RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 AKAP13Q12802 2813 aa6.62□□□□□ -1.35
CPT1A-201ENST00000265641 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
CPT1A-201ENST00000265641 Q8N1X5 172 aa6.6□□□□□ -1.35
CPT1A-201ENST00000265641 SZT2Q5T011 3432 aa6.6□□□□□ -1.35
CPT1A-201ENST00000265641 Q5W150 140 aa6.6□□□□□ -1.35
CPT1A-201ENST00000265641 PRUNE2Q8WUY3 3088 aa6.59□□□□□ -1.35
CPT1A-201ENST00000265641 FLNAP21333 2647 aaKnown RBP6.58□□□□□ -1.36
CPT1A-201ENST00000265641 KRTAP1-3Q8IUG1 177 aa6.58□□□□□ -1.36
CPT1A-201ENST00000265641 KRTAP10-3P60369 221 aa6.58□□□□□ -1.36
CPT1A-201ENST00000265641 ANAPC11Q9NYG5 84 aa6.56□□□□□ -1.36
CPT1A-201ENST00000265641 XIRP2A4UGR9 3374 aa6.56□□□□□ -1.36
CPT1A-201ENST00000265641 MGAM2Q2M2H8 2515 aa6.56□□□□□ -1.36
CPT1A-201ENST00000265641 A0A0D9SG42 100 aa6.56□□□□□ -1.36
CPT1A-201ENST00000265641 LINC00304Q8N9R0 145 aa6.56□□□□□ -1.36
CPT1A-201ENST00000265641 KRTAP26-1Q6PEX3 210 aa6.55□□□□□ -1.36
CPT1A-201ENST00000265641 CHD6Q8TD26 2715 aa6.55□□□□□ -1.36
CPT1A-201ENST00000265641 CENPEQ02224 2701 aa6.55□□□□□ -1.36
CPT1A-201ENST00000265641 KRTAP10-11P60412 298 aa6.54□□□□□ -1.36
CPT1A-201ENST00000265641 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
CPT1A-201ENST00000265641 ATRQ13535 2644 aa6.54□□□□□ -1.36
CPT1A-201ENST00000265641 KRTAP24-1Q3LI83 254 aa6.54□□□□□ -1.36
CPT1A-201ENST00000265641 RPL37P61927 97 aaKnown RBP6.54□□□□□ -1.36
CPT1A-201ENST00000265641 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
CPT1A-201ENST00000265641 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
CPT1A-201ENST00000265641 TRIOO75962 3097 aa6.52□□□□□ -1.37
CPT1A-201ENST00000265641 ITPR3Q14573 2671 aa6.51□□□□□ -1.37
CPT1A-201ENST00000265641 DNAH14Q0VDD8 3507 aa6.51□□□□□ -1.37
CPT1A-201ENST00000265641 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
CPT1A-201ENST00000265641 SPTBN5Q9NRC6 3674 aaKnown RBP6.5□□□□□ -1.37
CPT1A-201ENST00000265641 KRTAP1-1Q07627 177 aa6.5□□□□□ -1.37
CPT1A-201ENST00000265641 GCN1Q92616 2671 aaKnown RBP6.49□□□□□ -1.37
CPT1A-201ENST00000265641 UNC79Q9P2D8 2635 aa6.49□□□□□ -1.37
CPT1A-201ENST00000265641 A0A087WTM6 91 aa6.49□□□□□ -1.37
CPT1A-201ENST00000265641 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
CPT1A-201ENST00000265641 MGAQ8IWI9 3026 aa6.47□□□□□ -1.37
CPT1A-201ENST00000265641 REV3LO60673 3130 aa6.46□□□□□ -1.37
CPT1A-201ENST00000265641 K7EIL1 84 aa6.45□□□□□ -1.38
CPT1A-201ENST00000265641 NBEAQ8NFP9 2946 aa6.43□□□□□ -1.38
CPT1A-201ENST00000265641 HECTD1Q9ULT8 2610 aa6.43□□□□□ -1.38
CPT1A-201ENST00000265641 FRYQ5TBA9 3013 aa6.43□□□□□ -1.38
CPT1A-201ENST00000265641 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
CPT1A-201ENST00000265641 LAMA1P25391 3075 aa6.42□□□□□ -1.38
CPT1A-201ENST00000265641 A8MU10 97 aa6.42□□□□□ -1.38
CPT1A-201ENST00000265641 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
CPT1A-201ENST00000265641 DSPP15924 2871 aaKnown RBP6.41□□□□□ -1.38
CPT1A-201ENST00000265641 TNRC18O15417 2968 aaPredicted RBP6.4□□□□□ -1.38
CPT1A-201ENST00000265641 FLNBO75369 2602 aaKnown RBP6.4□□□□□ -1.38
CPT1A-201ENST00000265641 ZNF292O60281 2723 aa6.4□□□□□ -1.39
CPT1A-201ENST00000265641 C9orf92A6NGG3 77 aa6.39□□□□□ -1.39
CPT1A-201ENST00000265641 VPS13AQ96RL7 3174 aa6.39□□□□□ -1.39
CPT1A-201ENST00000265641 VCANP13611 3396 aa6.39□□□□□ -1.39
CPT1A-201ENST00000265641 MAP1AP78559 2803 aaPredicted RBP6.38□□□□□ -1.39
CPT1A-201ENST00000265641 PANO1I0J062 215 aa6.38□□□□□ -1.39
CPT1A-201ENST00000265641 MAST4O15021 2626 aa6.38□□□□□ -1.39
CPT1A-201ENST00000265641 NBEAL2Q6ZNJ1 2754 aa6.37□□□□□ -1.39
CPT1A-201ENST00000265641 WDFY4Q6ZS81 3184 aa6.37□□□□□ -1.39
CPT1A-201ENST00000265641 FREM2Q5SZK8 3169 aa6.37□□□□□ -1.39
CPT1A-201ENST00000265641 NOTCH1P46531 2555 aa6.36□□□□□ -1.39
CPT1A-201ENST00000265641 NBEAL1Q6ZS30 2694 aa6.36□□□□□ -1.39
CPT1A-201ENST00000265641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
CPT1A-201ENST00000265641 WWC2-AS2Q96NR7 200 aa6.36□□□□□ -1.39
CPT1A-201ENST00000265641 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
CPT1A-201ENST00000265641 EYSQ5T1H1 3165 aa6.35□□□□□ -1.39
CPT1A-201ENST00000265641 CFAP46Q8IYW2 2715 aa6.34□□□□□ -1.39
CPT1A-201ENST00000265641 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
CPT1A-201ENST00000265641 NDUFAF8A1L188 74 aa6.32□□□□□ -1.4
CPT1A-201ENST00000265641 S4R3F8 94 aa6.32□□□□□ -1.4
CPT1A-201ENST00000265641 SEC61BP60468 96 aaKnown RBP6.32□□□□□ -1.4
CPT1A-201ENST00000265641 KALRNO60229 2985 aa6.31□□□□□ -1.4
CPT1A-201ENST00000265641 HELZ2Q9BYK8 2649 aaKnown RBP6.3□□□□□ -1.4
CPT1A-201ENST00000265641 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
CPT1A-201ENST00000265641 ITPR1Q14643 2758 aa6.29□□□□□ -1.4
CPT1A-201ENST00000265641 A8MUU9 505 aa6.27□□□□□ -1.41
CPT1A-201ENST00000265641 COL6A3P12111 3177 aa6.27□□□□□ -1.41
CPT1A-201ENST00000265641 COL6A5A8TX70 2615 aa6.26□□□□□ -1.41
CPT1A-201ENST00000265641 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
CPT1A-201ENST00000265641 CELSR3Q9NYQ7 3312 aa6.24□□□□□ -1.41
CPT1A-201ENST00000265641 TEX15Q9BXT5 2789 aa6.23□□□□□ -1.41
CPT1A-201ENST00000265641 SPEGQ15772 3267 aa6.23□□□□□ -1.41
CPT1A-201ENST00000265641 C20orf166-AS1Q96NR2 134 aa6.22□□□□□ -1.41
CPT1A-201ENST00000265641 KRTAP1-5Q9BYS1 174 aa6.21□□□□□ -1.41
CPT1A-201ENST00000265641 DMBT1Q9UGM3 2413 aaPredicted RBP6.21□□□□□ -1.42
CPT1A-201ENST00000265641 USP34Q70CQ2 3546 aa6.21□□□□□ -1.42
CPT1A-201ENST00000265641 STAB1Q9NY15 2570 aa6.2□□□□□ -1.42
CPT1A-201ENST00000265641 SETXQ7Z333 2677 aaKnown RBP6.2□□□□□ -1.42
CPT1A-201ENST00000265641 FLG2Q5D862 2391 aaPredicted RBP6.19□□□□□ -1.42
CPT1A-201ENST00000265641 BAHCC1Q9P281 2608 aa6.17□□□□□ -1.42
CPT1A-201ENST00000265641 SMR3BP02814 79 aaPredicted RBP6.17□□□□□ -1.42
CPT1A-201ENST00000265641 MYO15AQ9UKN7 3530 aa6.17□□□□□ -1.42
CPT1A-201ENST00000265641 UBR5O95071 2799 aaPredicted RBP6.15□□□□□ -1.42
CPT1A-201ENST00000265641 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
CPT1A-201ENST00000265641 FRYLO94915 3013 aa6.14□□□□□ -1.43
CPT1A-201ENST00000265641 R4GN34 69 aa6.14□□□□□ -1.43
CPT1A-201ENST00000265641 ADGRG4Q8IZF6 3080 aa6.14□□□□□ -1.43
CPT1A-201ENST00000265641 RPS29P62273 56 aaKnown RBP6.13□□□□□ -1.43
CPT1A-201ENST00000265641 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
CPT1A-201ENST00000265641 M0QZ58 72 aa6.11□□□□□ -1.43
CPT1A-201ENST00000265641 Q6ZSA8 131 aa6.11□□□□□ -1.43
CPT1A-201ENST00000265641 ASH1LQ9NR48 2969 aaKnown RBP6.1□□□□□ -1.43
CPT1A-201ENST00000265641 STAB2Q8WWQ8 2551 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms