RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 HYDINQ4G0P3 5121 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 IGLV8-61A0A075B6I0 122 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 A0A1B0GW54 56 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 HAMPP81172 84 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 Q8NBF4 154 aa10.23□□□□□ -0.77
CCDC40-201ENST00000269318 F8WEM9 126 aa10.22□□□□□ -0.77
CCDC40-201ENST00000269318 CXCL6P80162 114 aa10.22□□□□□ -0.77
CCDC40-201ENST00000269318 DNAH8Q96JB1 4490 aa10.22□□□□□ -0.77
CCDC40-201ENST00000269318 KRTAP10-2P60368 255 aa10.21□□□□□ -0.77
CCDC40-201ENST00000269318 SPRR4Q96PI1 79 aa10.21□□□□□ -0.78
CCDC40-201ENST00000269318 DNAH5Q8TE73 4624 aa10.2□□□□□ -0.78
CCDC40-201ENST00000269318 SRRM2Q9UQ35 2752 aaKnown RBP10.19□□□□□ -0.78
CCDC40-201ENST00000269318 PSORS1C2Q9UIG4 136 aa10.19□□□□□ -0.78
CCDC40-201ENST00000269318 IGFL1Q6UW32 110 aa10.18□□□□□ -0.78
CCDC40-201ENST00000269318 NREPQ16612 68 aa10.17□□□□□ -0.78
CCDC40-201ENST00000269318 FAT2Q9NYQ8 4349 aa10.17□□□□□ -0.78
CCDC40-201ENST00000269318 CRYGAP11844 174 aa10.16□□□□□ -0.78
CCDC40-201ENST00000269318 A0A0G2JQZ4 141 aa10.15□□□□□ -0.78
CCDC40-201ENST00000269318 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
CCDC40-201ENST00000269318 PKD1P98161 4303 aa10.15□□□□□ -0.78
CCDC40-201ENST00000269318 ATOX1O00244 68 aa10.14□□□□□ -0.79
CCDC40-201ENST00000269318 FAM30AQ9NZY2 134 aa10.14□□□□□ -0.79
CCDC40-201ENST00000269318 CCDC179H3BU77 68 aa10.12□□□□□ -0.79
CCDC40-201ENST00000269318 LINC00483Q53H64 154 aa10.1□□□□□ -0.79
CCDC40-201ENST00000269318 ZNF861PO60384 105 aa10.1□□□□□ -0.79
CCDC40-201ENST00000269318 Q6ZSA8 131 aa10.1□□□□□ -0.79
CCDC40-201ENST00000269318 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
CCDC40-201ENST00000269318 BPY2O14599 106 aa10.09□□□□□ -0.79
CCDC40-201ENST00000269318 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
CCDC40-201ENST00000269318 SACSQ9NZJ4 4579 aa10.08□□□□□ -0.8
CCDC40-201ENST00000269318 IGKV4-1P06312 121 aa10.06□□□□□ -0.8
CCDC40-201ENST00000269318 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-201ENST00000269318 Q8N9L7 120 aa10.05□□□□□ -0.8
CCDC40-201ENST00000269318 IGLV7-43P04211 117 aa10.05□□□□□ -0.8
CCDC40-201ENST00000269318 COX7CP15954 63 aa10.04□□□□□ -0.8
CCDC40-201ENST00000269318 A0A087WSZ3 146 aa10.03□□□□□ -0.8
CCDC40-201ENST00000269318 UQCRQO14949 82 aa10.03□□□□□ -0.8
CCDC40-201ENST00000269318 SERP2Q8N6R1 65 aa10.03□□□□□ -0.8
CCDC40-201ENST00000269318 LCE6AA0A183 80 aa10.01□□□□□ -0.81
CCDC40-201ENST00000269318 IGLV9-49A0A0B4J1Y8 123 aa10□□□□□ -0.81
CCDC40-201ENST00000269318 DSCR10P59022 87 aa10□□□□□ -0.81
CCDC40-201ENST00000269318 RPL37AP61513 92 aaKnown RBP9.98□□□□□ -0.81
CCDC40-201ENST00000269318 C9orf153Q5TBE3 101 aa9.97□□□□□ -0.81
CCDC40-201ENST00000269318 ANAPC11Q9NYG5 84 aa9.97□□□□□ -0.81
CCDC40-201ENST00000269318 LRP1BQ9NZR2 4599 aa9.96□□□□□ -0.81
CCDC40-201ENST00000269318 K7EQZ3 153 aa9.94□□□□□ -0.82
CCDC40-201ENST00000269318 MOBPQ13875 183 aa9.93□□□□□ -0.82
CCDC40-201ENST00000269318 DEFB116Q30KQ4 102 aa9.93□□□□□ -0.82
CCDC40-201ENST00000269318 TRAV7A0A075B6U4 112 aa9.92□□□□□ -0.82
CCDC40-201ENST00000269318 LINC00336Q6ZUF6 198 aa9.92□□□□□ -0.82
CCDC40-201ENST00000269318 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
CCDC40-201ENST00000269318 LINC00472Q9H8W2 130 aa9.92□□□□□ -0.82
CCDC40-201ENST00000269318 PKHD1P08F94 4074 aa9.89□□□□□ -0.83
CCDC40-201ENST00000269318 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
CCDC40-201ENST00000269318 CYSTM1Q9H1C7 97 aa9.86□□□□□ -0.83
CCDC40-201ENST00000269318 HRCT1Q6UXD1 115 aa9.85□□□□□ -0.83
CCDC40-201ENST00000269318 RYR2Q92736 4967 aa9.85□□□□□ -0.83
CCDC40-201ENST00000269318 OCR1Q9BZK8 76 aa9.84□□□□□ -0.83
CCDC40-201ENST00000269318 Q96NJ1 140 aa9.84□□□□□ -0.83
CCDC40-201ENST00000269318 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
CCDC40-201ENST00000269318 A8MWP4 228 aa9.83□□□□□ -0.84
CCDC40-201ENST00000269318 HCG22E2RYF7 251 aa9.82□□□□□ -0.84
CCDC40-201ENST00000269318 SS18L2Q9UHA2 77 aa9.81□□□□□ -0.84
CCDC40-201ENST00000269318 J3KT08 172 aa9.81□□□□□ -0.84
CCDC40-201ENST00000269318 PRR15Q8IV56 129 aa9.81□□□□□ -0.84
CCDC40-201ENST00000269318 C20orf197Q8N268 126 aa9.81□□□□□ -0.84
CCDC40-201ENST00000269318 DYNC1H1Q14204 4646 aaKnown RBP9.8□□□□□ -0.84
CCDC40-201ENST00000269318 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
CCDC40-201ENST00000269318 KMT2CQ8NEZ4 4911 aaKnown RBP9.78□□□□□ -0.84
CCDC40-201ENST00000269318 A0A087X002 238 aa9.78□□□□□ -0.84
CCDC40-201ENST00000269318 FAM229BQ4G0N7 80 aa9.77□□□□□ -0.84
CCDC40-201ENST00000269318 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.85
CCDC40-201ENST00000269318 CD164Q04900 197 aa9.77□□□□□ -0.85
CCDC40-201ENST00000269318 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
CCDC40-201ENST00000269318 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-201ENST00000269318 KLKP1Q107X0 134 aa9.76□□□□□ -0.85
CCDC40-201ENST00000269318 WFDC13Q8IUB5 93 aa9.74□□□□□ -0.85
CCDC40-201ENST00000269318 SNURFQ9Y675 71 aa9.72□□□□□ -0.85
CCDC40-201ENST00000269318 NDUFB1O75438 58 aa9.71□□□□□ -0.86
CCDC40-201ENST00000269318 TMEM254Q8TBM7 123 aa9.71□□□□□ -0.86
CCDC40-201ENST00000269318 CASC2Q6XLA1 102 aa9.7□□□□□ -0.86
CCDC40-201ENST00000269318 MMP24-AS1A0A0U1RRL7 71 aa9.7□□□□□ -0.86
CCDC40-201ENST00000269318 APOBP04114 4563 aaKnown RBP9.7□□□□□ -0.86
CCDC40-201ENST00000269318 TMEM258P61165 79 aa9.69□□□□□ -0.86
CCDC40-201ENST00000269318 RYR3Q15413 4870 aa9.68□□□□□ -0.86
CCDC40-201ENST00000269318 H7BZZ5 65 aa9.68□□□□□ -0.86
CCDC40-201ENST00000269318 A0A0U1RQV1 116 aa9.67□□□□□ -0.86
CCDC40-201ENST00000269318 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
CCDC40-201ENST00000269318 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
CCDC40-201ENST00000269318 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-201ENST00000269318 A0A1B0GVX0 72 aa9.65□□□□□ -0.86
CCDC40-201ENST00000269318 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
CCDC40-201ENST00000269318 C8orf17Q9NRJ1 99 aa9.63□□□□□ -0.87
CCDC40-201ENST00000269318 hDV103S1A0JD37 113 aa9.63□□□□□ -0.87
CCDC40-201ENST00000269318 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-201ENST00000269318 Q5XG85 94 aa9.63□□□□□ -0.87
CCDC40-201ENST00000269318 CDK2AP2O75956 126 aa9.62□□□□□ -0.87
CCDC40-201ENST00000269318 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
CCDC40-201ENST00000269318 NDUFC1O43677 76 aa9.61□□□□□ -0.87
CCDC40-201ENST00000269318 C5orf47Q569G3 176 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms