RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 EPM2AB3EWF7 344 aa14.34□□□□□ -0.11
RAB40B-201ENST00000269347 SCXQ7RTU7 201 aa14.33□□□□□ -0.11
RAB40B-201ENST00000269347 DPH3Q96FX2 82 aa14.33□□□□□ -0.11
RAB40B-201ENST00000269347 PKD1P98161 4303 aa14.33□□□□□ -0.12
RAB40B-201ENST00000269347 C3orf84H3BNL1 204 aa14.33□□□□□ -0.12
RAB40B-201ENST00000269347 C1orf134Q5TEV5 83 aa14.32□□□□□ -0.12
RAB40B-201ENST00000269347 LINC00476Q8WZB0 136 aa14.32□□□□□ -0.12
RAB40B-201ENST00000269347 C1orf137Q5JT78 98 aa14.29□□□□□ -0.12
RAB40B-201ENST00000269347 LINC00474Q9P2X8 69 aa14.29□□□□□ -0.12
RAB40B-201ENST00000269347 CYSTM1Q9H1C7 97 aa14.29□□□□□ -0.12
RAB40B-201ENST00000269347 BCE1O60756 84 aa14.27□□□□□ -0.13
RAB40B-201ENST00000269347 NREPQ16612 68 aa14.27□□□□□ -0.13
RAB40B-201ENST00000269347 KRTAP13-1Q8IUC0 172 aa14.26□□□□□ -0.13
RAB40B-201ENST00000269347 WWC2-AS2Q96NR7 200 aa14.26□□□□□ -0.13
RAB40B-201ENST00000269347 SMIM20Q8N5G0 67 aa14.25□□□□□ -0.13
RAB40B-201ENST00000269347 SACSQ9NZJ4 4579 aa14.24□□□□□ -0.13
RAB40B-201ENST00000269347 H0Y9J4 135 aa14.22□□□□□ -0.13
RAB40B-201ENST00000269347 TRAV7A0A075B6U4 112 aa14.21□□□□□ -0.13
RAB40B-201ENST00000269347 IGLV5-52A0A0A0MRZ9 124 aa14.21□□□□□ -0.13
RAB40B-201ENST00000269347 UBE2AP49459 152 aa14.21□□□□□ -0.13
RAB40B-201ENST00000269347 KRTAP10-2P60368 255 aa14.21□□□□□ -0.13
RAB40B-201ENST00000269347 PKIGQ9Y2B9 76 aa14.21□□□□□ -0.13
RAB40B-201ENST00000269347 IGFL1Q6UW32 110 aa14.2□□□□□ -0.14
RAB40B-201ENST00000269347 Q8N9L7 120 aa14.2□□□□□ -0.14
RAB40B-201ENST00000269347 Q8NBF4 154 aa14.2□□□□□ -0.14
RAB40B-201ENST00000269347 A0A1B0GW54 56 aa14.18□□□□□ -0.14
RAB40B-201ENST00000269347 BPY2O14599 106 aa14.17□□□□□ -0.14
RAB40B-201ENST00000269347 TMEM258P61165 79 aa14.16□□□□□ -0.14
RAB40B-201ENST00000269347 SPRR4Q96PI1 79 aa14.16□□□□□ -0.14
RAB40B-201ENST00000269347 C20orf197Q8N268 126 aa14.16□□□□□ -0.14
RAB40B-201ENST00000269347 PLAC8Q9NZF1 115 aa14.16□□□□□ -0.14
RAB40B-201ENST00000269347 PSORS1C2Q9UIG4 136 aa14.15□□□□□ -0.15
RAB40B-201ENST00000269347 LRP1BQ9NZR2 4599 aa14.14□□□□□ -0.15
RAB40B-201ENST00000269347 IGKV4-1P06312 121 aa14.14□□□□□ -0.15
RAB40B-201ENST00000269347 FAM30AQ9NZY2 134 aa14.14□□□□□ -0.15
RAB40B-201ENST00000269347 SPRR1BP22528 89 aa14.13□□□□□ -0.15
RAB40B-201ENST00000269347 IGLV8-61A0A075B6I0 122 aa14.12□□□□□ -0.15
RAB40B-201ENST00000269347 F8WEM9 126 aa14.11□□□□□ -0.15
RAB40B-201ENST00000269347 PKHD1P08F94 4074 aa14.06□□□□□ -0.16
RAB40B-201ENST00000269347 J3KT08 172 aa14.04□□□□□ -0.16
RAB40B-201ENST00000269347 ANAPC11Q9NYG5 84 aa14.02□□□□□ -0.16
RAB40B-201ENST00000269347 KLKP1Q107X0 134 aa14.01□□□□□ -0.17
RAB40B-201ENST00000269347 DEFB116Q30KQ4 102 aa14.01□□□□□ -0.17
RAB40B-201ENST00000269347 A0A087WSZ3 146 aa14□□□□□ -0.17
RAB40B-201ENST00000269347 CIRBP-AS1Q8TBR5 109 aa14□□□□□ -0.17
RAB40B-201ENST00000269347 DSCR10P59022 87 aa13.99□□□□□ -0.17
RAB40B-201ENST00000269347 KRTAP10-1P60331 282 aa13.99□□□□□ -0.17
RAB40B-201ENST00000269347 SNURFQ9Y675 71 aa13.99□□□□□ -0.17
RAB40B-201ENST00000269347 RPS28P62857 69 aaKnown RBP13.99□□□□□ -0.17
RAB40B-201ENST00000269347 H7BZZ5 65 aa13.96□□□□□ -0.18
RAB40B-201ENST00000269347 IGLV9-49A0A0B4J1Y8 123 aa13.95□□□□□ -0.18
RAB40B-201ENST00000269347 VPS13BQ7Z7G8 4022 aa13.94□□□□□ -0.18
RAB40B-201ENST00000269347 ZNF861PO60384 105 aa13.94□□□□□ -0.18
RAB40B-201ENST00000269347 LINC00483Q53H64 154 aa13.93□□□□□ -0.18
RAB40B-201ENST00000269347 OCR1Q9BZK8 76 aa13.93□□□□□ -0.18
RAB40B-201ENST00000269347 K7EQZ3 153 aa13.92□□□□□ -0.18
RAB40B-201ENST00000269347 FAM236DA0A1B0GTK5 79 aa13.91□□□□□ -0.18
RAB40B-201ENST00000269347 FAM236CP0DP71 79 aa13.91□□□□□ -0.18
RAB40B-201ENST00000269347 Q6ZSA8 131 aa13.89□□□□□ -0.19
RAB40B-201ENST00000269347 TMEM254Q8TBM7 123 aa13.89□□□□□ -0.19
RAB40B-201ENST00000269347 IGLV7-43P04211 117 aa13.88□□□□□ -0.19
RAB40B-201ENST00000269347 RPL37AP61513 92 aaKnown RBP13.88□□□□□ -0.19
RAB40B-201ENST00000269347 KMT2CQ8NEZ4 4911 aaKnown RBP13.86□□□□□ -0.19
RAB40B-201ENST00000269347 NDUFC1O43677 76 aa13.86□□□□□ -0.19
RAB40B-201ENST00000269347 DYNC1H1Q14204 4646 aaKnown RBP13.85□□□□□ -0.19
RAB40B-201ENST00000269347 RYR2Q92736 4967 aa13.85□□□□□ -0.19
RAB40B-201ENST00000269347 HRCT1Q6UXD1 115 aa13.83□□□□□ -0.2
RAB40B-201ENST00000269347 OXTP01178 125 aa13.82□□□□□ -0.2
RAB40B-201ENST00000269347 MOBPQ13875 183 aa13.81□□□□□ -0.2
RAB40B-201ENST00000269347 LINC00472Q9H8W2 130 aa13.8□□□□□ -0.2
RAB40B-201ENST00000269347 A0A0U1RQV1 116 aa13.79□□□□□ -0.2
RAB40B-201ENST00000269347 HCG22E2RYF7 251 aa13.78□□□□□ -0.2
RAB40B-201ENST00000269347 ZNF706Q9Y5V0 76 aaPredicted RBP13.77□□□□□ -0.21
RAB40B-201ENST00000269347 Q96NJ1 140 aa13.74□□□□□ -0.21
RAB40B-201ENST00000269347 SERP1Q9Y6X1 66 aa13.73□□□□□ -0.21
RAB40B-201ENST00000269347 LCE6AA0A183 80 aa13.69□□□□□ -0.22
RAB40B-201ENST00000269347 ATP5EP56381 51 aaPredicted RBP13.69□□□□□ -0.22
RAB40B-201ENST00000269347 APOBP04114 4563 aaKnown RBP13.68□□□□□ -0.22
RAB40B-201ENST00000269347 WFDC13Q8IUB5 93 aa13.67□□□□□ -0.22
RAB40B-201ENST00000269347 FAT1Q14517 4588 aa13.65□□□□□ -0.22
RAB40B-201ENST00000269347 A0A087X002 238 aa13.65□□□□□ -0.22
RAB40B-201ENST00000269347 PRR15Q8IV56 129 aa13.63□□□□□ -0.23
RAB40B-201ENST00000269347 A8MWP4 228 aa13.62□□□□□ -0.23
RAB40B-201ENST00000269347 KRTAP29-1A8MX34 341 aaPredicted RBP13.61□□□□□ -0.23
RAB40B-201ENST00000269347 C5orf47Q569G3 176 aa13.61□□□□□ -0.23
RAB40B-201ENST00000269347 KRTAP13-2Q52LG2 175 aa13.6□□□□□ -0.23
RAB40B-201ENST00000269347 SVIPQ8NHG7 77 aa13.59□□□□□ -0.23
RAB40B-201ENST00000269347 A0A1B0GVY2 172 aa13.58□□□□□ -0.24
RAB40B-201ENST00000269347 KRTAP1-4P0C5Y4 121 aa13.56□□□□□ -0.24
RAB40B-201ENST00000269347 Q5XG85 94 aa13.56□□□□□ -0.24
RAB40B-201ENST00000269347 CASC2Q6XLA1 102 aa13.56□□□□□ -0.24
RAB40B-201ENST00000269347 ZCCHC13Q8WW36 166 aaKnown RBP13.56□□□□□ -0.24
RAB40B-201ENST00000269347 MMP24-AS1A0A0U1RRL7 71 aa13.52□□□□□ -0.24
RAB40B-201ENST00000269347 RYR3Q15413 4870 aa13.52□□□□□ -0.24
RAB40B-201ENST00000269347 C4orf26Q17RF5 130 aa13.49□□□□□ -0.25
RAB40B-201ENST00000269347 NOTCH2NLQ7Z3S9 236 aa13.49□□□□□ -0.25
RAB40B-201ENST00000269347 NDUFB1O75438 58 aa13.48□□□□□ -0.25
RAB40B-201ENST00000269347 MP68P56378 58 aa13.48□□□□□ -0.25
RAB40B-201ENST00000269347 SMIM26A0A096LP01 95 aa13.48□□□□□ -0.25
RAB40B-201ENST00000269347 SMR3BP02814 79 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms