RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PHF5AQ7RTV0 110 aaKnown RBP5.66□□□□□ -1.5
VAPB-201ENST00000265619 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
VAPB-201ENST00000265619 MOBPQ13875 183 aa5.66□□□□□ -1.5
VAPB-201ENST00000265619 TENM2Q9NT68 2774 aa5.66□□□□□ -1.5
VAPB-201ENST00000265619 ATP11AUNQ6ZP68 121 aa5.66□□□□□ -1.5
VAPB-201ENST00000265619 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
VAPB-201ENST00000265619 LINC00313P59037 77 aa5.65□□□□□ -1.51
VAPB-201ENST00000265619 PRAC1Q96KF2 57 aa5.65□□□□□ -1.51
VAPB-201ENST00000265619 IGLV5-48A0A075B6I7 105 aa5.64□□□□□ -1.51
VAPB-201ENST00000265619 SPART-AS1P0CW21 52 aa5.64□□□□□ -1.51
VAPB-201ENST00000265619 SRRM2Q9UQ35 2752 aaKnown RBP5.64□□□□□ -1.51
VAPB-201ENST00000265619 RPL37AP61513 92 aaKnown RBP5.63□□□□□ -1.51
VAPB-201ENST00000265619 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
VAPB-201ENST00000265619 WFDC10BQ8IUB3 73 aa5.63□□□□□ -1.51
VAPB-201ENST00000265619 PRO0255Q9UI72 69 aa5.63□□□□□ -1.51
VAPB-201ENST00000265619 Q75L30 129 aa5.63□□□□□ -1.51
VAPB-201ENST00000265619 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
VAPB-201ENST00000265619 H0Y9J4 135 aa5.62□□□□□ -1.51
VAPB-201ENST00000265619 C1orf137Q5JT78 98 aa5.62□□□□□ -1.51
VAPB-201ENST00000265619 CAMK2N2Q96S95 79 aa5.62□□□□□ -1.51
VAPB-201ENST00000265619 LIMD2Q9BT23 127 aa5.62□□□□□ -1.51
VAPB-201ENST00000265619 SPINK7P58062 85 aa5.61□□□□□ -1.51
VAPB-201ENST00000265619 Q8NAQ8 132 aa5.61□□□□□ -1.51
VAPB-201ENST00000265619 Q9BRP9 147 aa5.61□□□□□ -1.51
VAPB-201ENST00000265619 TNP2Q05952 138 aa5.6□□□□□ -1.51
VAPB-201ENST00000265619 TGP01266 2768 aa5.6□□□□□ -1.51
VAPB-201ENST00000265619 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
VAPB-201ENST00000265619 Q8NBF4 154 aa5.6□□□□□ -1.51
VAPB-201ENST00000265619 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
VAPB-201ENST00000265619 GVQW2A0A096LPI5 108 aaPredicted RBP5.59□□□□□ -1.51
VAPB-201ENST00000265619 COA5Q86WW8 74 aa5.59□□□□□ -1.51
VAPB-201ENST00000265619 LOC101927531A0A1B0GV80 90 aa5.59□□□□□ -1.52
VAPB-201ENST00000265619 RPL37AP8A6NKH3 93 aa5.59□□□□□ -1.52
VAPB-201ENST00000265619 SPAG11AQ6PDA7 123 aa5.59□□□□□ -1.52
VAPB-201ENST00000265619 ANK2Q01484 3957 aa5.58□□□□□ -1.52
VAPB-201ENST00000265619 DEFB131BA0A096LNP1 70 aa5.57□□□□□ -1.52
VAPB-201ENST00000265619 H0Y9P7 68 aa5.57□□□□□ -1.52
VAPB-201ENST00000265619 IGKV2D-24A0A075B6R9 120 aa5.57□□□□□ -1.52
VAPB-201ENST00000265619 NDUFB1O75438 58 aa5.57□□□□□ -1.52
VAPB-201ENST00000265619 SPRR4Q96PI1 79 aa5.57□□□□□ -1.52
VAPB-201ENST00000265619 K7EIL1 84 aa5.56□□□□□ -1.52
VAPB-201ENST00000265619 C9orf163Q8N9P6 203 aa5.56□□□□□ -1.52
VAPB-201ENST00000265619 FAM168BA1KXE4 195 aa5.55□□□□□ -1.52
VAPB-201ENST00000265619 PRR34Q9NV39 138 aa5.55□□□□□ -1.52
VAPB-201ENST00000265619 KRTAP29-1A8MX34 341 aaPredicted RBP5.55□□□□□ -1.52
VAPB-201ENST00000265619 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
VAPB-201ENST00000265619 SPANXA2-OT1Q8N9U9 137 aa5.54□□□□□ -1.52
VAPB-201ENST00000265619 PCOTHQ58A44 107 aa5.54□□□□□ -1.52
VAPB-201ENST00000265619 C15orf56Q8N910 161 aa5.54□□□□□ -1.52
VAPB-201ENST00000265619 PLAC8Q9NZF1 115 aa5.53□□□□□ -1.52
VAPB-201ENST00000265619 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
VAPB-201ENST00000265619 Q6ZRX8 168 aa5.52□□□□□ -1.53
VAPB-201ENST00000265619 LINC00476Q8WZB0 136 aa5.52□□□□□ -1.53
VAPB-201ENST00000265619 KRTAP4-16G5E9R7 235 aaPredicted RBP5.52□□□□□ -1.53
VAPB-201ENST00000265619 EGFEM1PQ0D2K5 195 aa5.51□□□□□ -1.53
VAPB-201ENST00000265619 KRTAP26-1Q6PEX3 210 aa5.51□□□□□ -1.53
VAPB-201ENST00000265619 IGLV1-50A0A075B6I6 118 aa5.51□□□□□ -1.53
VAPB-201ENST00000265619 CNBPP62633 177 aaKnown RBP5.51□□□□□ -1.53
VAPB-201ENST00000265619 A0A087WSZ3 146 aa5.51□□□□□ -1.53
VAPB-201ENST00000265619 IGHV6-1A0A0B4J1U7 121 aa5.5□□□□□ -1.53
VAPB-201ENST00000265619 IGFL1Q6UW32 110 aa5.5□□□□□ -1.53
VAPB-201ENST00000265619 KRTAP7-1Q8IUC3 87 aa5.5□□□□□ -1.53
VAPB-201ENST00000265619 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
VAPB-201ENST00000265619 A0A096LNI7 61 aa5.49□□□□□ -1.53
VAPB-201ENST00000265619 CASC2Q6XLA1 102 aa5.49□□□□□ -1.53
VAPB-201ENST00000265619 UBE2DNLQ8IWF7 75 aa5.49□□□□□ -1.53
VAPB-201ENST00000265619 LELP1Q5T871 98 aa5.48□□□□□ -1.53
VAPB-201ENST00000265619 IGLV7-46A0A075B6I9 117 aa5.48□□□□□ -1.53
VAPB-201ENST00000265619 FAM229AH3BQW9 127 aa5.47□□□□□ -1.53
VAPB-201ENST00000265619 A0A1B0GW54 56 aa5.47□□□□□ -1.53
VAPB-201ENST00000265619 IGLV5-37A0A075B6J1 123 aa5.46□□□□□ -1.53
VAPB-201ENST00000265619 DHRS4-AS1Q9P1J3 65 aa5.46□□□□□ -1.54
VAPB-201ENST00000265619 HRES1P13985 223 aa5.45□□□□□ -1.54
VAPB-201ENST00000265619 DNAH10Q8IVF4 4471 aa5.44□□□□□ -1.54
VAPB-201ENST00000265619 CMYA5Q8N3K9 4069 aa5.44□□□□□ -1.54
VAPB-201ENST00000265619 SPRR1AP35321 89 aa5.44□□□□□ -1.54
VAPB-201ENST00000265619 MEGF8Q7Z7M0 2845 aa5.43□□□□□ -1.54
VAPB-201ENST00000265619 ALMS1Q8TCU4 4167 aa5.43□□□□□ -1.54
VAPB-201ENST00000265619 LYSTQ99698 3801 aa5.41□□□□□ -1.54
VAPB-201ENST00000265619 DNAH1Q9P2D7 4330 aa5.41□□□□□ -1.54
VAPB-201ENST00000265619 DNHD1Q96M86 4753 aa5.41□□□□□ -1.54
VAPB-201ENST00000265619 H3BPC8 53 aa5.41□□□□□ -1.54
VAPB-201ENST00000265619 PRLHP81277 87 aa5.4□□□□□ -1.54
VAPB-201ENST00000265619 CASC10Q5T4H9 136 aa5.4□□□□□ -1.54
VAPB-201ENST00000265619 IGKV2-24A0A0C4DH68 120 aa5.4□□□□□ -1.55
VAPB-201ENST00000265619 MMP24-AS1A0A0U1RRL7 71 aa5.4□□□□□ -1.55
VAPB-201ENST00000265619 PLA2G1BP04054 148 aaKnown RBP5.38□□□□□ -1.55
VAPB-201ENST00000265619 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
VAPB-201ENST00000265619 A8MWP4 228 aa5.37□□□□□ -1.55
VAPB-201ENST00000265619 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
VAPB-201ENST00000265619 DNAH3Q8TD57 4116 aa5.36□□□□□ -1.55
VAPB-201ENST00000265619 RTL8CO15255 209 aa5.36□□□□□ -1.55
VAPB-201ENST00000265619 Q6ZR54 194 aa5.35□□□□□ -1.55
VAPB-201ENST00000265619 C1orf134Q5TEV5 83 aa5.35□□□□□ -1.55
VAPB-201ENST00000265619 CSAG1Q6PB30 78 aa5.35□□□□□ -1.55
VAPB-201ENST00000265619 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.55
VAPB-201ENST00000265619 REG3GQ6UW15 175 aa5.34□□□□□ -1.55
VAPB-201ENST00000265619 LINC01556Q5JQF7 62 aa5.34□□□□□ -1.56
VAPB-201ENST00000265619 KRTAP11-1Q8IUC1 163 aa5.33□□□□□ -1.56
VAPB-201ENST00000265619 KRTAP1-5Q9BYS1 174 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms