RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
TUBGCP3-201ENST00000261965 PHF5AQ7RTV0 110 aaKnown RBP9.06□□□□□ -0.96
TUBGCP3-201ENST00000261965 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
TUBGCP3-201ENST00000261965 TENM2Q9NT68 2774 aa9.05□□□□□ -0.96
TUBGCP3-201ENST00000261965 CSMD3Q7Z407 3707 aa9.04□□□□□ -0.96
TUBGCP3-201ENST00000261965 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
TUBGCP3-201ENST00000261965 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
TUBGCP3-201ENST00000261965 B9D2Q9BPU9 175 aa9.04□□□□□ -0.96
TUBGCP3-201ENST00000261965 LINC00588Q9Y4M8 146 aa9.04□□□□□ -0.96
TUBGCP3-201ENST00000261965 SEC61GP60059 68 aa9.03□□□□□ -0.96
TUBGCP3-201ENST00000261965 LINC01556Q5JQF7 62 aa9.03□□□□□ -0.96
TUBGCP3-201ENST00000261965 EPM2AB3EWF7 344 aa9.02□□□□□ -0.97
TUBGCP3-201ENST00000261965 BCE1O60756 84 aa9.01□□□□□ -0.97
TUBGCP3-201ENST00000261965 KRTAP24-1Q3LI83 254 aa9.01□□□□□ -0.97
TUBGCP3-201ENST00000261965 KCNQ1DNQ9H478 68 aa9□□□□□ -0.97
TUBGCP3-201ENST00000261965 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
TUBGCP3-201ENST00000261965 IGFL1Q6UW32 110 aa9□□□□□ -0.97
TUBGCP3-201ENST00000261965 TRAV22A0A0B4J277 110 aa8.99□□□□□ -0.97
TUBGCP3-201ENST00000261965 IGLV1-50A0A075B6I6 118 aa8.99□□□□□ -0.97
TUBGCP3-201ENST00000261965 ANAPC11Q9NYG5 84 aa8.98□□□□□ -0.97
TUBGCP3-201ENST00000261965 DSCR10P59022 87 aa8.96□□□□□ -0.97
TUBGCP3-201ENST00000261965 H3BNG1 76 aa8.93□□□□□ -0.98
TUBGCP3-201ENST00000261965 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
TUBGCP3-201ENST00000261965 DNAH10OSP0CZ25 163 aa8.92□□□□□ -0.98
TUBGCP3-201ENST00000261965 CIRBP-AS1Q8TBR5 109 aa8.92□□□□□ -0.98
TUBGCP3-201ENST00000261965 hDV103S1A0JD37 113 aa8.91□□□□□ -0.98
TUBGCP3-201ENST00000261965 WIPF1O43516 503 aa8.89□□□□□ -0.99
TUBGCP3-201ENST00000261965 KRTAP7-1Q8IUC3 87 aa8.89□□□□□ -0.99
TUBGCP3-201ENST00000261965 A8MU10 97 aa8.88□□□□□ -0.99
TUBGCP3-201ENST00000261965 IGLV5-48A0A075B6I7 105 aa8.88□□□□□ -0.99
TUBGCP3-201ENST00000261965 MOBPQ13875 183 aa8.87□□□□□ -0.99
TUBGCP3-201ENST00000261965 SPINK1P00995 79 aa8.85□□□□□ -0.99
TUBGCP3-201ENST00000261965 COL7A1Q02388 2944 aa8.85□□□□□ -0.99
TUBGCP3-201ENST00000261965 ANK2Q01484 3957 aa8.85□□□□□ -0.99
TUBGCP3-201ENST00000261965 IGLV8-61A0A075B6I0 122 aa8.84□□□□□ -0.99
TUBGCP3-201ENST00000261965 COA5Q86WW8 74 aa8.83□□□□□ -1
TUBGCP3-201ENST00000261965 PRR15Q8IV56 129 aa8.83□□□□□ -1
TUBGCP3-201ENST00000261965 KRTAP1-5Q9BYS1 174 aa8.81□□□□□ -1
TUBGCP3-201ENST00000261965 K7EIL1 84 aa8.8□□□□□ -1
TUBGCP3-201ENST00000261965 KRTAP4-16G5E9R7 235 aaPredicted RBP8.79□□□□□ -1
TUBGCP3-201ENST00000261965 C14orf177Q52M58 125 aa8.79□□□□□ -1
TUBGCP3-201ENST00000261965 C16orf90A8MZG2 172 aa8.78□□□□□ -1
TUBGCP3-201ENST00000261965 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
TUBGCP3-201ENST00000261965 A8MWP4 228 aa8.77□□□□□ -1.01
TUBGCP3-201ENST00000261965 LIMD2Q9BT23 127 aa8.77□□□□□ -1.01
TUBGCP3-201ENST00000261965 F8WDY8 70 aa8.76□□□□□ -1.01
TUBGCP3-201ENST00000261965 SPRR1AP35321 89 aa8.76□□□□□ -1.01
TUBGCP3-201ENST00000261965 PRR26Q8N8Z3 221 aa8.75□□□□□ -1.01
TUBGCP3-201ENST00000261965 TNP2Q05952 138 aa8.75□□□□□ -1.01
TUBGCP3-201ENST00000261965 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
TUBGCP3-201ENST00000261965 IGKV2D-30A0A075B6S6 120 aa8.73□□□□□ -1.01
TUBGCP3-201ENST00000261965 IGKV2-30P06310 120 aa8.73□□□□□ -1.01
TUBGCP3-201ENST00000261965 SPRR4Q96PI1 79 aa8.73□□□□□ -1.01
TUBGCP3-201ENST00000261965 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
TUBGCP3-201ENST00000261965 MDFIQ99750 246 aa8.71□□□□□ -1.02
TUBGCP3-201ENST00000261965 FLG2Q5D862 2391 aaPredicted RBP8.7□□□□□ -1.02
TUBGCP3-201ENST00000261965 LY6G6CO95867 125 aa8.7□□□□□ -1.02
TUBGCP3-201ENST00000261965 CNBPP62633 177 aaKnown RBP8.7□□□□□ -1.02
TUBGCP3-201ENST00000261965 DNAH10Q8IVF4 4471 aa8.7□□□□□ -1.02
TUBGCP3-201ENST00000261965 TGP01266 2768 aa8.7□□□□□ -1.02
TUBGCP3-201ENST00000261965 IGLV5-37A0A075B6J1 123 aa8.69□□□□□ -1.02
TUBGCP3-201ENST00000261965 A0A1B0GW54 56 aa8.68□□□□□ -1.02
TUBGCP3-201ENST00000261965 Q1T7F1 81 aa8.67□□□□□ -1.02
TUBGCP3-201ENST00000261965 PANO1I0J062 215 aa8.66□□□□□ -1.02
TUBGCP3-201ENST00000261965 Q5VV11 94 aa8.66□□□□□ -1.02
TUBGCP3-201ENST00000261965 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
TUBGCP3-201ENST00000261965 C8orf17Q9NRJ1 99 aa8.64□□□□□ -1.03
TUBGCP3-201ENST00000261965 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
TUBGCP3-201ENST00000261965 C4orf48Q5BLP8 95 aa8.63□□□□□ -1.03
TUBGCP3-201ENST00000261965 SPACA4Q8TDM5 124 aa8.63□□□□□ -1.03
TUBGCP3-201ENST00000261965 LYSTQ99698 3801 aa8.63□□□□□ -1.03
TUBGCP3-201ENST00000261965 IGLV5-52A0A0A0MRZ9 124 aa8.61□□□□□ -1.03
TUBGCP3-201ENST00000261965 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
TUBGCP3-201ENST00000261965 MRPL34Q9BQ48 92 aaKnown RBP8.6□□□□□ -1.03
TUBGCP3-201ENST00000261965 PRAC1Q96KF2 57 aa8.59□□□□□ -1.03
TUBGCP3-201ENST00000261965 A0A1B0GU69 56 aa8.59□□□□□ -1.03
TUBGCP3-201ENST00000261965 CD164Q04900 197 aa8.59□□□□□ -1.03
TUBGCP3-201ENST00000261965 NBDYA0A0U1RRE5 68 aa8.58□□□□□ -1.04
TUBGCP3-201ENST00000261965 ZNF706Q9Y5V0 76 aaPredicted RBP8.58□□□□□ -1.04
TUBGCP3-201ENST00000261965 CYP4F30PQ9H0H9 118 aa8.57□□□□□ -1.04
TUBGCP3-201ENST00000261965 HUWE1Q7Z6Z7 4374 aaKnown RBP8.56□□□□□ -1.04
TUBGCP3-201ENST00000261965 SPINK7P58062 85 aa8.56□□□□□ -1.04
TUBGCP3-201ENST00000261965 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
TUBGCP3-201ENST00000261965 MMP24-AS1A0A0U1RRL7 71 aa8.56□□□□□ -1.04
TUBGCP3-201ENST00000261965 TP53AIP1Q9HCN2 124 aa8.56□□□□□ -1.04
TUBGCP3-201ENST00000261965 PSORS1C2Q9UIG4 136 aa8.56□□□□□ -1.04
TUBGCP3-201ENST00000261965 ATP11AUNQ6ZP68 121 aa8.55□□□□□ -1.04
TUBGCP3-201ENST00000261965 APLNQ9ULZ1 77 aa8.55□□□□□ -1.04
TUBGCP3-201ENST00000261965 A0A1B0GVX0 72 aa8.55□□□□□ -1.04
TUBGCP3-201ENST00000261965 ZCCHC13Q8WW36 166 aaKnown RBP8.55□□□□□ -1.04
TUBGCP3-201ENST00000261965 RTL8CO15255 209 aa8.54□□□□□ -1.04
TUBGCP3-201ENST00000261965 H3BPC8 53 aa8.54□□□□□ -1.04
TUBGCP3-201ENST00000261965 A0A087X002 238 aa8.54□□□□□ -1.04
TUBGCP3-201ENST00000261965 NOTCH2NLQ7Z3S9 236 aa8.54□□□□□ -1.04
TUBGCP3-201ENST00000261965 KTN1-AS1Q86SY8 53 aa8.53□□□□□ -1.04
TUBGCP3-201ENST00000261965 LINC00472Q9H8W2 130 aa8.53□□□□□ -1.04
TUBGCP3-201ENST00000261965 RBM12B-AS1Q9P1G2 102 aa8.53□□□□□ -1.04
TUBGCP3-201ENST00000261965 LCA10Q71F78 164 aa8.51□□□□□ -1.05
TUBGCP3-201ENST00000261965 ACYP2P14621 99 aa8.5□□□□□ -1.05
TUBGCP3-201ENST00000261965 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms