RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PRLHP81277 87 aa13.61□□□□□ -0.23
SH2D3A-201ENST00000245908 C14orf177Q52M58 125 aa13.6□□□□□ -0.23
SH2D3A-201ENST00000245908 DSCR10P59022 87 aa13.59□□□□□ -0.23
SH2D3A-201ENST00000245908 LYSTQ99698 3801 aa13.59□□□□□ -0.23
SH2D3A-201ENST00000245908 IGFL1Q6UW32 110 aa13.58□□□□□ -0.24
SH2D3A-201ENST00000245908 IGLV8-61A0A075B6I0 122 aa13.57□□□□□ -0.24
SH2D3A-201ENST00000245908 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.57□□□□□ -0.24
SH2D3A-201ENST00000245908 DNAH9Q9NYC9 4486 aa13.57□□□□□ -0.24
SH2D3A-201ENST00000245908 Q1T7F1 81 aa13.56□□□□□ -0.24
SH2D3A-201ENST00000245908 PRR15Q8IV56 129 aa13.56□□□□□ -0.24
SH2D3A-201ENST00000245908 SEC61GP60059 68 aa13.55□□□□□ -0.24
SH2D3A-201ENST00000245908 COL7A1Q02388 2944 aa13.55□□□□□ -0.24
SH2D3A-201ENST00000245908 STAB2Q8WWQ8 2551 aa13.54□□□□□ -0.24
SH2D3A-201ENST00000245908 DYNC2H1Q8NCM8 4307 aaKnown RBP13.54□□□□□ -0.24
SH2D3A-201ENST00000245908 MGAM2Q2M2H8 2515 aa13.54□□□□□ -0.24
SH2D3A-201ENST00000245908 FAM30AQ9NZY2 134 aa13.53□□□□□ -0.24
SH2D3A-201ENST00000245908 A0A0G2JQZ4 141 aa13.52□□□□□ -0.24
SH2D3A-201ENST00000245908 K7EQZ3 153 aa13.52□□□□□ -0.24
SH2D3A-201ENST00000245908 CHTF8P0CG12 524 aa13.52□□□□□ -0.24
SH2D3A-201ENST00000245908 PHF5AQ7RTV0 110 aaKnown RBP13.52□□□□□ -0.24
SH2D3A-201ENST00000245908 KRTAP11-1Q8IUC1 163 aa13.52□□□□□ -0.25
SH2D3A-201ENST00000245908 ZCCHC13Q8WW36 166 aaKnown RBP13.52□□□□□ -0.25
SH2D3A-201ENST00000245908 H0Y9J4 135 aa13.5□□□□□ -0.25
SH2D3A-201ENST00000245908 C9orf163Q8N9P6 203 aa13.49□□□□□ -0.25
SH2D3A-201ENST00000245908 C1orf64Q8NEQ6 169 aa13.49□□□□□ -0.25
SH2D3A-201ENST00000245908 B9D2Q9BPU9 175 aa13.48□□□□□ -0.25
SH2D3A-201ENST00000245908 LRCOL1A6NCL2 159 aa13.48□□□□□ -0.25
SH2D3A-201ENST00000245908 UBE2AP49459 152 aa13.48□□□□□ -0.25
SH2D3A-201ENST00000245908 SPRR1BP22528 89 aa13.47□□□□□ -0.25
SH2D3A-201ENST00000245908 A0A087WSZ3 146 aa13.44□□□□□ -0.26
SH2D3A-201ENST00000245908 NBDYA0A0U1RRE5 68 aa13.44□□□□□ -0.26
SH2D3A-201ENST00000245908 CYP4F30PQ9H0H9 118 aa13.43□□□□□ -0.26
SH2D3A-201ENST00000245908 HCG22E2RYF7 251 aa13.43□□□□□ -0.26
SH2D3A-201ENST00000245908 DNAH7Q8WXX0 4024 aa13.41□□□□□ -0.26
SH2D3A-201ENST00000245908 Q6ZRN7 208 aaPredicted RBP13.4□□□□□ -0.26
SH2D3A-201ENST00000245908 CSMD3Q7Z407 3707 aa13.39□□□□□ -0.27
SH2D3A-201ENST00000245908 PMAIP1Q13794 54 aa13.39□□□□□ -0.27
SH2D3A-201ENST00000245908 DEFB116Q30KQ4 102 aa13.38□□□□□ -0.27
SH2D3A-201ENST00000245908 NUPR2A6NF83 97 aa13.38□□□□□ -0.27
SH2D3A-201ENST00000245908 MDFIQ99750 246 aa13.37□□□□□ -0.27
SH2D3A-201ENST00000245908 PLECQ15149 4684 aaKnown RBP13.36□□□□□ -0.27
SH2D3A-201ENST00000245908 TRAV22A0A0B4J277 110 aa13.36□□□□□ -0.27
SH2D3A-201ENST00000245908 PANO1I0J062 215 aa13.35□□□□□ -0.27
SH2D3A-201ENST00000245908 KRTAP13-1Q8IUC0 172 aa13.33□□□□□ -0.28
SH2D3A-201ENST00000245908 NDUFB1O75438 58 aa13.33□□□□□ -0.28
SH2D3A-201ENST00000245908 PSPHP1O15172 72 aa13.32□□□□□ -0.28
SH2D3A-201ENST00000245908 TENM2Q9NT68 2774 aa13.29□□□□□ -0.28
SH2D3A-201ENST00000245908 RPL37AP61513 92 aaKnown RBP13.29□□□□□ -0.28
SH2D3A-201ENST00000245908 WFDC13Q8IUB5 93 aa13.29□□□□□ -0.28
SH2D3A-201ENST00000245908 SPACA4Q8TDM5 124 aa13.27□□□□□ -0.28
SH2D3A-201ENST00000245908 LINC00472Q9H8W2 130 aa13.27□□□□□ -0.28
SH2D3A-201ENST00000245908 KRTAP29-1A8MX34 341 aaPredicted RBP13.27□□□□□ -0.29
SH2D3A-201ENST00000245908 SRRM2Q9UQ35 2752 aaKnown RBP13.26□□□□□ -0.29
SH2D3A-201ENST00000245908 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.25□□□□□ -0.29
SH2D3A-201ENST00000245908 A8MWP4 228 aa13.23□□□□□ -0.29
SH2D3A-201ENST00000245908 PRR4Q16378 134 aa13.23□□□□□ -0.29
SH2D3A-201ENST00000245908 A8MUN3 132 aa13.2□□□□□ -0.3
SH2D3A-201ENST00000245908 MP68P56378 58 aa13.2□□□□□ -0.3
SH2D3A-201ENST00000245908 A0A087WTM6 91 aa13.19□□□□□ -0.3
SH2D3A-201ENST00000245908 CASC2Q6XLA1 102 aa13.19□□□□□ -0.3
SH2D3A-201ENST00000245908 VPS13DQ5THJ4 4388 aa13.19□□□□□ -0.3
SH2D3A-201ENST00000245908 Q5VV11 94 aa13.17□□□□□ -0.3
SH2D3A-201ENST00000245908 STARD9Q9P2P6 4700 aa13.17□□□□□ -0.3
SH2D3A-201ENST00000245908 SPANXA2-OT1Q8N9U9 137 aa13.16□□□□□ -0.3
SH2D3A-201ENST00000245908 LINC00483Q53H64 154 aa13.14□□□□□ -0.31
SH2D3A-201ENST00000245908 IGLV9-49A0A0B4J1Y8 123 aa13.11□□□□□ -0.31
SH2D3A-201ENST00000245908 H3BPC8 53 aa13.11□□□□□ -0.31
SH2D3A-201ENST00000245908 LIMD2Q9BT23 127 aa13.11□□□□□ -0.31
SH2D3A-201ENST00000245908 RTL8CO15255 209 aa13.1□□□□□ -0.31
SH2D3A-201ENST00000245908 CD164Q04900 197 aa13.1□□□□□ -0.31
SH2D3A-201ENST00000245908 LINC00208Q96KT6 92 aa13.1□□□□□ -0.31
SH2D3A-201ENST00000245908 HECTD4Q9Y4D8 3996 aa13.09□□□□□ -0.31
SH2D3A-201ENST00000245908 MMP24-AS1A0A0U1RRL7 71 aa13.09□□□□□ -0.31
SH2D3A-201ENST00000245908 Q8N9P0 234 aaPredicted RBP13.09□□□□□ -0.31
SH2D3A-201ENST00000245908 ZNF706Q9Y5V0 76 aaPredicted RBP13.08□□□□□ -0.32
SH2D3A-201ENST00000245908 H0Y9P7 68 aa13.08□□□□□ -0.32
SH2D3A-201ENST00000245908 Q96NJ1 140 aa13.08□□□□□ -0.32
SH2D3A-201ENST00000245908 Q6ZR54 194 aa13.07□□□□□ -0.32
SH2D3A-201ENST00000245908 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
SH2D3A-201ENST00000245908 IGLV5-52A0A0A0MRZ9 124 aa13.06□□□□□ -0.32
SH2D3A-201ENST00000245908 PSORS1C2Q9UIG4 136 aa13.06□□□□□ -0.32
SH2D3A-201ENST00000245908 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
SH2D3A-201ENST00000245908 A8MU10 97 aa13.04□□□□□ -0.32
SH2D3A-201ENST00000245908 WWC2-AS2Q96NR7 200 aa13.04□□□□□ -0.32
SH2D3A-201ENST00000245908 CHKB-CPT1BH3BT56 60 aa13.03□□□□□ -0.32
SH2D3A-201ENST00000245908 MOBPQ13875 183 aa13□□□□□ -0.33
SH2D3A-201ENST00000245908 DNAH17Q9UFH2 4485 aa13□□□□□ -0.33
SH2D3A-201ENST00000245908 ZNF861PO60384 105 aa12.99□□□□□ -0.33
SH2D3A-201ENST00000245908 ASB16-AS1Q495Z4 193 aa12.99□□□□□ -0.33
SH2D3A-201ENST00000245908 PRR15LQ9BU68 103 aa12.99□□□□□ -0.33
SH2D3A-201ENST00000245908 Q75L30 129 aa12.97□□□□□ -0.33
SH2D3A-201ENST00000245908 KTN1-AS1Q86SY8 53 aa12.97□□□□□ -0.33
SH2D3A-201ENST00000245908 DNAH2Q9P225 4427 aa12.95□□□□□ -0.34
SH2D3A-201ENST00000245908 LOC101927531A0A1B0GV80 90 aa12.94□□□□□ -0.34
SH2D3A-201ENST00000245908 ATP11AUNQ6ZP68 121 aa12.93□□□□□ -0.34
SH2D3A-201ENST00000245908 KMT2AQ03164 3969 aa12.93□□□□□ -0.34
SH2D3A-201ENST00000245908 C8orf17Q9NRJ1 99 aa12.93□□□□□ -0.34
SH2D3A-201ENST00000245908 ANAPC11Q9NYG5 84 aa12.92□□□□□ -0.34
SH2D3A-201ENST00000245908 DNAH8Q96JB1 4490 aa12.91□□□□□ -0.34
SH2D3A-201ENST00000245908 C1orf134Q5TEV5 83 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms