RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PKIGQ9Y2B9 76 aa10.64□□□□□ -0.71
SQLE-201ENST00000265896 KRTAP11-1Q8IUC1 163 aa10.64□□□□□ -0.71
SQLE-201ENST00000265896 PSCAO43653 123 aa10.63□□□□□ -0.71
SQLE-201ENST00000265896 IGFL1Q6UW32 110 aa10.62□□□□□ -0.71
SQLE-201ENST00000265896 SPRR1AP35321 89 aa10.62□□□□□ -0.71
SQLE-201ENST00000265896 NDUFC1O43677 76 aa10.61□□□□□ -0.71
SQLE-201ENST00000265896 PHF5AQ7RTV0 110 aaKnown RBP10.61□□□□□ -0.71
SQLE-201ENST00000265896 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
SQLE-201ENST00000265896 DNAH3Q8TD57 4116 aa10.58□□□□□ -0.72
SQLE-201ENST00000265896 K7EIL1 84 aa10.56□□□□□ -0.72
SQLE-201ENST00000265896 HCG22E2RYF7 251 aa10.54□□□□□ -0.72
SQLE-201ENST00000265896 UBE2AP49459 152 aa10.54□□□□□ -0.72
SQLE-201ENST00000265896 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
SQLE-201ENST00000265896 UBE2DNLQ8IWF7 75 aa10.53□□□□□ -0.72
SQLE-201ENST00000265896 PLA2G2DQ9UNK4 145 aa10.53□□□□□ -0.72
SQLE-201ENST00000265896 C1orf64Q8NEQ6 169 aa10.52□□□□□ -0.73
SQLE-201ENST00000265896 PSPHP1O15172 72 aa10.52□□□□□ -0.73
SQLE-201ENST00000265896 PLECQ15149 4684 aaKnown RBP10.51□□□□□ -0.73
SQLE-201ENST00000265896 IGLV5-37A0A075B6J1 123 aa10.5□□□□□ -0.73
SQLE-201ENST00000265896 TGP01266 2768 aa10.5□□□□□ -0.73
SQLE-201ENST00000265896 F8WDY8 70 aa10.5□□□□□ -0.73
SQLE-201ENST00000265896 LINC00208Q96KT6 92 aa10.5□□□□□ -0.73
SQLE-201ENST00000265896 PANO1I0J062 215 aa10.49□□□□□ -0.73
SQLE-201ENST00000265896 PRO0628Q9UI54 55 aa10.47□□□□□ -0.73
SQLE-201ENST00000265896 FRAS1Q86XX4 4008 aa10.46□□□□□ -0.73
SQLE-201ENST00000265896 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
SQLE-201ENST00000265896 ATP5EP56381 51 aaPredicted RBP10.45□□□□□ -0.74
SQLE-201ENST00000265896 H0Y9J4 135 aa10.44□□□□□ -0.74
SQLE-201ENST00000265896 IGLV9-49A0A0B4J1Y8 123 aa10.44□□□□□ -0.74
SQLE-201ENST00000265896 hDV103S1A0JD37 113 aa10.43□□□□□ -0.74
SQLE-201ENST00000265896 ANAPC11Q9NYG5 84 aa10.41□□□□□ -0.74
SQLE-201ENST00000265896 ZCCHC13Q8WW36 166 aaKnown RBP10.39□□□□□ -0.75
SQLE-201ENST00000265896 CASC2Q6XLA1 102 aa10.39□□□□□ -0.75
SQLE-201ENST00000265896 A8MU10 97 aa10.37□□□□□ -0.75
SQLE-201ENST00000265896 CNBPP62633 177 aaKnown RBP10.36□□□□□ -0.75
SQLE-201ENST00000265896 H0Y9P7 68 aa10.36□□□□□ -0.75
SQLE-201ENST00000265896 MP68P56378 58 aa10.36□□□□□ -0.75
SQLE-201ENST00000265896 LCE6AA0A183 80 aa10.35□□□□□ -0.75
SQLE-201ENST00000265896 PCOTHQ58A44 107 aa10.34□□□□□ -0.75
SQLE-201ENST00000265896 A0A1B0GW54 56 aa10.33□□□□□ -0.76
SQLE-201ENST00000265896 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
SQLE-201ENST00000265896 A8MUN3 132 aa10.32□□□□□ -0.76
SQLE-201ENST00000265896 STARD9Q9P2P6 4700 aa10.31□□□□□ -0.76
SQLE-201ENST00000265896 KMT2AQ03164 3969 aa10.31□□□□□ -0.76
SQLE-201ENST00000265896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.31□□□□□ -0.76
SQLE-201ENST00000265896 TRAV22A0A0B4J277 110 aa10.3□□□□□ -0.76
SQLE-201ENST00000265896 KRTAP29-1A8MX34 341 aaPredicted RBP10.29□□□□□ -0.76
SQLE-201ENST00000265896 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
SQLE-201ENST00000265896 NDUFS5O43920 106 aa10.27□□□□□ -0.76
SQLE-201ENST00000265896 FBN3Q75N90 2809 aa10.27□□□□□ -0.76
SQLE-201ENST00000265896 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.76
SQLE-201ENST00000265896 B9D2Q9BPU9 175 aa10.26□□□□□ -0.77
SQLE-201ENST00000265896 MEGF8Q7Z7M0 2845 aa10.26□□□□□ -0.77
SQLE-201ENST00000265896 A8MWP4 228 aa10.26□□□□□ -0.77
SQLE-201ENST00000265896 C9orf163Q8N9P6 203 aa10.25□□□□□ -0.77
SQLE-201ENST00000265896 MDFIQ99750 246 aa10.25□□□□□ -0.77
SQLE-201ENST00000265896 IGLV8-61A0A075B6I0 122 aa10.24□□□□□ -0.77
SQLE-201ENST00000265896 IGHV6-1A0A0B4J1U7 121 aa10.23□□□□□ -0.77
SQLE-201ENST00000265896 DNAH8Q96JB1 4490 aa10.22□□□□□ -0.77
SQLE-201ENST00000265896 SPINK6Q6UWN8 80 aa10.21□□□□□ -0.77
SQLE-201ENST00000265896 PRKDCP78527 4128 aaKnown RBP10.21□□□□□ -0.77
SQLE-201ENST00000265896 C1orf195Q5TG92 126 aa10.21□□□□□ -0.78
SQLE-201ENST00000265896 A0A087X002 238 aa10.2□□□□□ -0.78
SQLE-201ENST00000265896 NBDYA0A0U1RRE5 68 aa10.2□□□□□ -0.78
SQLE-201ENST00000265896 MMP24-AS1A0A0U1RRL7 71 aa10.2□□□□□ -0.78
SQLE-201ENST00000265896 NOTCH2NLQ7Z3S9 236 aa10.2□□□□□ -0.78
SQLE-201ENST00000265896 MOBPQ13875 183 aa10.19□□□□□ -0.78
SQLE-201ENST00000265896 DNAH2Q9P225 4427 aa10.18□□□□□ -0.78
SQLE-201ENST00000265896 NDUFB1O75438 58 aa10.17□□□□□ -0.78
SQLE-201ENST00000265896 Q1T7F1 81 aa10.17□□□□□ -0.78
SQLE-201ENST00000265896 HECTD4Q9Y4D8 3996 aa10.16□□□□□ -0.78
SQLE-201ENST00000265896 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
SQLE-201ENST00000265896 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
SQLE-201ENST00000265896 C14orf177Q52M58 125 aa10.16□□□□□ -0.78
SQLE-201ENST00000265896 PRR15LQ9BU68 103 aa10.15□□□□□ -0.78
SQLE-201ENST00000265896 CHKB-CPT1BH3BT56 60 aa10.14□□□□□ -0.79
SQLE-201ENST00000265896 SPRR1BP22528 89 aa10.13□□□□□ -0.79
SQLE-201ENST00000265896 VPS13DQ5THJ4 4388 aa10.12□□□□□ -0.79
SQLE-201ENST00000265896 Q96NJ1 140 aa10.12□□□□□ -0.79
SQLE-201ENST00000265896 PSORS1C2Q9UIG4 136 aa10.12□□□□□ -0.79
SQLE-201ENST00000265896 DNAH6Q9C0G6 4158 aa10.11□□□□□ -0.79
SQLE-201ENST00000265896 Q6ZRN7 208 aaPredicted RBP10.11□□□□□ -0.79
SQLE-201ENST00000265896 CD164Q04900 197 aa10.11□□□□□ -0.79
SQLE-201ENST00000265896 Q5VV11 94 aa10.1□□□□□ -0.79
SQLE-201ENST00000265896 KRTAP13-1Q8IUC0 172 aa10.1□□□□□ -0.79
SQLE-201ENST00000265896 COA5Q86WW8 74 aa10.09□□□□□ -0.79
SQLE-201ENST00000265896 SPTSSBQ8NFR3 76 aa10.09□□□□□ -0.79
SQLE-201ENST00000265896 SPAG11AQ6PDA7 123 aa10.09□□□□□ -0.79
SQLE-201ENST00000265896 RETNLBQ9BQ08 111 aa10.09□□□□□ -0.79
SQLE-201ENST00000265896 Q8N9P0 234 aaPredicted RBP10.08□□□□□ -0.8
SQLE-201ENST00000265896 SPACA4Q8TDM5 124 aa10.08□□□□□ -0.8
SQLE-201ENST00000265896 C8orf17Q9NRJ1 99 aa10.07□□□□□ -0.8
SQLE-201ENST00000265896 CIRBP-AS1Q8TBR5 109 aa10.05□□□□□ -0.8
SQLE-201ENST00000265896 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
SQLE-201ENST00000265896 A0A087WTM6 91 aa10.04□□□□□ -0.8
SQLE-201ENST00000265896 RTL8CO15255 209 aa10.04□□□□□ -0.8
SQLE-201ENST00000265896 DYNC2H1Q8NCM8 4307 aaKnown RBP10.03□□□□□ -0.8
SQLE-201ENST00000265896 DNHD1Q96M86 4753 aa10.03□□□□□ -0.8
SQLE-201ENST00000265896 WWC2-AS2Q96NR7 200 aa10.02□□□□□ -0.8
SQLE-201ENST00000265896 DNAH11Q96DT5 4516 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms