RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 LINC00336Q6ZUF6 198 aa7.09□□□□□ -1.27
SCAF11-201ENST00000266589 SCXQ7RTU7 201 aa7.09□□□□□ -1.27
SCAF11-201ENST00000266589 F8WEM9 126 aa7.08□□□□□ -1.28
SCAF11-201ENST00000266589 HAMPP81172 84 aa7.07□□□□□ -1.28
SCAF11-201ENST00000266589 SPRR1BP22528 89 aa7.07□□□□□ -1.28
SCAF11-201ENST00000266589 SRRM2Q9UQ35 2752 aaKnown RBP7.06□□□□□ -1.28
SCAF11-201ENST00000266589 UBL5Q9BZL1 73 aa7.06□□□□□ -1.28
SCAF11-201ENST00000266589 ZNF861PO60384 105 aa7.05□□□□□ -1.28
SCAF11-201ENST00000266589 TRBV7-7A0A0K0K1E9 115 aa7.04□□□□□ -1.28
SCAF11-201ENST00000266589 Q6JHZ5 121 aa7.04□□□□□ -1.28
SCAF11-201ENST00000266589 SPRR4Q96PI1 79 aa7.04□□□□□ -1.28
SCAF11-201ENST00000266589 RYR2Q92736 4967 aa7.03□□□□□ -1.28
SCAF11-201ENST00000266589 IGLV8-61A0A075B6I0 122 aa7.03□□□□□ -1.28
SCAF11-201ENST00000266589 IGKV3D-7A0A0C4DH55 119 aa7.03□□□□□ -1.28
SCAF11-201ENST00000266589 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
SCAF11-201ENST00000266589 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
SCAF11-201ENST00000266589 Q6ZVQ6 151 aa7.03□□□□□ -1.28
SCAF11-201ENST00000266589 Q6Q795 121 aa7.02□□□□□ -1.29
SCAF11-201ENST00000266589 IGFL1Q6UW32 110 aa7.02□□□□□ -1.29
SCAF11-201ENST00000266589 Q8NBF4 154 aa7.02□□□□□ -1.29
SCAF11-201ENST00000266589 ZNF706Q9Y5V0 76 aaPredicted RBP7.02□□□□□ -1.29
SCAF11-201ENST00000266589 A0A0G2JQZ4 141 aa7.02□□□□□ -1.29
SCAF11-201ENST00000266589 A0A1B0GVY2 172 aa7.01□□□□□ -1.29
SCAF11-201ENST00000266589 ATP5EP2Q5VTU8 51 aa7□□□□□ -1.29
SCAF11-201ENST00000266589 IMUPQ9GZP8 106 aa7□□□□□ -1.29
SCAF11-201ENST00000266589 LINC00483Q53H64 154 aa7□□□□□ -1.29
SCAF11-201ENST00000266589 KMT2CQ8NEZ4 4911 aaKnown RBP6.99□□□□□ -1.29
SCAF11-201ENST00000266589 A0A1B0GW54 56 aa6.99□□□□□ -1.29
SCAF11-201ENST00000266589 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
SCAF11-201ENST00000266589 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
SCAF11-201ENST00000266589 CRYGAP11844 174 aa6.97□□□□□ -1.29
SCAF11-201ENST00000266589 NREPQ16612 68 aa6.97□□□□□ -1.29
SCAF11-201ENST00000266589 C9orf153Q5TBE3 101 aa6.96□□□□□ -1.29
SCAF11-201ENST00000266589 ANAPC11Q9NYG5 84 aa6.96□□□□□ -1.3
SCAF11-201ENST00000266589 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
SCAF11-201ENST00000266589 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
SCAF11-201ENST00000266589 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
SCAF11-201ENST00000266589 CXCL6P80162 114 aa6.94□□□□□ -1.3
SCAF11-201ENST00000266589 LRP1BQ9NZR2 4599 aa6.94□□□□□ -1.3
SCAF11-201ENST00000266589 A0A087WVE0 104 aa6.94□□□□□ -1.3
SCAF11-201ENST00000266589 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
SCAF11-201ENST00000266589 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
SCAF11-201ENST00000266589 A0A087WSZ3 146 aa6.92□□□□□ -1.3
SCAF11-201ENST00000266589 MOBPQ13875 183 aa6.92□□□□□ -1.3
SCAF11-201ENST00000266589 SMIM20Q8N5G0 67 aa6.92□□□□□ -1.3
SCAF11-201ENST00000266589 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
SCAF11-201ENST00000266589 BPY2O14599 106 aa6.91□□□□□ -1.3
SCAF11-201ENST00000266589 RPL37AP61513 92 aaKnown RBP6.91□□□□□ -1.3
SCAF11-201ENST00000266589 ANAPC13Q9BS18 74 aa6.88□□□□□ -1.31
SCAF11-201ENST00000266589 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-201ENST00000266589 Q8N9L7 120 aa6.87□□□□□ -1.31
SCAF11-201ENST00000266589 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
SCAF11-201ENST00000266589 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
SCAF11-201ENST00000266589 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
SCAF11-201ENST00000266589 RYR3Q15413 4870 aa6.84□□□□□ -1.31
SCAF11-201ENST00000266589 A0A087X002 238 aa6.84□□□□□ -1.31
SCAF11-201ENST00000266589 DEFB116Q30KQ4 102 aa6.84□□□□□ -1.31
SCAF11-201ENST00000266589 ATOX1O00244 68 aa6.83□□□□□ -1.32
SCAF11-201ENST00000266589 KRTAP1-4P0C5Y4 121 aa6.83□□□□□ -1.32
SCAF11-201ENST00000266589 DSCR10P59022 87 aa6.83□□□□□ -1.32
SCAF11-201ENST00000266589 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
SCAF11-201ENST00000266589 APOBP04114 4563 aaKnown RBP6.82□□□□□ -1.32
SCAF11-201ENST00000266589 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
SCAF11-201ENST00000266589 SPINK6Q6UWN8 80 aa6.81□□□□□ -1.32
SCAF11-201ENST00000266589 SSBP3-AS1Q7Z2R9 100 aa6.81□□□□□ -1.32
SCAF11-201ENST00000266589 K7EQZ3 153 aa6.8□□□□□ -1.32
SCAF11-201ENST00000266589 LINC00472Q9H8W2 130 aa6.8□□□□□ -1.32
SCAF11-201ENST00000266589 PLA2G1BP04054 148 aaKnown RBP6.78□□□□□ -1.32
SCAF11-201ENST00000266589 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-201ENST00000266589 CD164Q04900 197 aa6.77□□□□□ -1.33
SCAF11-201ENST00000266589 Q96NJ1 140 aa6.77□□□□□ -1.33
SCAF11-201ENST00000266589 J3KT08 172 aa6.75□□□□□ -1.33
SCAF11-201ENST00000266589 A8MWP4 228 aa6.74□□□□□ -1.33
SCAF11-201ENST00000266589 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
SCAF11-201ENST00000266589 SERP2Q8N6R1 65 aa6.73□□□□□ -1.33
SCAF11-201ENST00000266589 COX7CP15954 63 aa6.73□□□□□ -1.33
SCAF11-201ENST00000266589 TYMSOSQ8TAI1 123 aa6.73□□□□□ -1.33
SCAF11-201ENST00000266589 PRR15Q8IV56 129 aa6.72□□□□□ -1.33
SCAF11-201ENST00000266589 FAT1Q14517 4588 aa6.72□□□□□ -1.33
SCAF11-201ENST00000266589 HCG22E2RYF7 251 aa6.72□□□□□ -1.33
SCAF11-201ENST00000266589 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
SCAF11-201ENST00000266589 UQCRQO14949 82 aa6.71□□□□□ -1.34
SCAF11-201ENST00000266589 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.34
SCAF11-201ENST00000266589 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
SCAF11-201ENST00000266589 NDUFB1O75438 58 aa6.7□□□□□ -1.34
SCAF11-201ENST00000266589 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-201ENST00000266589 TRAV7A0A075B6U4 112 aa6.69□□□□□ -1.34
SCAF11-201ENST00000266589 WFDC13Q8IUB5 93 aa6.69□□□□□ -1.34
SCAF11-201ENST00000266589 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
SCAF11-201ENST00000266589 C4orf48Q5BLP8 95 aa6.67□□□□□ -1.34
SCAF11-201ENST00000266589 Q5VSD8 79 aa6.67□□□□□ -1.34
SCAF11-201ENST00000266589 Q5XG85 94 aa6.67□□□□□ -1.34
SCAF11-201ENST00000266589 LIMD2Q9BT23 127 aa6.66□□□□□ -1.34
SCAF11-201ENST00000266589 OCR1Q9BZK8 76 aa6.66□□□□□ -1.34
SCAF11-201ENST00000266589 MMP24-AS1A0A0U1RRL7 71 aa6.65□□□□□ -1.34
SCAF11-201ENST00000266589 A0A1B0GVX0 72 aa6.65□□□□□ -1.34
SCAF11-201ENST00000266589 CASC2Q6XLA1 102 aa6.65□□□□□ -1.34
SCAF11-201ENST00000266589 IGHV6-1A0A0B4J1U7 121 aa6.65□□□□□ -1.35
SCAF11-201ENST00000266589 KRTAP29-1A8MX34 341 aaPredicted RBP6.65□□□□□ -1.35
SCAF11-201ENST00000266589 LINC00304Q8N9R0 145 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms