RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 CASC10Q5T4H9 136 aa10.77□□□□□ -0.68
SBSPON-201ENST00000297354 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.68
SBSPON-201ENST00000297354 KTN1-AS1Q86SY8 53 aa10.75□□□□□ -0.69
SBSPON-201ENST00000297354 INAFM1C9JVW0 142 aa10.75□□□□□ -0.69
SBSPON-201ENST00000297354 KRTAP10-3P60369 221 aa10.74□□□□□ -0.69
SBSPON-201ENST00000297354 IGHV6-1A0A0B4J1U7 121 aa10.73□□□□□ -0.69
SBSPON-201ENST00000297354 UBE2DNLQ8IWF7 75 aa10.72□□□□□ -0.69
SBSPON-201ENST00000297354 Q8N9P0 234 aaPredicted RBP10.72□□□□□ -0.69
SBSPON-201ENST00000297354 IGLV1-50A0A075B6I6 118 aa10.72□□□□□ -0.69
SBSPON-201ENST00000297354 RETNLBQ9BQ08 111 aa10.69□□□□□ -0.7
SBSPON-201ENST00000297354 TENM1Q9UKZ4 2725 aa10.68□□□□□ -0.7
SBSPON-201ENST00000297354 CHTF8P0CG12 524 aa10.67□□□□□ -0.7
SBSPON-201ENST00000297354 CYP4F30PQ9H0H9 118 aa10.66□□□□□ -0.7
SBSPON-201ENST00000297354 TENM3Q9P273 2699 aa10.64□□□□□ -0.71
SBSPON-201ENST00000297354 LOC101927531A0A1B0GV80 90 aa10.64□□□□□ -0.71
SBSPON-201ENST00000297354 ATP11AUNQ6ZP68 121 aa10.64□□□□□ -0.71
SBSPON-201ENST00000297354 SRRM2Q9UQ35 2752 aaKnown RBP10.64□□□□□ -0.71
SBSPON-201ENST00000297354 PRAC1Q96KF2 57 aa10.63□□□□□ -0.71
SBSPON-201ENST00000297354 NBPF19A0A087WUL8 3843 aa10.63□□□□□ -0.71
SBSPON-201ENST00000297354 LINC00588Q9Y4M8 146 aa10.63□□□□□ -0.71
SBSPON-201ENST00000297354 ZCCHC13Q8WW36 166 aaKnown RBP10.62□□□□□ -0.71
SBSPON-201ENST00000297354 LCA10Q71F78 164 aa10.62□□□□□ -0.71
SBSPON-201ENST00000297354 PHF5AQ7RTV0 110 aaKnown RBP10.62□□□□□ -0.71
SBSPON-201ENST00000297354 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
SBSPON-201ENST00000297354 SPRR4Q96PI1 79 aa10.61□□□□□ -0.71
SBSPON-201ENST00000297354 J3QKU1 62 aa10.61□□□□□ -0.71
SBSPON-201ENST00000297354 AKAP9Q99996 3911 aa10.61□□□□□ -0.71
SBSPON-201ENST00000297354 ZNF469Q96JG9 3925 aaPredicted RBP10.59□□□□□ -0.71
SBSPON-201ENST00000297354 A0A1B0GW54 56 aa10.59□□□□□ -0.71
SBSPON-201ENST00000297354 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
SBSPON-201ENST00000297354 PRR26Q8N8Z3 221 aa10.59□□□□□ -0.71
SBSPON-201ENST00000297354 FBN1P35555 2871 aaKnown RBP10.58□□□□□ -0.72
SBSPON-201ENST00000297354 A8MWP4 228 aa10.56□□□□□ -0.72
SBSPON-201ENST00000297354 SPINK7P58062 85 aa10.55□□□□□ -0.72
SBSPON-201ENST00000297354 IGLV8-61A0A075B6I0 122 aa10.54□□□□□ -0.72
SBSPON-201ENST00000297354 C7orf65Q6ZTY9 151 aa10.54□□□□□ -0.72
SBSPON-201ENST00000297354 CNBPP62633 177 aaKnown RBP10.54□□□□□ -0.72
SBSPON-201ENST00000297354 KRTAP26-1Q6PEX3 210 aa10.52□□□□□ -0.73
SBSPON-201ENST00000297354 MDFIQ99750 246 aa10.52□□□□□ -0.73
SBSPON-201ENST00000297354 TNP2Q05952 138 aa10.51□□□□□ -0.73
SBSPON-201ENST00000297354 CDC42SE1Q9NRR8 79 aa10.5□□□□□ -0.73
SBSPON-201ENST00000297354 MOBPQ13875 183 aa10.48□□□□□ -0.73
SBSPON-201ENST00000297354 SPANXA2-OT1Q8N9U9 137 aa10.48□□□□□ -0.73
SBSPON-201ENST00000297354 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
SBSPON-201ENST00000297354 H3BPC8 53 aa10.47□□□□□ -0.73
SBSPON-201ENST00000297354 STAB2Q8WWQ8 2551 aa10.47□□□□□ -0.73
SBSPON-201ENST00000297354 Q75L30 129 aa10.47□□□□□ -0.73
SBSPON-201ENST00000297354 TENM4Q6N022 2769 aa10.46□□□□□ -0.74
SBSPON-201ENST00000297354 LCE6AA0A183 80 aa10.45□□□□□ -0.74
SBSPON-201ENST00000297354 KRTAP1-1Q07627 177 aa10.44□□□□□ -0.74
SBSPON-201ENST00000297354 SPINK1P00995 79 aa10.44□□□□□ -0.74
SBSPON-201ENST00000297354 KRTAP4-16G5E9R7 235 aaPredicted RBP10.42□□□□□ -0.74
SBSPON-201ENST00000297354 SPRR1AP35321 89 aa10.41□□□□□ -0.74
SBSPON-201ENST00000297354 TRRAPQ9Y4A5 3859 aa10.41□□□□□ -0.74
SBSPON-201ENST00000297354 DNAH10OSP0CZ25 163 aa10.4□□□□□ -0.74
SBSPON-201ENST00000297354 KRTAP7-1Q8IUC3 87 aa10.4□□□□□ -0.74
SBSPON-201ENST00000297354 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.75
SBSPON-201ENST00000297354 IGLV7-46A0A075B6I9 117 aa10.4□□□□□ -0.75
SBSPON-201ENST00000297354 OTOGQ6ZRI0 2925 aa10.4□□□□□ -0.75
SBSPON-201ENST00000297354 A0A1B0GU69 56 aa10.39□□□□□ -0.75
SBSPON-201ENST00000297354 LINC00313P59037 77 aa10.39□□□□□ -0.75
SBSPON-201ENST00000297354 ADM2Q7Z4H4 148 aa10.39□□□□□ -0.75
SBSPON-201ENST00000297354 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
SBSPON-201ENST00000297354 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
SBSPON-201ENST00000297354 K7EIL1 84 aa10.37□□□□□ -0.75
SBSPON-201ENST00000297354 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
SBSPON-201ENST00000297354 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
SBSPON-201ENST00000297354 C8orf17Q9NRJ1 99 aa10.37□□□□□ -0.75
SBSPON-201ENST00000297354 KRTAP29-1A8MX34 341 aaPredicted RBP10.37□□□□□ -0.75
SBSPON-201ENST00000297354 HRES1P13985 223 aa10.37□□□□□ -0.75
SBSPON-201ENST00000297354 H3BNG1 76 aa10.36□□□□□ -0.75
SBSPON-201ENST00000297354 KRTAP10-11P60412 298 aa10.36□□□□□ -0.75
SBSPON-201ENST00000297354 COL7A1Q02388 2944 aa10.36□□□□□ -0.75
SBSPON-201ENST00000297354 MMP24-AS1A0A0U1RRL7 71 aa10.36□□□□□ -0.75
SBSPON-201ENST00000297354 TP53AIP1Q9HCN2 124 aa10.35□□□□□ -0.75
SBSPON-201ENST00000297354 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
SBSPON-201ENST00000297354 A6NN06 94 aa10.34□□□□□ -0.75
SBSPON-201ENST00000297354 TENM2Q9NT68 2774 aa10.34□□□□□ -0.75
SBSPON-201ENST00000297354 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
SBSPON-201ENST00000297354 C9orf163Q8N9P6 203 aa10.32□□□□□ -0.76
SBSPON-201ENST00000297354 LINC00472Q9H8W2 130 aa10.32□□□□□ -0.76
SBSPON-201ENST00000297354 H3BS24 57 aa10.31□□□□□ -0.76
SBSPON-201ENST00000297354 MRPL34Q9BQ48 92 aaKnown RBP10.31□□□□□ -0.76
SBSPON-201ENST00000297354 LINC01558Q9Y6Z2 57 aa10.3□□□□□ -0.76
SBSPON-201ENST00000297354 KMT2BQ9UMN6 2715 aaPredicted RBP10.3□□□□□ -0.76
SBSPON-201ENST00000297354 C8orf87E5RJ46 101 aa10.29□□□□□ -0.76
SBSPON-201ENST00000297354 IGKV2D-30A0A075B6S6 120 aa10.29□□□□□ -0.76
SBSPON-201ENST00000297354 IGKV2-30P06310 120 aa10.29□□□□□ -0.76
SBSPON-201ENST00000297354 IGLV5-37A0A075B6J1 123 aa10.28□□□□□ -0.76
SBSPON-201ENST00000297354 ACYP2P14621 99 aa10.28□□□□□ -0.76
SBSPON-201ENST00000297354 KRTAP11-1Q8IUC1 163 aa10.26□□□□□ -0.77
SBSPON-201ENST00000297354 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
SBSPON-201ENST00000297354 A0A087X002 238 aa10.22□□□□□ -0.77
SBSPON-201ENST00000297354 NOTCH2NLQ7Z3S9 236 aa10.22□□□□□ -0.77
SBSPON-201ENST00000297354 C14orf177Q52M58 125 aa10.22□□□□□ -0.77
SBSPON-201ENST00000297354 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
SBSPON-201ENST00000297354 MIR22HGQ0VDD5 57 aa10.19□□□□□ -0.78
SBSPON-201ENST00000297354 RTL8CO15255 209 aa10.17□□□□□ -0.78
SBSPON-201ENST00000297354 KRTAP1-5Q9BYS1 174 aa10.16□□□□□ -0.78
SBSPON-201ENST00000297354 CSAG1Q6PB30 78 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms