RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 KRTAP1-5Q9BYS1 174 aa7.99□□□□□ -1.13
SH3PXD2A-201ENST00000315994 VPS13AQ96RL7 3174 aa7.98□□□□□ -1.13
SH3PXD2A-201ENST00000315994 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
SH3PXD2A-201ENST00000315994 FAM229BQ4G0N7 80 aa7.98□□□□□ -1.13
SH3PXD2A-201ENST00000315994 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.13
SH3PXD2A-201ENST00000315994 OCR1Q9BZK8 76 aa7.96□□□□□ -1.14
SH3PXD2A-201ENST00000315994 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
SH3PXD2A-201ENST00000315994 TNRC18O15417 2968 aaPredicted RBP7.93□□□□□ -1.14
SH3PXD2A-201ENST00000315994 M0R2T5 61 aa7.93□□□□□ -1.14
SH3PXD2A-201ENST00000315994 LCE6AA0A183 80 aa7.91□□□□□ -1.14
SH3PXD2A-201ENST00000315994 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
SH3PXD2A-201ENST00000315994 LAMA1P25391 3075 aa7.9□□□□□ -1.14
SH3PXD2A-201ENST00000315994 SPRR1BP22528 89 aa7.9□□□□□ -1.14
SH3PXD2A-201ENST00000315994 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.15
SH3PXD2A-201ENST00000315994 TEP1Q99973 2627 aaKnown RBP7.89□□□□□ -1.15
SH3PXD2A-201ENST00000315994 TEX15Q9BXT5 2789 aa7.88□□□□□ -1.15
SH3PXD2A-201ENST00000315994 VCANP13611 3396 aa7.87□□□□□ -1.15
SH3PXD2A-201ENST00000315994 DNAH14Q0VDD8 3507 aa7.86□□□□□ -1.15
SH3PXD2A-201ENST00000315994 CHD6Q8TD26 2715 aa7.85□□□□□ -1.15
SH3PXD2A-201ENST00000315994 FRYQ5TBA9 3013 aa7.84□□□□□ -1.15
SH3PXD2A-201ENST00000315994 COL6A5A8TX70 2615 aa7.83□□□□□ -1.16
SH3PXD2A-201ENST00000315994 Q5VSD8 79 aa7.83□□□□□ -1.16
SH3PXD2A-201ENST00000315994 SPTBN5Q9NRC6 3674 aaKnown RBP7.83□□□□□ -1.16
SH3PXD2A-201ENST00000315994 SETXQ7Z333 2677 aaKnown RBP7.82□□□□□ -1.16
SH3PXD2A-201ENST00000315994 UQCR11O14957 56 aa7.82□□□□□ -1.16
SH3PXD2A-201ENST00000315994 LINC01554Q52M75 96 aa7.82□□□□□ -1.16
SH3PXD2A-201ENST00000315994 BAHCC1Q9P281 2608 aa7.81□□□□□ -1.16
SH3PXD2A-201ENST00000315994 Q75L30 129 aa7.81□□□□□ -1.16
SH3PXD2A-201ENST00000315994 CELSR3Q9NYQ7 3312 aa7.81□□□□□ -1.16
SH3PXD2A-201ENST00000315994 Q6ZR54 194 aa7.8□□□□□ -1.16
SH3PXD2A-201ENST00000315994 H3BS24 57 aa7.8□□□□□ -1.16
SH3PXD2A-201ENST00000315994 KRTAP10-1P60331 282 aa7.79□□□□□ -1.16
SH3PXD2A-201ENST00000315994 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
SH3PXD2A-201ENST00000315994 MMP24-AS1A0A0U1RRL7 71 aa7.79□□□□□ -1.16
SH3PXD2A-201ENST00000315994 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
SH3PXD2A-201ENST00000315994 GCN1Q92616 2671 aaKnown RBP7.78□□□□□ -1.16
SH3PXD2A-201ENST00000315994 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
SH3PXD2A-201ENST00000315994 Q5VV11 94 aa7.77□□□□□ -1.17
SH3PXD2A-201ENST00000315994 Q8N1X5 172 aa7.77□□□□□ -1.17
SH3PXD2A-201ENST00000315994 COL6A3P12111 3177 aa7.77□□□□□ -1.17
SH3PXD2A-201ENST00000315994 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
SH3PXD2A-201ENST00000315994 STAB1Q9NY15 2570 aa7.77□□□□□ -1.17
SH3PXD2A-201ENST00000315994 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
SH3PXD2A-201ENST00000315994 LINC00472Q9H8W2 130 aa7.76□□□□□ -1.17
SH3PXD2A-201ENST00000315994 FLNCQ14315 2725 aa7.74□□□□□ -1.17
SH3PXD2A-201ENST00000315994 MAP1AP78559 2803 aaPredicted RBP7.74□□□□□ -1.17
SH3PXD2A-201ENST00000315994 KRTAP4-16G5E9R7 235 aaPredicted RBP7.74□□□□□ -1.17
SH3PXD2A-201ENST00000315994 ATMQ13315 3056 aa7.74□□□□□ -1.17
SH3PXD2A-201ENST00000315994 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
SH3PXD2A-201ENST00000315994 SPINT4Q6UDR6 99 aa7.73□□□□□ -1.17
SH3PXD2A-201ENST00000315994 PANO1I0J062 215 aa7.71□□□□□ -1.17
SH3PXD2A-201ENST00000315994 DMXL2Q8TDJ6 3036 aa7.71□□□□□ -1.17
SH3PXD2A-201ENST00000315994 FRYLO94915 3013 aa7.7□□□□□ -1.18
SH3PXD2A-201ENST00000315994 NOTCH1P46531 2555 aa7.7□□□□□ -1.18
SH3PXD2A-201ENST00000315994 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
SH3PXD2A-201ENST00000315994 ITPR2Q14571 2701 aa7.69□□□□□ -1.18
SH3PXD2A-201ENST00000315994 HRES1P13985 223 aa7.68□□□□□ -1.18
SH3PXD2A-201ENST00000315994 BOD1L1Q8NFC6 3051 aa7.68□□□□□ -1.18
SH3PXD2A-201ENST00000315994 A0A0D9SG42 100 aa7.68□□□□□ -1.18
SH3PXD2A-201ENST00000315994 LINC01558Q9Y6Z2 57 aa7.67□□□□□ -1.18
SH3PXD2A-201ENST00000315994 UBR5O95071 2799 aaPredicted RBP7.67□□□□□ -1.18
SH3PXD2A-201ENST00000315994 COL12A1Q99715 3063 aa7.67□□□□□ -1.18
SH3PXD2A-201ENST00000315994 ITPR1Q14643 2758 aa7.66□□□□□ -1.18
SH3PXD2A-201ENST00000315994 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
SH3PXD2A-201ENST00000315994 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
SH3PXD2A-201ENST00000315994 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
SH3PXD2A-201ENST00000315994 ADGRG4Q8IZF6 3080 aa7.65□□□□□ -1.18
SH3PXD2A-201ENST00000315994 EYSQ5T1H1 3165 aa7.65□□□□□ -1.19
SH3PXD2A-201ENST00000315994 KRTAP21-3Q3LHN1 58 aa7.64□□□□□ -1.19
SH3PXD2A-201ENST00000315994 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
SH3PXD2A-201ENST00000315994 UTP20O75691 2785 aaKnown RBP7.64□□□□□ -1.19
SH3PXD2A-201ENST00000315994 REV3LO60673 3130 aa7.64□□□□□ -1.19
SH3PXD2A-201ENST00000315994 NBEAL2Q6ZNJ1 2754 aa7.64□□□□□ -1.19
SH3PXD2A-201ENST00000315994 LRBAP50851 2863 aa7.63□□□□□ -1.19
SH3PXD2A-201ENST00000315994 KMT2BQ9UMN6 2715 aaPredicted RBP7.62□□□□□ -1.19
SH3PXD2A-201ENST00000315994 Q5W150 140 aa7.61□□□□□ -1.19
SH3PXD2A-201ENST00000315994 S4R3F8 94 aa7.6□□□□□ -1.19
SH3PXD2A-201ENST00000315994 KALRNO60229 2985 aa7.59□□□□□ -1.2
SH3PXD2A-201ENST00000315994 SPINK7P58062 85 aa7.56□□□□□ -1.2
SH3PXD2A-201ENST00000315994 DMXL1Q9Y485 3027 aa7.56□□□□□ -1.2
SH3PXD2A-201ENST00000315994 HIVEP1P15822 2718 aa7.56□□□□□ -1.2
SH3PXD2A-201ENST00000315994 APCP25054 2843 aa7.56□□□□□ -1.2
SH3PXD2A-201ENST00000315994 USP34Q70CQ2 3546 aa7.56□□□□□ -1.2
SH3PXD2A-201ENST00000315994 FREM2Q5SZK8 3169 aa7.55□□□□□ -1.2
SH3PXD2A-201ENST00000315994 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
SH3PXD2A-201ENST00000315994 KRTAP7-1Q8IUC3 87 aa7.55□□□□□ -1.2
SH3PXD2A-201ENST00000315994 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
SH3PXD2A-201ENST00000315994 NBEAL1Q6ZS30 2694 aa7.53□□□□□ -1.2
SH3PXD2A-201ENST00000315994 A0A087X002 238 aa7.53□□□□□ -1.2
SH3PXD2A-201ENST00000315994 TACC2O95359 2948 aa7.52□□□□□ -1.21
SH3PXD2A-201ENST00000315994 NBEAQ8NFP9 2946 aa7.52□□□□□ -1.21
SH3PXD2A-201ENST00000315994 A6NN06 94 aa7.47□□□□□ -1.21
SH3PXD2A-201ENST00000315994 KRTAP29-1A8MX34 341 aaPredicted RBP7.47□□□□□ -1.21
SH3PXD2A-201ENST00000315994 A0A1B0GU33 70 aa7.47□□□□□ -1.21
SH3PXD2A-201ENST00000315994 ASB16-AS1Q495Z4 193 aa7.46□□□□□ -1.22
SH3PXD2A-201ENST00000315994 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
SH3PXD2A-201ENST00000315994 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
SH3PXD2A-201ENST00000315994 ZZEF1O43149 2961 aa7.44□□□□□ -1.22
SH3PXD2A-201ENST00000315994 HRNRQ86YZ3 2850 aaPredicted RBP7.44□□□□□ -1.22
SH3PXD2A-201ENST00000315994 R4GN34 69 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms