RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 HAMPP81172 84 aa1.47□□□□□ -2.17
CHD1-201ENST00000284049 SPACA4Q8TDM5 124 aa1.47□□□□□ -2.17
CHD1-201ENST00000284049 NMES1Q9C002 83 aa1.47□□□□□ -2.17
CHD1-201ENST00000284049 Q5VV11 94 aa1.47□□□□□ -2.17
CHD1-201ENST00000284049 FXYD6Q9H0Q3 95 aa1.46□□□□□ -2.18
CHD1-201ENST00000284049 DYNC2H1Q8NCM8 4307 aaKnown RBP1.46□□□□□ -2.18
CHD1-201ENST00000284049 SPENQ96T58 3664 aaKnown RBP1.46□□□□□ -2.18
CHD1-201ENST00000284049 MEGF8Q7Z7M0 2845 aa1.46□□□□□ -2.18
CHD1-201ENST00000284049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.46□□□□□ -2.18
CHD1-201ENST00000284049 SERF2P84101 59 aa1.46□□□□□ -2.18
CHD1-201ENST00000284049 COL6A5A8TX70 2615 aa1.46□□□□□ -2.18
CHD1-201ENST00000284049 PRCDQ00LT1 54 aa1.46□□□□□ -2.18
CHD1-201ENST00000284049 STAB2Q8WWQ8 2551 aa1.46□□□□□ -2.18
CHD1-201ENST00000284049 CCL18P55774 89 aa1.46□□□□□ -2.18
CHD1-201ENST00000284049 TLN2Q9Y4G6 2542 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 CSPG4Q6UVK1 2322 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 F8WEM9 126 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 LINC00846Q9NV44 126 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 ACANP16112 2415 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 CNFNQ9BYD5 112 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 M0R2N4 97 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 C5orf56Q8N8D9 126 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 CRYBG3Q68DQ2 2970 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 PKD1L1Q8TDX9 2849 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 USMG5Q96IX5 58 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 A0A1B0GUT8 65 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 KRTAP4-12Q9BQ66 201 aa1.45□□□□□ -2.18
CHD1-201ENST00000284049 CELSR1Q9NYQ6 3014 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 INE1O15225 51 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 COX6B1P14854 86 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 ATXN8Q156A1 80 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 SPINK13Q1W4C9 94 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 C10orf113Q5VZT2 155 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 A0A087WVE0 104 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 I3L2K1 104 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 KRTAP10-9P60411 292 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 ARHGAP5-AS1Q96IT6 56 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 FXYD6-FXYD2A0A087WZ82 144 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 CLPSL1A2RUU4 121 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 DNAH6Q9C0G6 4158 aa1.44□□□□□ -2.18
CHD1-201ENST00000284049 MGAM2Q2M2H8 2515 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 LOC110117498A0A087WWA1 95 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 TRGV1A0A0A0MS02 117 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 H3BVH4 76 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 LINC01558Q9Y6Z2 57 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 K7EIM0 57 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 DEFB114Q30KQ6 69 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 SMG1Q96Q15 3661 aaKnown RBP1.43□□□□□ -2.18
CHD1-201ENST00000284049 DNAH17Q9UFH2 4485 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 LINC01546A6NGU7 62 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 ARMS2P0C7Q2 107 aa1.43□□□□□ -2.18
CHD1-201ENST00000284049 RPS27P42677 84 aaKnown RBP1.43□□□□□ -2.18
CHD1-201ENST00000284049 NBDYA0A0U1RRE5 68 aa1.42□□□□□ -2.18
CHD1-201ENST00000284049 FBN1P35555 2871 aaKnown RBP1.42□□□□□ -2.18
CHD1-201ENST00000284049 UBL5Q9BZL1 73 aa1.42□□□□□ -2.18
CHD1-201ENST00000284049 H3BNG1 76 aa1.42□□□□□ -2.18
CHD1-201ENST00000284049 PIGYQ3MUY2 71 aa1.42□□□□□ -2.18
CHD1-201ENST00000284049 NDUFA4O00483 81 aa1.42□□□□□ -2.18
CHD1-201ENST00000284049 WT1-ASQ06250 92 aa1.42□□□□□ -2.18
CHD1-201ENST00000284049 LCE1AQ5T7P2 110 aa1.42□□□□□ -2.18
CHD1-201ENST00000284049 CELSR3Q9NYQ7 3312 aa1.42□□□□□ -2.18
CHD1-201ENST00000284049 NBPF19A0A087WUL8 3843 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 SMIM11BQ8TCY0 68 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 UBE2DNLQ8IWF7 75 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 ASPMQ8IZT6 3477 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 KRTAP4-8Q9BYQ9 185 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 RYR2Q92736 4967 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 LINC01549A6NIU2 74 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 DEFB112Q30KQ8 113 aa1.41□□□□□ -2.18
CHD1-201ENST00000284049 TRBV7-4A0A0J9YYF1 115 aa1.4□□□□□ -2.18
CHD1-201ENST00000284049 PLECQ15149 4684 aaKnown RBP1.4□□□□□ -2.18
CHD1-201ENST00000284049 Q6ZRN7 208 aaPredicted RBP1.4□□□□□ -2.18
CHD1-201ENST00000284049 SSBP3-AS1Q7Z2R9 100 aa1.4□□□□□ -2.18
CHD1-201ENST00000284049 TOMM5Q8N4H5 51 aa1.4□□□□□ -2.18
CHD1-201ENST00000284049 CSMD1Q96PZ7 3565 aa1.4□□□□□ -2.19
CHD1-201ENST00000284049 LINC00575Q6W349 94 aa1.4□□□□□ -2.19
CHD1-201ENST00000284049 KRTAP9-2Q9BYQ4 174 aa1.4□□□□□ -2.19
CHD1-201ENST00000284049 DNAH1Q9P2D7 4330 aa1.4□□□□□ -2.19
CHD1-201ENST00000284049 SPRR4Q96PI1 79 aa1.4□□□□□ -2.19
CHD1-201ENST00000284049 HILPDAQ9Y5L2 63 aa1.4□□□□□ -2.19
CHD1-201ENST00000284049 CYSTM1Q9H1C7 97 aa1.4□□□□□ -2.19
CHD1-201ENST00000284049 TENM3Q9P273 2699 aa1.39□□□□□ -2.19
CHD1-201ENST00000284049 ZNF469Q96JG9 3925 aaPredicted RBP1.39□□□□□ -2.19
CHD1-201ENST00000284049 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
CHD1-201ENST00000284049 TMEM263Q8WUH6 116 aaKnown RBP1.39□□□□□ -2.19
CHD1-201ENST00000284049 ALMS1Q8TCU4 4167 aa1.39□□□□□ -2.19
CHD1-201ENST00000284049 PRB1P04280 392 aa1.39□□□□□ -2.19
CHD1-201ENST00000284049 H0Y9P7 68 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 ANGP03950 147 aaKnown RBP1.38□□□□□ -2.19
CHD1-201ENST00000284049 LCE1DQ5T752 114 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 SPATA8Q6RVD6 105 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 VPS13DQ5THJ4 4388 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 COL7A1Q02388 2944 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 K7EMI3 77 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 Q6ZRX8 168 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 DNAH7Q8WXX0 4024 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 FCER1GP30273 86 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 NOTCH1P46531 2555 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 DNAH9Q9NYC9 4486 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms