RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 ITPR1Q14643 2758 aa9.45□□□□□ -0.9
AFF4-201ENST00000265343 UTP20O75691 2785 aaKnown RBP9.45□□□□□ -0.9
AFF4-201ENST00000265343 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
AFF4-201ENST00000265343 C19orf73Q9NVV2 129 aa9.43□□□□□ -0.9
AFF4-201ENST00000265343 SPINK7P58062 85 aa9.43□□□□□ -0.9
AFF4-201ENST00000265343 CFAP54Q96N23 3096 aa9.42□□□□□ -0.9
AFF4-201ENST00000265343 CYSTM1Q9H1C7 97 aa9.42□□□□□ -0.9
AFF4-201ENST00000265343 PCNTO95613 3336 aa9.41□□□□□ -0.9
AFF4-201ENST00000265343 MMP24-AS1A0A0U1RRL7 71 aa9.41□□□□□ -0.9
AFF4-201ENST00000265343 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.9
AFF4-201ENST00000265343 A0A096LNT2 108 aa9.4□□□□□ -0.91
AFF4-201ENST00000265343 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
AFF4-201ENST00000265343 S4R3F8 94 aa9.38□□□□□ -0.91
AFF4-201ENST00000265343 ANAPC11Q9NYG5 84 aa9.37□□□□□ -0.91
AFF4-201ENST00000265343 ZCCHC13Q8WW36 166 aaKnown RBP9.37□□□□□ -0.91
AFF4-201ENST00000265343 NBEAL2Q6ZNJ1 2754 aa9.36□□□□□ -0.91
AFF4-201ENST00000265343 RPL37P61927 97 aaKnown RBP9.35□□□□□ -0.91
AFF4-201ENST00000265343 NSD1Q96L73 2696 aaPredicted RBP9.35□□□□□ -0.91
AFF4-201ENST00000265343 Q6ZSA8 131 aa9.33□□□□□ -0.92
AFF4-201ENST00000265343 A0A0C4DFX4 3053 aa9.32□□□□□ -0.92
AFF4-201ENST00000265343 KRTAP24-1Q3LI83 254 aa9.31□□□□□ -0.92
AFF4-201ENST00000265343 LINC00472Q9H8W2 130 aa9.31□□□□□ -0.92
AFF4-201ENST00000265343 Q5W150 140 aa9.31□□□□□ -0.92
AFF4-201ENST00000265343 KRTAP10-11P60412 298 aa9.29□□□□□ -0.92
AFF4-201ENST00000265343 SPRR1AP35321 89 aa9.28□□□□□ -0.92
AFF4-201ENST00000265343 OXTP01178 125 aa9.28□□□□□ -0.92
AFF4-201ENST00000265343 K7EIL1 84 aa9.27□□□□□ -0.93
AFF4-201ENST00000265343 GOLGB1Q14789 3259 aaKnown RBP9.26□□□□□ -0.93
AFF4-201ENST00000265343 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.26□□□□□ -0.93
AFF4-201ENST00000265343 C5orf42Q9H799 3197 aa9.26□□□□□ -0.93
AFF4-201ENST00000265343 Q6ZR54 194 aa9.25□□□□□ -0.93
AFF4-201ENST00000265343 R4GN34 69 aa9.24□□□□□ -0.93
AFF4-201ENST00000265343 SPRR1BP22528 89 aa9.23□□□□□ -0.93
AFF4-201ENST00000265343 UBR5O95071 2799 aaPredicted RBP9.22□□□□□ -0.93
AFF4-201ENST00000265343 H1FX-AS1Q4G0G2 97 aa9.22□□□□□ -0.93
AFF4-201ENST00000265343 TRANK1O15050 2925 aa9.18□□□□□ -0.94
AFF4-201ENST00000265343 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
AFF4-201ENST00000265343 A0A087X002 238 aa9.17□□□□□ -0.94
AFF4-201ENST00000265343 CASC10Q5T4H9 136 aa9.16□□□□□ -0.94
AFF4-201ENST00000265343 LAMA2P24043 3122 aaKnown RBP9.15□□□□□ -0.94
AFF4-201ENST00000265343 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.95
AFF4-201ENST00000265343 DSPP15924 2871 aaKnown RBP9.14□□□□□ -0.95
AFF4-201ENST00000265343 LRBAP50851 2863 aa9.14□□□□□ -0.95
AFF4-201ENST00000265343 PLAC8Q9NZF1 115 aa9.12□□□□□ -0.95
AFF4-201ENST00000265343 A6NN06 94 aa9.12□□□□□ -0.95
AFF4-201ENST00000265343 UTRNP46939 3433 aa9.1□□□□□ -0.95
AFF4-201ENST00000265343 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
AFF4-201ENST00000265343 KRTAP25-1Q3LHN0 102 aa9.09□□□□□ -0.95
AFF4-201ENST00000265343 KRTAP26-1Q6PEX3 210 aa9.04□□□□□ -0.96
AFF4-201ENST00000265343 FRYQ5TBA9 3013 aa9.02□□□□□ -0.97
AFF4-201ENST00000265343 MGAQ8IWI9 3026 aa9.02□□□□□ -0.97
AFF4-201ENST00000265343 Q8NDZ9 215 aa9.01□□□□□ -0.97
AFF4-201ENST00000265343 M0R2T5 61 aa9.01□□□□□ -0.97
AFF4-201ENST00000265343 KRTAP10-3P60369 221 aa8.99□□□□□ -0.97
AFF4-201ENST00000265343 M0QZ58 72 aa8.98□□□□□ -0.97
AFF4-201ENST00000265343 FRYLO94915 3013 aa8.98□□□□□ -0.97
AFF4-201ENST00000265343 PANO1I0J062 215 aa8.97□□□□□ -0.97
AFF4-201ENST00000265343 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
AFF4-201ENST00000265343 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.98
AFF4-201ENST00000265343 LCE6AA0A183 80 aa8.94□□□□□ -0.98
AFF4-201ENST00000265343 PLAC4Q8WY50 150 aa8.92□□□□□ -0.98
AFF4-201ENST00000265343 VPS13AQ96RL7 3174 aa8.9□□□□□ -0.98
AFF4-201ENST00000265343 KALRNO60229 2985 aa8.9□□□□□ -0.98
AFF4-201ENST00000265343 CHD9Q3L8U1 2897 aa8.89□□□□□ -0.99
AFF4-201ENST00000265343 NDUFAF8A1L188 74 aa8.87□□□□□ -0.99
AFF4-201ENST00000265343 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
AFF4-201ENST00000265343 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
AFF4-201ENST00000265343 CHD7Q9P2D1 2997 aa8.83□□□□□ -1
AFF4-201ENST00000265343 ASH1LQ9NR48 2969 aaKnown RBP8.82□□□□□ -1
AFF4-201ENST00000265343 TRIOO75962 3097 aa8.79□□□□□ -1
AFF4-201ENST00000265343 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
AFF4-201ENST00000265343 FLNCQ14315 2725 aa8.76□□□□□ -1.01
AFF4-201ENST00000265343 TACC2O95359 2948 aa8.76□□□□□ -1.01
AFF4-201ENST00000265343 KRTAP1-3Q8IUG1 177 aa8.76□□□□□ -1.01
AFF4-201ENST00000265343 C20orf166-AS1Q96NR2 134 aa8.74□□□□□ -1.01
AFF4-201ENST00000265343 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.01
AFF4-201ENST00000265343 KRTAP1-1Q07627 177 aa8.72□□□□□ -1.01
AFF4-201ENST00000265343 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
AFF4-201ENST00000265343 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
AFF4-201ENST00000265343 NF1P21359 2839 aa8.69□□□□□ -1.02
AFF4-201ENST00000265343 PP632Q6XCG6 107 aa8.66□□□□□ -1.02
AFF4-201ENST00000265343 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
AFF4-201ENST00000265343 TENM3Q9P273 2699 aa8.63□□□□□ -1.03
AFF4-201ENST00000265343 CELSR2Q9HCU4 2923 aa8.62□□□□□ -1.03
AFF4-201ENST00000265343 FREM2Q5SZK8 3169 aa8.62□□□□□ -1.03
AFF4-201ENST00000265343 A8MUU9 505 aa8.62□□□□□ -1.03
AFF4-201ENST00000265343 PRUNE2Q8WUY3 3088 aa8.61□□□□□ -1.03
AFF4-201ENST00000265343 KRTAP11-1Q8IUC1 163 aa8.61□□□□□ -1.03
AFF4-201ENST00000265343 WDFY4Q6ZS81 3184 aa8.59□□□□□ -1.03
AFF4-201ENST00000265343 COL12A1Q99715 3063 aa8.59□□□□□ -1.03
AFF4-201ENST00000265343 TGP01266 2768 aa8.58□□□□□ -1.04
AFF4-201ENST00000265343 NOTCH2NLQ7Z3S9 236 aa8.58□□□□□ -1.04
AFF4-201ENST00000265343 KRTAP1-5Q9BYS1 174 aa8.57□□□□□ -1.04
AFF4-201ENST00000265343 A8MU10 97 aa8.54□□□□□ -1.04
AFF4-201ENST00000265343 PDZD2O15018 2839 aa8.54□□□□□ -1.04
AFF4-201ENST00000265343 TNP1P09430 55 aa8.52□□□□□ -1.04
AFF4-201ENST00000265343 Q5VSD8 79 aa8.52□□□□□ -1.05
AFF4-201ENST00000265343 RANBP2P49792 3224 aaKnown RBP8.51□□□□□ -1.05
AFF4-201ENST00000265343 DMXL2Q8TDJ6 3036 aa8.51□□□□□ -1.05
AFF4-201ENST00000265343 CRYBG3Q68DQ2 2970 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms