RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 LIMD2Q9BT23 127 aa14.17□□□□□ -0.14
PDF-201ENST00000288022 UQCR10Q9UDW1 63 aa14.17□□□□□ -0.14
PDF-201ENST00000288022 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.16□□□□□ -0.14
PDF-201ENST00000288022 CD164Q04900 197 aa14.14□□□□□ -0.15
PDF-201ENST00000288022 RNF213Q63HN8 5207 aa14.13□□□□□ -0.15
PDF-201ENST00000288022 H0YGX0 51 aa14.13□□□□□ -0.15
PDF-201ENST00000288022 SNCGO76070 127 aa14.13□□□□□ -0.15
PDF-201ENST00000288022 A0A0G2JQZ4 141 aa14.12□□□□□ -0.15
PDF-201ENST00000288022 KRTAP13-3Q3SY46 172 aa14.08□□□□□ -0.16
PDF-201ENST00000288022 PPDPFLQ8WWR9 84 aa14.07□□□□□ -0.16
PDF-201ENST00000288022 FAM218AQ96MZ4 157 aa14.06□□□□□ -0.16
PDF-201ENST00000288022 SNHG12Q9BXW3 62 aa14.06□□□□□ -0.16
PDF-201ENST00000288022 K7ERJ3 54 aa14.05□□□□□ -0.16
PDF-201ENST00000288022 TRIAP1O43715 76 aa14.03□□□□□ -0.16
PDF-201ENST00000288022 OCIAD2Q56VL3 154 aa14.02□□□□□ -0.17
PDF-201ENST00000288022 Q6JHZ5 121 aa14.02□□□□□ -0.17
PDF-201ENST00000288022 PSMB2P49721 201 aa14.01□□□□□ -0.17
PDF-201ENST00000288022 IGLV8-61A0A075B6I0 122 aa13.99□□□□□ -0.17
PDF-201ENST00000288022 A0A1B0GX51 115 aa13.98□□□□□ -0.17
PDF-201ENST00000288022 Q5XG85 94 aa13.98□□□□□ -0.17
PDF-201ENST00000288022 CLEC2BQ92478 149 aa13.98□□□□□ -0.17
PDF-201ENST00000288022 IGFL1Q6UW32 110 aa13.97□□□□□ -0.17
PDF-201ENST00000288022 H3BUT2 72 aa13.95□□□□□ -0.18
PDF-201ENST00000288022 TCL1BO95988 128 aa13.94□□□□□ -0.18
PDF-201ENST00000288022 SMIM6P0DI80 62 aa13.94□□□□□ -0.18
PDF-201ENST00000288022 GHRHP01286 108 aa13.93□□□□□ -0.18
PDF-201ENST00000288022 COX6CP09669 75 aa13.93□□□□□ -0.18
PDF-201ENST00000288022 FABP2P12104 132 aa13.91□□□□□ -0.18
PDF-201ENST00000288022 NDUFV3P56181 108 aaKnown RBP13.91□□□□□ -0.18
PDF-201ENST00000288022 C1orf195Q5TG92 126 aa13.91□□□□□ -0.18
PDF-201ENST00000288022 DNAL4O96015 105 aa13.9□□□□□ -0.18
PDF-201ENST00000288022 TRBV7-7A0A0K0K1E9 115 aa13.89□□□□□ -0.19
PDF-201ENST00000288022 C9orf92A6NGG3 77 aa13.85□□□□□ -0.19
PDF-201ENST00000288022 XP32Q5T750 250 aa13.84□□□□□ -0.19
PDF-201ENST00000288022 H3BMG7 143 aa13.83□□□□□ -0.2
PDF-201ENST00000288022 M0R143 59 aa13.83□□□□□ -0.2
PDF-201ENST00000288022 ORMDL1Q9P0S3 153 aa13.83□□□□□ -0.2
PDF-201ENST00000288022 SCGB1C2P0DMR2 95 aa13.82□□□□□ -0.2
PDF-201ENST00000288022 SEC61BP60468 96 aaKnown RBP13.82□□□□□ -0.2
PDF-201ENST00000288022 ASB16-AS1Q495Z4 193 aa13.82□□□□□ -0.2
PDF-201ENST00000288022 MUC17Q685J3 4493 aa13.81□□□□□ -0.2
PDF-201ENST00000288022 A0A0U1RQV1 116 aa13.79□□□□□ -0.2
PDF-201ENST00000288022 H3BQ85 93 aa13.78□□□□□ -0.2
PDF-201ENST00000288022 MUC2Q02817 5179 aa13.78□□□□□ -0.2
PDF-201ENST00000288022 LOC105371267A0A1B0GV96 52 aa13.76□□□□□ -0.21
PDF-201ENST00000288022 TSTD3H0UI37 97 aa13.76□□□□□ -0.21
PDF-201ENST00000288022 Q6Q795 121 aa13.75□□□□□ -0.21
PDF-201ENST00000288022 TEN1Q86WV5 123 aa13.75□□□□□ -0.21
PDF-201ENST00000288022 A0A1B0GV72 72 aa13.74□□□□□ -0.21
PDF-201ENST00000288022 TMEM256-PLSCR3K7ERE1 68 aa13.74□□□□□ -0.21
PDF-201ENST00000288022 TRACP01848 142 aa13.72□□□□□ -0.21
PDF-201ENST00000288022 SS18L2Q9UHA2 77 aa13.72□□□□□ -0.21
PDF-201ENST00000288022 LST1O00453 97 aa13.71□□□□□ -0.21
PDF-201ENST00000288022 ANKRD29Q8N6D5 301 aa13.68□□□□□ -0.22
PDF-201ENST00000288022 A0A087WSZ3 146 aa13.67□□□□□ -0.22
PDF-201ENST00000288022 NAA38Q9BRA0 125 aaKnown RBP13.67□□□□□ -0.22
PDF-201ENST00000288022 UBE2V1Q13404 147 aa13.65□□□□□ -0.22
PDF-201ENST00000288022 A0A1W2PNM2 257 aa13.64□□□□□ -0.23
PDF-201ENST00000288022 BATFQ16520 125 aa13.64□□□□□ -0.23
PDF-201ENST00000288022 PCOTHQ58A44 107 aa13.6□□□□□ -0.23
PDF-201ENST00000288022 KRTAP4-1Q9BYQ7 146 aa13.6□□□□□ -0.23
PDF-201ENST00000288022 ATXN8Q156A1 80 aa13.59□□□□□ -0.23
PDF-201ENST00000288022 BAALC-AS2P0C853 105 aa13.58□□□□□ -0.24
PDF-201ENST00000288022 TRBV7-4A0A0J9YYF1 115 aa13.57□□□□□ -0.24
PDF-201ENST00000288022 CCKP06307 115 aa13.55□□□□□ -0.24
PDF-201ENST00000288022 RBM3P98179 157 aaKnown RBP13.54□□□□□ -0.24
PDF-201ENST00000288022 OBSCN-AS1Q96MR7 158 aa13.54□□□□□ -0.24
PDF-201ENST00000288022 RPL37P61927 97 aaKnown RBP13.53□□□□□ -0.24
PDF-201ENST00000288022 LYRM7Q5U5X0 104 aa13.52□□□□□ -0.25
PDF-201ENST00000288022 Q96NJ1 140 aa13.51□□□□□ -0.25
PDF-201ENST00000288022 DSCR8Q96T75 97 aa13.51□□□□□ -0.25
PDF-201ENST00000288022 VPS25Q9BRG1 176 aa13.51□□□□□ -0.25
PDF-201ENST00000288022 SIGMAR1Q99720 223 aa13.47□□□□□ -0.25
PDF-201ENST00000288022 TRBV20-1A0A075B6N2 111 aa13.44□□□□□ -0.26
PDF-201ENST00000288022 FAT4Q6V0I7 4981 aa13.43□□□□□ -0.26
PDF-201ENST00000288022 C9JAW5 83 aa13.43□□□□□ -0.26
PDF-201ENST00000288022 IGKV4-1P06312 121 aa13.42□□□□□ -0.26
PDF-201ENST00000288022 C9orf118A6NHY6 69 aa13.4□□□□□ -0.26
PDF-201ENST00000288022 JMJD7-PLA2G4BH0Y9G9 81 aa13.39□□□□□ -0.27
PDF-201ENST00000288022 TAX1BP3O14907 124 aa13.38□□□□□ -0.27
PDF-201ENST00000288022 DEFB116Q30KQ4 102 aa13.38□□□□□ -0.27
PDF-201ENST00000288022 LCE2AQ5TA79 106 aaPredicted RBP13.38□□□□□ -0.27
PDF-201ENST00000288022 Q75L30 129 aa13.37□□□□□ -0.27
PDF-201ENST00000288022 DSCR10P59022 87 aa13.36□□□□□ -0.27
PDF-201ENST00000288022 LINC00472Q9H8W2 130 aa13.36□□□□□ -0.27
PDF-201ENST00000288022 ATP11AUNQ6ZP68 121 aa13.35□□□□□ -0.27
PDF-201ENST00000288022 A0A1W2PPM0 123 aa13.34□□□□□ -0.27
PDF-201ENST00000288022 C21orf62-AS1Q17RA5 79 aa13.32□□□□□ -0.28
PDF-201ENST00000288022 LOC110117498A0A087WWA1 95 aa13.3□□□□□ -0.28
PDF-201ENST00000288022 Q6ZQT0 140 aa13.3□□□□□ -0.28
PDF-201ENST00000288022 LINC00313P59037 77 aa13.29□□□□□ -0.28
PDF-201ENST00000288022 C14orf132Q9NPU4 83 aa13.29□□□□□ -0.28
PDF-201ENST00000288022 PDE6GP18545 87 aa13.28□□□□□ -0.28
PDF-201ENST00000288022 C20orf166-AS1Q96NR2 134 aa13.28□□□□□ -0.28
PDF-201ENST00000288022 IGHV6-1A0A0B4J1U7 121 aa13.25□□□□□ -0.29
PDF-201ENST00000288022 A8MUU9 505 aa13.25□□□□□ -0.29
PDF-201ENST00000288022 MTURNQ8N3F0 131 aa13.24□□□□□ -0.29
PDF-201ENST00000288022 H3BT86 120 aa13.23□□□□□ -0.29
PDF-201ENST00000288022 A0A1B0GW54 56 aa13.2□□□□□ -0.3
PDF-201ENST00000288022 J3KT08 172 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms