaKnown RBP5.9□□□□□ -1.47
C11orf54-201ENST00000331239 PHF5AQ7RTV0 110 aaKnown RBP5.89□□□□□ -1.47
C11orf54-201ENST00000331239 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
C11orf54-201ENST00000331239 KRTAP4-16G5E9R7 235 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-201ENST00000331239 Q6ZRX8 168 aa5.88□□□□□ -1.47
C11orf54-201ENST00000331239 DHRS4-AS1Q9P1J3 65 aa5.88□□□□□ -1.47
C11orf54-201ENST00000331239 TRAV7A0A075B6U4 112 aa5.88□□□□□ -1.47
C11orf54-201ENST00000331239 RPL37AP8A6NKH3 93 aa5.87□□□□□ -1.47
C11orf54-201ENST00000331239 Q8N377 158 aa5.87□□□□□ -1.47
C11orf54-201ENST00000331239 DEFB105AQ8NG35 78 aa5.87□□□□□ -1.47
C11orf54-201ENST00000331239 ETDCA0A1B0GVM5 59 aa5.86□□□□□ -1.47
C11orf54-201ENST00000331239 C20orf197Q8N268 126 aa5.86□□□□□ -1.47
C11orf54-201ENST00000331239 IGLV5-48A0A075B6I7 105 aa5.85□□□□□ -1.47
C11orf54-201ENST00000331239 Q9BRP9 147 aa5.85□□□□□ -1.47
C11orf54-201ENST00000331239 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
C11orf54-201ENST00000331239 PSORS1C2Q9UIG4 136 aa5.85□□□□□ -1.47
C11orf54-201ENST00000331239 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
C11orf54-201ENST00000331239 PKHD1P08F94 4074 aa5.84□□□□□ -1.47
C11orf54-201ENST00000331239 SMIM26A0A096LP01 95 aa5.84□□□□□ -1.47
C11orf54-201ENST00000331239 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
C11orf54-201ENST00000331239 KRTAP13-1Q8IUC0 172 aa5.84□□□□□ -1.47
C11orf54-201ENST00000331239 NREPQ16612 68 aa5.84□□□□□ -1.47
C11orf54-201ENST00000331239 PLA2G1BP04054 148 aaKnown RBP5.83□□□□□ -1.48
C11orf54-201ENST00000331239 ZNF861PO60384 105 aa5.83□□□□□ -1.48
C11orf54-201ENST00000331239 IGLV7-43P04211 117 aa5.83□□□□□ -1.48
C11orf54-201ENST00000331239 PRR15Q8IV56 129 aa5.83□□□□□ -1.48
C11orf54-201ENST00000331239 RPL37AP61513 92 aaKnown RBP5.82□□□□□ -1.48
C11orf54-201ENST00000331239 C1orf137Q5JT78 98 aa5.82□□□□□ -1.48
C11orf54-201ENST00000331239 ST20-AS1Q8NBB2 130 aa5.82□□□□□ -1.48
C11orf54-201ENST00000331239 A0A1B0GW54 56 aa5.81□□□□□ -1.48
C11orf54-201ENST00000331239 BPY2O14599 106 aa5.81□□□□□ -1.48
C11orf54-201ENST00000331239 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
C11orf54-201ENST00000331239 UBE2AP49459 152 aa5.81□□□□□ -1.48
C11orf54-201ENST00000331239 KLKP1Q107X0 134 aa5.81□□□□□ -1.48
C11orf54-201ENST00000331239 KRTAP11-1Q8IUC1 163 aa5.81□□□□□ -1.48
C11orf54-201ENST00000331239 Q8N9L7 120 aa5.81□□□□□ -1.48
C11orf54-201ENST00000331239 ZNF706Q9Y5V0 76 aaPredicted RBP5.81□□□□□ -1.48
C11orf54-201ENST00000331239 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
C11orf54-201ENST00000331239 ERC2-IT1O76042 136 aa5.8□□□□□ -1.48
C11orf54-201ENST00000331239 SPINK6Q6UWN8 80 aa5.8□□□□□ -1.48
C11orf54-201ENST00000331239 Q8NBF4 154 aa5.8□□□□□ -1.48
C11orf54-201ENST00000331239 H7BZZ5 65 aa5.79□□□□□ -1.48
C11orf54-201ENST00000331239 PRR26Q8N8Z3 221 aa5.79□□□□□ -1.48
C11orf54-201ENST00000331239 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
C11orf54-201ENST00000331239 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
C11orf54-201ENST00000331239 Q8N1X5 172 aa5.78□□□□□ -1.48
C11orf54-201ENST00000331239 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
C11orf54-201ENST00000331239 SPRR1BP22528 89 aa5.77□□□□□ -1.49
C11orf54-201ENST00000331239 SPRR4Q96PI1 79 aa5.77□□□□□ -1.49
C11orf54-201ENST00000331239 BIRC6Q9NR09 4857 aa5.76□□□□□ -1.49
C11orf54-201ENST00000331239 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
C11orf54-201ENST00000331239 F8WEM9 126 aa5.75□□□□□ -1.49
C11orf54-201ENST00000331239 NDUFC1O43677 76 aa5.75□□□□□ -1.49
C11orf54-201ENST00000331239 PRLHP81277 87 aa5.75□□□□□ -1.49
C11orf54-201ENST00000331239 FAM229BQ4G0N7 80 aa5.75□□□□□ -1.49
C11orf54-201ENST00000331239 LINC00483Q53H64 154 aa5.75□□□□□ -1.49
C11orf54-201ENST00000331239 SMIM29Q86T20 159 aa5.75□□□□□ -1.49
C11orf54-201ENST00000331239 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
C11orf54-201ENST00000331239 TMEM254Q8TBM7 123 aa5.74□□□□□ -1.49
C11orf54-201ENST00000331239 HIGD2AQ9BW72 106 aa5.74□□□□□ -1.49
C11orf54-201ENST00000331239 RYR1P21817 5038 aa5.74□□□□□ -1.49
C11orf54-201ENST00000331239 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
C11orf54-201ENST00000331239 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
C11orf54-201ENST00000331239 Q5VSD8 79 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms