RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TMEM254Q8TBM7 123 aa13.95□□□□□ -0.18
PNKP-201ENST00000322344 DSCR10P59022 87 aa13.95□□□□□ -0.18
PNKP-201ENST00000322344 KRTAP11-1Q8IUC1 163 aa13.94□□□□□ -0.18
PNKP-201ENST00000322344 COL7A1Q02388 2944 aa13.92□□□□□ -0.18
PNKP-201ENST00000322344 SVIPQ8NHG7 77 aa13.88□□□□□ -0.19
PNKP-201ENST00000322344 LYSTQ99698 3801 aa13.88□□□□□ -0.19
PNKP-201ENST00000322344 K7EQZ3 153 aa13.87□□□□□ -0.19
PNKP-201ENST00000322344 OXTP01178 125 aa13.87□□□□□ -0.19
PNKP-201ENST00000322344 A0A0G2JQZ4 141 aa13.86□□□□□ -0.19
PNKP-201ENST00000322344 A0A0U1RQV1 116 aa13.86□□□□□ -0.19
PNKP-201ENST00000322344 ATP5EP56381 51 aaPredicted RBP13.86□□□□□ -0.19
PNKP-201ENST00000322344 SERP1Q9Y6X1 66 aa13.86□□□□□ -0.19
PNKP-201ENST00000322344 A0A087WSZ3 146 aa13.85□□□□□ -0.19
PNKP-201ENST00000322344 PANO1I0J062 215 aa13.81□□□□□ -0.2
PNKP-201ENST00000322344 KRTAP13-1Q8IUC0 172 aa13.81□□□□□ -0.2
PNKP-201ENST00000322344 SPACA4Q8TDM5 124 aa13.81□□□□□ -0.2
PNKP-201ENST00000322344 FAM30AQ9NZY2 134 aa13.81□□□□□ -0.2
PNKP-201ENST00000322344 PLECQ15149 4684 aaKnown RBP13.81□□□□□ -0.2
PNKP-201ENST00000322344 HCG22E2RYF7 251 aa13.81□□□□□ -0.2
PNKP-201ENST00000322344 LCE6AA0A183 80 aa13.8□□□□□ -0.2
PNKP-201ENST00000322344 A0A087WTM6 91 aa13.78□□□□□ -0.2
PNKP-201ENST00000322344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.75□□□□□ -0.21
PNKP-201ENST00000322344 CSMD3Q7Z407 3707 aa13.74□□□□□ -0.21
PNKP-201ENST00000322344 DNAH7Q8WXX0 4024 aa13.73□□□□□ -0.21
PNKP-201ENST00000322344 DEFB116Q30KQ4 102 aa13.73□□□□□ -0.21
PNKP-201ENST00000322344 VPS13DQ5THJ4 4388 aa13.71□□□□□ -0.21
PNKP-201ENST00000322344 C5orf47Q569G3 176 aa13.69□□□□□ -0.22
PNKP-201ENST00000322344 Q6ZR54 194 aa13.68□□□□□ -0.22
PNKP-201ENST00000322344 RTL8CO15255 209 aa13.68□□□□□ -0.22
PNKP-201ENST00000322344 LINC00472Q9H8W2 130 aa13.68□□□□□ -0.22
PNKP-201ENST00000322344 Q5XG85 94 aa13.66□□□□□ -0.22
PNKP-201ENST00000322344 A8MWP4 228 aa13.64□□□□□ -0.23
PNKP-201ENST00000322344 PRR15Q8IV56 129 aa13.64□□□□□ -0.23
PNKP-201ENST00000322344 RPL37AP61513 92 aaKnown RBP13.64□□□□□ -0.23
PNKP-201ENST00000322344 LINC00483Q53H64 154 aa13.64□□□□□ -0.23
PNKP-201ENST00000322344 WFDC13Q8IUB5 93 aa13.64□□□□□ -0.23
PNKP-201ENST00000322344 ZCCHC13Q8WW36 166 aaKnown RBP13.64□□□□□ -0.23
PNKP-201ENST00000322344 ZNF706Q9Y5V0 76 aaPredicted RBP13.64□□□□□ -0.23
PNKP-201ENST00000322344 KRTAP29-1A8MX34 341 aaPredicted RBP13.62□□□□□ -0.23
PNKP-201ENST00000322344 STARD9Q9P2P6 4700 aa13.61□□□□□ -0.23
PNKP-201ENST00000322344 SMIM26A0A096LP01 95 aa13.61□□□□□ -0.23
PNKP-201ENST00000322344 PLAC8Q9NZF1 115 aa13.61□□□□□ -0.23
PNKP-201ENST00000322344 TENM2Q9NT68 2774 aa13.61□□□□□ -0.23
PNKP-201ENST00000322344 IGLV5-52A0A0A0MRZ9 124 aa13.59□□□□□ -0.23
PNKP-201ENST00000322344 CASC2Q6XLA1 102 aa13.57□□□□□ -0.24
PNKP-201ENST00000322344 PSORS1C2Q9UIG4 136 aa13.57□□□□□ -0.24
PNKP-201ENST00000322344 IGLV9-49A0A0B4J1Y8 123 aa13.56□□□□□ -0.24
PNKP-201ENST00000322344 C4orf26Q17RF5 130 aa13.55□□□□□ -0.24
PNKP-201ENST00000322344 C1orf134Q5TEV5 83 aa13.55□□□□□ -0.24
PNKP-201ENST00000322344 MP68P56378 58 aa13.54□□□□□ -0.24
PNKP-201ENST00000322344 PRKDCP78527 4128 aaKnown RBP13.54□□□□□ -0.24
PNKP-201ENST00000322344 ZNF861PO60384 105 aa13.52□□□□□ -0.25
PNKP-201ENST00000322344 NDUFB1O75438 58 aa13.52□□□□□ -0.25
PNKP-201ENST00000322344 WWC2-AS2Q96NR7 200 aa13.49□□□□□ -0.25
PNKP-201ENST00000322344 H3BPC8 53 aa13.48□□□□□ -0.25
PNKP-201ENST00000322344 DNAH17Q9UFH2 4485 aa13.48□□□□□ -0.25
PNKP-201ENST00000322344 FP248Q71RG6 208 aaPredicted RBP13.47□□□□□ -0.25
PNKP-201ENST00000322344 HRCT1Q6UXD1 115 aa13.47□□□□□ -0.25
PNKP-201ENST00000322344 Q96NJ1 140 aa13.46□□□□□ -0.25
PNKP-201ENST00000322344 SRRM2Q9UQ35 2752 aaKnown RBP13.46□□□□□ -0.26
PNKP-201ENST00000322344 MMP24-AS1A0A0U1RRL7 71 aa13.46□□□□□ -0.26
PNKP-201ENST00000322344 MOBPQ13875 183 aa13.43□□□□□ -0.26
PNKP-201ENST00000322344 HECTD4Q9Y4D8 3996 aa13.43□□□□□ -0.26
PNKP-201ENST00000322344 TRAV22A0A0B4J277 110 aa13.42□□□□□ -0.26
PNKP-201ENST00000322344 H0Y9P7 68 aa13.42□□□□□ -0.26
PNKP-201ENST00000322344 LINC00208Q96KT6 92 aa13.41□□□□□ -0.26
PNKP-201ENST00000322344 CYP4F30PQ9H0H9 118 aa13.4□□□□□ -0.26
PNKP-201ENST00000322344 hDV103S1A0JD37 113 aa13.4□□□□□ -0.26
PNKP-201ENST00000322344 LY6G6CO95867 125 aa13.4□□□□□ -0.26
PNKP-201ENST00000322344 DNAH2Q9P225 4427 aa13.39□□□□□ -0.27
PNKP-201ENST00000322344 IGLV7-43P04211 117 aa13.37□□□□□ -0.27
PNKP-201ENST00000322344 FAM229BQ4G0N7 80 aa13.37□□□□□ -0.27
PNKP-201ENST00000322344 ASB16-AS1Q495Z4 193 aa13.36□□□□□ -0.27
PNKP-201ENST00000322344 ANAPC11Q9NYG5 84 aa13.34□□□□□ -0.27
PNKP-201ENST00000322344 C1orf64Q8NEQ6 169 aa13.34□□□□□ -0.27
PNKP-201ENST00000322344 C8orf17Q9NRJ1 99 aa13.34□□□□□ -0.27
PNKP-201ENST00000322344 MEGF8Q7Z7M0 2845 aa13.33□□□□□ -0.28
PNKP-201ENST00000322344 TP53AIP1Q9HCN2 124 aa13.32□□□□□ -0.28
PNKP-201ENST00000322344 KMT2AQ03164 3969 aa13.32□□□□□ -0.28
PNKP-201ENST00000322344 A0A1B0GVX0 72 aa13.32□□□□□ -0.28
PNKP-201ENST00000322344 CDK2AP2O75956 126 aa13.32□□□□□ -0.28
PNKP-201ENST00000322344 SPANXA2-OT1Q8N9U9 137 aa13.3□□□□□ -0.28
PNKP-201ENST00000322344 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
PNKP-201ENST00000322344 DNAH6Q9C0G6 4158 aa13.28□□□□□ -0.28
PNKP-201ENST00000322344 IGHV6-1A0A0B4J1U7 121 aa13.25□□□□□ -0.29
PNKP-201ENST00000322344 CD164Q04900 197 aa13.25□□□□□ -0.29
PNKP-201ENST00000322344 PRR4Q16378 134 aa13.24□□□□□ -0.29
PNKP-201ENST00000322344 MPLKIPQ8TAP9 179 aa13.24□□□□□ -0.29
PNKP-201ENST00000322344 CIRBP-AS1Q8TBR5 109 aa13.23□□□□□ -0.29
PNKP-201ENST00000322344 KRTAP10-2P60368 255 aa13.22□□□□□ -0.29
PNKP-201ENST00000322344 SSBP3-AS1Q7Z2R9 100 aa13.22□□□□□ -0.29
PNKP-201ENST00000322344 MRPL34Q9BQ48 92 aaKnown RBP13.2□□□□□ -0.3
PNKP-201ENST00000322344 DNHD1Q96M86 4753 aa13.2□□□□□ -0.3
PNKP-201ENST00000322344 FBN3Q75N90 2809 aa13.19□□□□□ -0.3
PNKP-201ENST00000322344 KRTAP21-3Q3LHN1 58 aa13.17□□□□□ -0.3
PNKP-201ENST00000322344 Q1T7F1 81 aa13.15□□□□□ -0.3
PNKP-201ENST00000322344 LINC00336Q6ZUF6 198 aa13.15□□□□□ -0.3
PNKP-201ENST00000322344 Q6ZSA8 131 aa13.15□□□□□ -0.3
PNKP-201ENST00000322344 NDUFS5O43920 106 aa13.14□□□□□ -0.31
PNKP-201ENST00000322344 FRAS1Q86XX4 4008 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms