RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ANK3Q12955 4377 aaKnown RBP9.15□□□□□ -0.94
PABPC1-201ENST00000318607 MP68P56378 58 aa9.15□□□□□ -0.94
PABPC1-201ENST00000318607 Q8NBF4 154 aa9.15□□□□□ -0.94
PABPC1-201ENST00000318607 HCG22E2RYF7 251 aa9.14□□□□□ -0.95
PABPC1-201ENST00000318607 NDUFS5O43920 106 aa9.14□□□□□ -0.95
PABPC1-201ENST00000318607 TRAV22A0A0B4J277 110 aa9.13□□□□□ -0.95
PABPC1-201ENST00000318607 CHTF8P0CG12 524 aa9.13□□□□□ -0.95
PABPC1-201ENST00000318607 DHRS4-AS1Q9P1J3 65 aa9.12□□□□□ -0.95
PABPC1-201ENST00000318607 C8orf87E5RJ46 101 aa9.12□□□□□ -0.95
PABPC1-201ENST00000318607 hDV103S1A0JD37 113 aa9.11□□□□□ -0.95
PABPC1-201ENST00000318607 UBE2AP49459 152 aa9.11□□□□□ -0.95
PABPC1-201ENST00000318607 PRR15LQ9BU68 103 aa9.11□□□□□ -0.95
PABPC1-201ENST00000318607 KCNQ1DNQ9H478 68 aa9.11□□□□□ -0.95
PABPC1-201ENST00000318607 KRTAP26-1Q6PEX3 210 aa9.09□□□□□ -0.95
PABPC1-201ENST00000318607 KRTAP10-11P60412 298 aa9.08□□□□□ -0.96
PABPC1-201ENST00000318607 REG3GQ6UW15 175 aa9.08□□□□□ -0.96
PABPC1-201ENST00000318607 IGFL1Q6UW32 110 aa9.07□□□□□ -0.96
PABPC1-201ENST00000318607 IGLV1-50A0A075B6I6 118 aa9.07□□□□□ -0.96
PABPC1-201ENST00000318607 H0Y9P7 68 aa9.07□□□□□ -0.96
PABPC1-201ENST00000318607 IGLV9-49A0A0B4J1Y8 123 aa9.06□□□□□ -0.96
PABPC1-201ENST00000318607 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
PABPC1-201ENST00000318607 A6NED7 52 aa9.05□□□□□ -0.96
PABPC1-201ENST00000318607 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
PABPC1-201ENST00000318607 PRR15Q8IV56 129 aa9.04□□□□□ -0.96
PABPC1-201ENST00000318607 LINC00588Q9Y4M8 146 aa9.04□□□□□ -0.96
PABPC1-201ENST00000318607 PHF5AQ7RTV0 110 aaKnown RBP9.03□□□□□ -0.96
PABPC1-201ENST00000318607 B9D2Q9BPU9 175 aa9.03□□□□□ -0.96
PABPC1-201ENST00000318607 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.97
PABPC1-201ENST00000318607 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
PABPC1-201ENST00000318607 CMYA5Q8N3K9 4069 aa9.01□□□□□ -0.97
PABPC1-201ENST00000318607 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
PABPC1-201ENST00000318607 UBE2DNLQ8IWF7 75 aa9□□□□□ -0.97
PABPC1-201ENST00000318607 KTN1-AS1Q86SY8 53 aa9□□□□□ -0.97
PABPC1-201ENST00000318607 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
PABPC1-201ENST00000318607 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
PABPC1-201ENST00000318607 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
PABPC1-201ENST00000318607 IGHV6-1A0A0B4J1U7 121 aa8.94□□□□□ -0.98
PABPC1-201ENST00000318607 TGP01266 2768 aa8.94□□□□□ -0.98
PABPC1-201ENST00000318607 TNP2Q05952 138 aa8.92□□□□□ -0.98
PABPC1-201ENST00000318607 KRTAP11-1Q8IUC1 163 aa8.92□□□□□ -0.98
PABPC1-201ENST00000318607 KRTAP4-16G5E9R7 235 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-201ENST00000318607 NDUFB1O75438 58 aa8.91□□□□□ -0.98
PABPC1-201ENST00000318607 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
PABPC1-201ENST00000318607 Q5VV11 94 aa8.89□□□□□ -0.99
PABPC1-201ENST00000318607 Q1T7F1 81 aa8.88□□□□□ -0.99
PABPC1-201ENST00000318607 DNAH10OSP0CZ25 163 aa8.88□□□□□ -0.99
PABPC1-201ENST00000318607 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
PABPC1-201ENST00000318607 COA5Q86WW8 74 aa8.87□□□□□ -0.99
PABPC1-201ENST00000318607 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
PABPC1-201ENST00000318607 PRAC1Q96KF2 57 aa8.86□□□□□ -0.99
PABPC1-201ENST00000318607 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
PABPC1-201ENST00000318607 KRTAP1-5Q9BYS1 174 aa8.86□□□□□ -0.99
PABPC1-201ENST00000318607 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
PABPC1-201ENST00000318607 DYNC2H1Q8NCM8 4307 aaKnown RBP8.85□□□□□ -0.99
PABPC1-201ENST00000318607 C16orf90A8MZG2 172 aa8.85□□□□□ -0.99
PABPC1-201ENST00000318607 SPRR1AP35321 89 aa8.84□□□□□ -0.99
PABPC1-201ENST00000318607 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
PABPC1-201ENST00000318607 KRTAP24-1Q3LI83 254 aa8.82□□□□□ -1
PABPC1-201ENST00000318607 H3BNG1 76 aa8.82□□□□□ -1
PABPC1-201ENST00000318607 LYSTQ99698 3801 aa8.81□□□□□ -1
PABPC1-201ENST00000318607 DNAH10Q8IVF4 4471 aa8.81□□□□□ -1
PABPC1-201ENST00000318607 K7EIL1 84 aa8.81□□□□□ -1
PABPC1-201ENST00000318607 A0A0A0MQY5 61 aa8.8□□□□□ -1
PABPC1-201ENST00000318607 A8MWP4 228 aa8.79□□□□□ -1
PABPC1-201ENST00000318607 PANO1I0J062 215 aa8.78□□□□□ -1
PABPC1-201ENST00000318607 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
PABPC1-201ENST00000318607 LCA10Q71F78 164 aa8.78□□□□□ -1
PABPC1-201ENST00000318607 FBN3Q75N90 2809 aa8.77□□□□□ -1.01
PABPC1-201ENST00000318607 CYP4F30PQ9H0H9 118 aa8.77□□□□□ -1.01
PABPC1-201ENST00000318607 MOBPQ13875 183 aa8.76□□□□□ -1.01
PABPC1-201ENST00000318607 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
PABPC1-201ENST00000318607 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
PABPC1-201ENST00000318607 LCE6AA0A183 80 aa8.74□□□□□ -1.01
PABPC1-201ENST00000318607 A0A087X002 238 aa8.73□□□□□ -1.01
PABPC1-201ENST00000318607 NOTCH2NLQ7Z3S9 236 aa8.73□□□□□ -1.01
PABPC1-201ENST00000318607 SPINK7P58062 85 aa8.73□□□□□ -1.01
PABPC1-201ENST00000318607 DNAH6Q9C0G6 4158 aa8.73□□□□□ -1.01
PABPC1-201ENST00000318607 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
PABPC1-201ENST00000318607 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
PABPC1-201ENST00000318607 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
PABPC1-201ENST00000318607 A0A1B0GW54 56 aa8.72□□□□□ -1.01
PABPC1-201ENST00000318607 CIRBP-AS1Q8TBR5 109 aa8.71□□□□□ -1.02
PABPC1-201ENST00000318607 IGLV8-61A0A075B6I0 122 aa8.71□□□□□ -1.02
PABPC1-201ENST00000318607 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
PABPC1-201ENST00000318607 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
PABPC1-201ENST00000318607 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
PABPC1-201ENST00000318607 C7orf65Q6ZTY9 151 aa8.68□□□□□ -1.02
PABPC1-201ENST00000318607 LINC00313P59037 77 aa8.68□□□□□ -1.02
PABPC1-201ENST00000318607 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
PABPC1-201ENST00000318607 ADM2Q7Z4H4 148 aa8.66□□□□□ -1.02
PABPC1-201ENST00000318607 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.03
PABPC1-201ENST00000318607 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.03
PABPC1-201ENST00000318607 LINC01554Q52M75 96 aa8.64□□□□□ -1.03
PABPC1-201ENST00000318607 HRES1P13985 223 aa8.62□□□□□ -1.03
PABPC1-201ENST00000318607 SPINK1P00995 79 aa8.62□□□□□ -1.03
PABPC1-201ENST00000318607 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
PABPC1-201ENST00000318607 IGLV7-46A0A075B6I9 117 aa8.6□□□□□ -1.03
PABPC1-201ENST00000318607 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
PABPC1-201ENST00000318607 ATP11AUNQ6ZP68 121 aa8.58□□□□□ -1.04
PABPC1-201ENST00000318607 MRPL34Q9BQ48 92 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms