RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
COL6A2-201ENST00000300527 PRR15Q8IV56 129 aa9.33□□□□□ -0.92
COL6A2-201ENST00000300527 COL6A5A8TX70 2615 aa9.33□□□□□ -0.92
COL6A2-201ENST00000300527 LCE6AA0A183 80 aa9.32□□□□□ -0.92
COL6A2-201ENST00000300527 UBE2AP49459 152 aa9.32□□□□□ -0.92
COL6A2-201ENST00000300527 NSD1Q96L73 2696 aaPredicted RBP9.32□□□□□ -0.92
COL6A2-201ENST00000300527 NDUFB1O75438 58 aa9.31□□□□□ -0.92
COL6A2-201ENST00000300527 CASC2Q6XLA1 102 aa9.31□□□□□ -0.92
COL6A2-201ENST00000300527 H0Y9J4 135 aa9.31□□□□□ -0.92
COL6A2-201ENST00000300527 STAB1Q9NY15 2570 aa9.29□□□□□ -0.92
COL6A2-201ENST00000300527 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
COL6A2-201ENST00000300527 A0A1B0GW54 56 aa9.29□□□□□ -0.92
COL6A2-201ENST00000300527 SPRR1AP35321 89 aa9.29□□□□□ -0.92
COL6A2-201ENST00000300527 KRTAP10-11P60412 298 aa9.27□□□□□ -0.93
COL6A2-201ENST00000300527 CYP4F30PQ9H0H9 118 aa9.27□□□□□ -0.93
COL6A2-201ENST00000300527 H3BNG1 76 aa9.27□□□□□ -0.93
COL6A2-201ENST00000300527 FBN1P35555 2871 aaKnown RBP9.26□□□□□ -0.93
COL6A2-201ENST00000300527 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
COL6A2-201ENST00000300527 Q5VV11 94 aa9.25□□□□□ -0.93
COL6A2-201ENST00000300527 A6NED7 52 aa9.25□□□□□ -0.93
COL6A2-201ENST00000300527 TLX1NBP0CAT3 122 aa9.24□□□□□ -0.93
COL6A2-201ENST00000300527 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
COL6A2-201ENST00000300527 PLA2G2DQ9UNK4 145 aa9.22□□□□□ -0.93
COL6A2-201ENST00000300527 CHTF8P0CG12 524 aa9.22□□□□□ -0.93
COL6A2-201ENST00000300527 NBEAL1Q6ZS30 2694 aa9.21□□□□□ -0.93
COL6A2-201ENST00000300527 NDUFS5O43920 106 aa9.2□□□□□ -0.94
COL6A2-201ENST00000300527 Q8N9P0 234 aaPredicted RBP9.2□□□□□ -0.94
COL6A2-201ENST00000300527 IGLV5-37A0A075B6J1 123 aa9.19□□□□□ -0.94
COL6A2-201ENST00000300527 CNBPP62633 177 aaKnown RBP9.19□□□□□ -0.94
COL6A2-201ENST00000300527 PHF5AQ7RTV0 110 aaKnown RBP9.19□□□□□ -0.94
COL6A2-201ENST00000300527 CSMD3Q7Z407 3707 aa9.18□□□□□ -0.94
COL6A2-201ENST00000300527 C16orf90A8MZG2 172 aa9.17□□□□□ -0.94
COL6A2-201ENST00000300527 COA5Q86WW8 74 aa9.17□□□□□ -0.94
COL6A2-201ENST00000300527 SPAG11AQ6PDA7 123 aa9.17□□□□□ -0.94
COL6A2-201ENST00000300527 J3QKU1 62 aa9.16□□□□□ -0.94
COL6A2-201ENST00000300527 KRTAP29-1A8MX34 341 aaPredicted RBP9.15□□□□□ -0.94
COL6A2-201ENST00000300527 LIMD2Q9BT23 127 aa9.15□□□□□ -0.94
COL6A2-201ENST00000300527 IGLV9-49A0A0B4J1Y8 123 aa9.14□□□□□ -0.95
COL6A2-201ENST00000300527 A8MWP4 228 aa9.13□□□□□ -0.95
COL6A2-201ENST00000300527 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
COL6A2-201ENST00000300527 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
COL6A2-201ENST00000300527 COL7A1Q02388 2944 aa9.11□□□□□ -0.95
COL6A2-201ENST00000300527 LCA10Q71F78 164 aa9.1□□□□□ -0.95
COL6A2-201ENST00000300527 SPANXA2-OT1Q8N9U9 137 aa9.08□□□□□ -0.96
COL6A2-201ENST00000300527 KMT2BQ9UMN6 2715 aaPredicted RBP9.08□□□□□ -0.96
COL6A2-201ENST00000300527 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
COL6A2-201ENST00000300527 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
COL6A2-201ENST00000300527 UBE2DNLQ8IWF7 75 aa9.06□□□□□ -0.96
COL6A2-201ENST00000300527 MMP24-AS1A0A0U1RRL7 71 aa9.05□□□□□ -0.96
COL6A2-201ENST00000300527 C9orf163Q8N9P6 203 aa9.05□□□□□ -0.96
COL6A2-201ENST00000300527 H3BPC8 53 aa9.05□□□□□ -0.96
COL6A2-201ENST00000300527 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
COL6A2-201ENST00000300527 CD164Q04900 197 aa9.04□□□□□ -0.96
COL6A2-201ENST00000300527 MGAM2Q2M2H8 2515 aa9.04□□□□□ -0.96
COL6A2-201ENST00000300527 IGLV8-61A0A075B6I0 122 aa9.03□□□□□ -0.96
COL6A2-201ENST00000300527 KTN1-AS1Q86SY8 53 aa9.03□□□□□ -0.96
COL6A2-201ENST00000300527 STAB2Q8WWQ8 2551 aa9.03□□□□□ -0.96
COL6A2-201ENST00000300527 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
COL6A2-201ENST00000300527 ANK2Q01484 3957 aa9.01□□□□□ -0.97
COL6A2-201ENST00000300527 RBM12B-AS1Q9P1G2 102 aa9.01□□□□□ -0.97
COL6A2-201ENST00000300527 LOC101927531A0A1B0GV80 90 aa9.01□□□□□ -0.97
COL6A2-201ENST00000300527 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
COL6A2-201ENST00000300527 IGLV7-46A0A075B6I9 117 aa9□□□□□ -0.97
COL6A2-201ENST00000300527 Q75L30 129 aa9□□□□□ -0.97
COL6A2-201ENST00000300527 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
COL6A2-201ENST00000300527 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
COL6A2-201ENST00000300527 ANAPC11Q9NYG5 84 aa8.99□□□□□ -0.97
COL6A2-201ENST00000300527 SPINK7P58062 85 aa8.97□□□□□ -0.97
COL6A2-201ENST00000300527 DNAH10Q8IVF4 4471 aa8.96□□□□□ -0.97
COL6A2-201ENST00000300527 PRR26Q8N8Z3 221 aa8.95□□□□□ -0.98
COL6A2-201ENST00000300527 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
COL6A2-201ENST00000300527 K7EIL1 84 aa8.94□□□□□ -0.98
COL6A2-201ENST00000300527 PANO1I0J062 215 aa8.94□□□□□ -0.98
COL6A2-201ENST00000300527 CDC42SE1Q9NRR8 79 aa8.93□□□□□ -0.98
COL6A2-201ENST00000300527 HRES1P13985 223 aa8.92□□□□□ -0.98
COL6A2-201ENST00000300527 MOBPQ13875 183 aa8.92□□□□□ -0.98
COL6A2-201ENST00000300527 KRTAP24-1Q3LI83 254 aa8.92□□□□□ -0.98
COL6A2-201ENST00000300527 A0A087X002 238 aa8.91□□□□□ -0.98
COL6A2-201ENST00000300527 NOTCH2NLQ7Z3S9 236 aa8.91□□□□□ -0.98
COL6A2-201ENST00000300527 RETNLBQ9BQ08 111 aa8.9□□□□□ -0.98
COL6A2-201ENST00000300527 A6NN06 94 aa8.89□□□□□ -0.99
COL6A2-201ENST00000300527 SPRR1BP22528 89 aa8.89□□□□□ -0.99
COL6A2-201ENST00000300527 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
COL6A2-201ENST00000300527 LINC01558Q9Y6Z2 57 aa8.88□□□□□ -0.99
COL6A2-201ENST00000300527 A0A1B0GVX0 72 aa8.86□□□□□ -0.99
COL6A2-201ENST00000300527 Q96NJ1 140 aa8.86□□□□□ -0.99
COL6A2-201ENST00000300527 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
COL6A2-201ENST00000300527 C14orf177Q52M58 125 aa8.85□□□□□ -0.99
COL6A2-201ENST00000300527 PRAC1Q96KF2 57 aa8.84□□□□□ -0.99
COL6A2-201ENST00000300527 C7orf65Q6ZTY9 151 aa8.84□□□□□ -0.99
COL6A2-201ENST00000300527 LYSTQ99698 3801 aa8.84□□□□□ -0.99
COL6A2-201ENST00000300527 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.82□□□□□ -1
COL6A2-201ENST00000300527 H3BS24 57 aa8.82□□□□□ -1
COL6A2-201ENST00000300527 Q6ZR54 194 aa8.79□□□□□ -1
COL6A2-201ENST00000300527 Q5W150 140 aa8.79□□□□□ -1
COL6A2-201ENST00000300527 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
COL6A2-201ENST00000300527 MDFIQ99750 246 aa8.78□□□□□ -1
COL6A2-201ENST00000300527 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
COL6A2-201ENST00000300527 DNAH1Q9P2D7 4330 aa8.74□□□□□ -1.01
COL6A2-201ENST00000300527 LINC00313P59037 77 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms