RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 C1orf195Q5TG92 126 aa11.94□□□□□ -0.5
SHF-201ENST00000290894 Q8N9L7 120 aa11.94□□□□□ -0.5
SHF-201ENST00000290894 A0A1W2PNM2 257 aa11.93□□□□□ -0.5
SHF-201ENST00000290894 TNP2Q05952 138 aa11.93□□□□□ -0.5
SHF-201ENST00000290894 CXCL6P80162 114 aa11.92□□□□□ -0.5
SHF-201ENST00000290894 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.92□□□□□ -0.5
SHF-201ENST00000290894 SMIM29Q86T20 159 aa11.91□□□□□ -0.5
SHF-201ENST00000290894 A0A087WTM6 91 aa11.9□□□□□ -0.5
SHF-201ENST00000290894 NREPQ16612 68 aa11.9□□□□□ -0.5
SHF-201ENST00000290894 EPM2AB3EWF7 344 aa11.9□□□□□ -0.5
SHF-201ENST00000290894 FAM236DA0A1B0GTK5 79 aa11.87□□□□□ -0.51
SHF-201ENST00000290894 FAM236CP0DP71 79 aa11.87□□□□□ -0.51
SHF-201ENST00000290894 LINC00476Q8WZB0 136 aa11.86□□□□□ -0.51
SHF-201ENST00000290894 LY6G6CO95867 125 aa11.85□□□□□ -0.51
SHF-201ENST00000290894 UBE2AP49459 152 aa11.85□□□□□ -0.51
SHF-201ENST00000290894 Q6ZR54 194 aa11.84□□□□□ -0.51
SHF-201ENST00000290894 Q8NBF4 154 aa11.84□□□□□ -0.51
SHF-201ENST00000290894 LINC00474Q9P2X8 69 aa11.84□□□□□ -0.51
SHF-201ENST00000290894 F8WEM9 126 aa11.84□□□□□ -0.51
SHF-201ENST00000290894 FRAS1Q86XX4 4008 aa11.83□□□□□ -0.52
SHF-201ENST00000290894 BPY2O14599 106 aa11.83□□□□□ -0.52
SHF-201ENST00000290894 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
SHF-201ENST00000290894 RTL8CO15255 209 aa11.82□□□□□ -0.52
SHF-201ENST00000290894 SPACA4Q8TDM5 124 aa11.82□□□□□ -0.52
SHF-201ENST00000290894 IGFL1Q6UW32 110 aa11.81□□□□□ -0.52
SHF-201ENST00000290894 TRAV7A0A075B6U4 112 aa11.8□□□□□ -0.52
SHF-201ENST00000290894 BCE1O60756 84 aa11.8□□□□□ -0.52
SHF-201ENST00000290894 SERP1Q9Y6X1 66 aa11.78□□□□□ -0.52
SHF-201ENST00000290894 DNAH6Q9C0G6 4158 aa11.77□□□□□ -0.52
SHF-201ENST00000290894 IGKV4-1P06312 121 aa11.77□□□□□ -0.53
SHF-201ENST00000290894 C1orf134Q5TEV5 83 aa11.77□□□□□ -0.53
SHF-201ENST00000290894 SPRR4Q96PI1 79 aa11.77□□□□□ -0.53
SHF-201ENST00000290894 DNAH17Q9UFH2 4485 aa11.76□□□□□ -0.53
SHF-201ENST00000290894 DEFB116Q30KQ4 102 aa11.75□□□□□ -0.53
SHF-201ENST00000290894 H0Y9J4 135 aa11.74□□□□□ -0.53
SHF-201ENST00000290894 IGLV5-52A0A0A0MRZ9 124 aa11.73□□□□□ -0.53
SHF-201ENST00000290894 DNAH8Q96JB1 4490 aa11.72□□□□□ -0.53
SHF-201ENST00000290894 SMIM26A0A096LP01 95 aa11.72□□□□□ -0.53
SHF-201ENST00000290894 A0A087WSZ3 146 aa11.71□□□□□ -0.53
SHF-201ENST00000290894 KRTAP13-1Q8IUC0 172 aa11.7□□□□□ -0.54
SHF-201ENST00000290894 SNURFQ9Y675 71 aa11.69□□□□□ -0.54
SHF-201ENST00000290894 HYDINQ4G0P3 5121 aa11.68□□□□□ -0.54
SHF-201ENST00000290894 A0A1B0GW54 56 aa11.67□□□□□ -0.54
SHF-201ENST00000290894 PSORS1C2Q9UIG4 136 aa11.67□□□□□ -0.54
SHF-201ENST00000290894 IGLV8-61A0A075B6I0 122 aa11.67□□□□□ -0.54
SHF-201ENST00000290894 KLKP1Q107X0 134 aa11.66□□□□□ -0.54
SHF-201ENST00000290894 DSCR10P59022 87 aa11.66□□□□□ -0.54
SHF-201ENST00000290894 H7BZZ5 65 aa11.65□□□□□ -0.54
SHF-201ENST00000290894 K7EQZ3 153 aa11.65□□□□□ -0.54
SHF-201ENST00000290894 SPRR1BP22528 89 aa11.65□□□□□ -0.54
SHF-201ENST00000290894 BRK1Q8WUW1 75 aa11.64□□□□□ -0.55
SHF-201ENST00000290894 IGLV9-49A0A0B4J1Y8 123 aa11.64□□□□□ -0.55
SHF-201ENST00000290894 A0A0U1RQV1 116 aa11.64□□□□□ -0.55
SHF-201ENST00000290894 DNAH5Q8TE73 4624 aa11.62□□□□□ -0.55
SHF-201ENST00000290894 KRTAP10-2P60368 255 aa11.62□□□□□ -0.55
SHF-201ENST00000290894 PMAIP1Q13794 54 aa11.62□□□□□ -0.55
SHF-201ENST00000290894 ANAPC11Q9NYG5 84 aa11.62□□□□□ -0.55
SHF-201ENST00000290894 DNAH11Q96DT5 4516 aa11.62□□□□□ -0.55
SHF-201ENST00000290894 PLAC8Q9NZF1 115 aa11.61□□□□□ -0.55
SHF-201ENST00000290894 WWC2-AS2Q96NR7 200 aa11.6□□□□□ -0.55
SHF-201ENST00000290894 CD164Q04900 197 aa11.6□□□□□ -0.55
SHF-201ENST00000290894 RPL37AP61513 92 aaKnown RBP11.59□□□□□ -0.55
SHF-201ENST00000290894 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
SHF-201ENST00000290894 OCR1Q9BZK8 76 aa11.57□□□□□ -0.56
SHF-201ENST00000290894 FAM30AQ9NZY2 134 aa11.57□□□□□ -0.56
SHF-201ENST00000290894 TMEM254Q8TBM7 123 aa11.56□□□□□ -0.56
SHF-201ENST00000290894 ZNF861PO60384 105 aa11.51□□□□□ -0.57
SHF-201ENST00000290894 FAT2Q9NYQ8 4349 aa11.51□□□□□ -0.57
SHF-201ENST00000290894 NDUFC1O43677 76 aa11.51□□□□□ -0.57
SHF-201ENST00000290894 PKD1P98161 4303 aa11.5□□□□□ -0.57
SHF-201ENST00000290894 CIRBP-AS1Q8TBR5 109 aa11.5□□□□□ -0.57
SHF-201ENST00000290894 ALMS1Q8TCU4 4167 aa11.5□□□□□ -0.57
SHF-201ENST00000290894 WFDC13Q8IUB5 93 aa11.5□□□□□ -0.57
SHF-201ENST00000290894 MOBPQ13875 183 aa11.49□□□□□ -0.57
SHF-201ENST00000290894 PRR15Q8IV56 129 aa11.48□□□□□ -0.57
SHF-201ENST00000290894 HCG22E2RYF7 251 aa11.47□□□□□ -0.57
SHF-201ENST00000290894 LINC00483Q53H64 154 aa11.47□□□□□ -0.57
SHF-201ENST00000290894 ATP5EP56381 51 aaPredicted RBP11.46□□□□□ -0.57
SHF-201ENST00000290894 KRTAP21-3Q3LHN1 58 aa11.46□□□□□ -0.58
SHF-201ENST00000290894 LINC00472Q9H8W2 130 aa11.46□□□□□ -0.58
SHF-201ENST00000290894 C4orf48Q5BLP8 95 aa11.45□□□□□ -0.58
SHF-201ENST00000290894 ZNF706Q9Y5V0 76 aaPredicted RBP11.45□□□□□ -0.58
SHF-201ENST00000290894 IGLV7-43P04211 117 aa11.44□□□□□ -0.58
SHF-201ENST00000290894 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
SHF-201ENST00000290894 KRTAP10-1P60331 282 aa11.43□□□□□ -0.58
SHF-201ENST00000290894 PKHD1P08F94 4074 aa11.41□□□□□ -0.58
SHF-201ENST00000290894 A8MWP4 228 aa11.37□□□□□ -0.59
SHF-201ENST00000290894 Q96NJ1 140 aa11.35□□□□□ -0.59
SHF-201ENST00000290894 SACSQ9NZJ4 4579 aa11.34□□□□□ -0.59
SHF-201ENST00000290894 LCE6AA0A183 80 aa11.34□□□□□ -0.59
SHF-201ENST00000290894 VPS13BQ7Z7G8 4022 aa11.33□□□□□ -0.6
SHF-201ENST00000290894 CASC2Q6XLA1 102 aa11.33□□□□□ -0.6
SHF-201ENST00000290894 KRTAP29-1A8MX34 341 aaPredicted RBP11.32□□□□□ -0.6
SHF-201ENST00000290894 Q6ZSA8 131 aa11.31□□□□□ -0.6
SHF-201ENST00000290894 NDUFB1O75438 58 aa11.26□□□□□ -0.61
SHF-201ENST00000290894 MMP24-AS1A0A0U1RRL7 71 aa11.25□□□□□ -0.61
SHF-201ENST00000290894 SPINK6Q6UWN8 80 aa11.25□□□□□ -0.61
SHF-201ENST00000290894 A0A087X002 238 aa11.25□□□□□ -0.61
SHF-201ENST00000290894 IGHV6-1A0A0B4J1U7 121 aa11.25□□□□□ -0.61
SHF-201ENST00000290894 ZCCHC13Q8WW36 166 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms