RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 A0A1B0GV72 72 aa10.76□□□□□ -0.69
HOXC6-201ENST00000243108 CCKP06307 115 aa10.76□□□□□ -0.69
HOXC6-201ENST00000243108 DPH3Q96FX2 82 aa10.76□□□□□ -0.69
HOXC6-201ENST00000243108 Q9BRP9 147 aa10.76□□□□□ -0.69
HOXC6-201ENST00000243108 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
HOXC6-201ENST00000243108 LAMTOR3Q9UHA4 124 aa10.75□□□□□ -0.69
HOXC6-201ENST00000243108 RBM3P98179 157 aaKnown RBP10.75□□□□□ -0.69
HOXC6-201ENST00000243108 LOC110117498A0A087WWA1 95 aa10.73□□□□□ -0.69
HOXC6-201ENST00000243108 SCGB1A1P11684 91 aa10.73□□□□□ -0.69
HOXC6-201ENST00000243108 SMCR5Q8TEV8 140 aa10.72□□□□□ -0.69
HOXC6-201ENST00000243108 OXTP01178 125 aa10.71□□□□□ -0.69
HOXC6-201ENST00000243108 NDUFV3P56181 108 aaKnown RBP10.71□□□□□ -0.69
HOXC6-201ENST00000243108 Q6ZQT0 140 aa10.71□□□□□ -0.69
HOXC6-201ENST00000243108 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
HOXC6-201ENST00000243108 PHF5AQ7RTV0 110 aaKnown RBP10.7□□□□□ -0.7
HOXC6-201ENST00000243108 PCP4P48539 62 aa10.7□□□□□ -0.7
HOXC6-201ENST00000243108 HMCN2Q8NDA2 5059 aa10.69□□□□□ -0.7
HOXC6-201ENST00000243108 PDE6GP18545 87 aa10.69□□□□□ -0.7
HOXC6-201ENST00000243108 LINC00643Q86TS7 51 aa10.69□□□□□ -0.7
HOXC6-201ENST00000243108 Q8N377 158 aa10.69□□□□□ -0.7
HOXC6-201ENST00000243108 IGLV5-48A0A075B6I7 105 aa10.68□□□□□ -0.7
HOXC6-201ENST00000243108 TRBV7-4A0A0J9YYF1 115 aa10.68□□□□□ -0.7
HOXC6-201ENST00000243108 DSCR8Q96T75 97 aa10.68□□□□□ -0.7
HOXC6-201ENST00000243108 UBE2BP63146 152 aa10.67□□□□□ -0.7
HOXC6-201ENST00000243108 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
HOXC6-201ENST00000243108 LINC00846Q9NV44 126 aa10.67□□□□□ -0.7
HOXC6-201ENST00000243108 ERC2-IT1O76042 136 aa10.67□□□□□ -0.7
HOXC6-201ENST00000243108 Q6Q795 121 aa10.65□□□□□ -0.7
HOXC6-201ENST00000243108 TNXBP22105 4242 aa10.65□□□□□ -0.7
HOXC6-201ENST00000243108 TRBV7-7A0A0K0K1E9 115 aa10.64□□□□□ -0.71
HOXC6-201ENST00000243108 MT1HL1P0DM35 61 aa10.64□□□□□ -0.71
HOXC6-201ENST00000243108 FAM19A1Q7Z5A9 133 aa10.64□□□□□ -0.71
HOXC6-201ENST00000243108 H0Y9J4 135 aa10.64□□□□□ -0.71
HOXC6-201ENST00000243108 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
HOXC6-201ENST00000243108 DEFB105AQ8NG35 78 aa10.64□□□□□ -0.71
HOXC6-201ENST00000243108 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
HOXC6-201ENST00000243108 PRLHP81277 87 aa10.62□□□□□ -0.71
HOXC6-201ENST00000243108 IMUPQ9GZP8 106 aa10.6□□□□□ -0.71
HOXC6-201ENST00000243108 Q6JHZ5 121 aa10.58□□□□□ -0.72
HOXC6-201ENST00000243108 BCE1O60756 84 aa10.57□□□□□ -0.72
HOXC6-201ENST00000243108 KRTAP13-1Q8IUC0 172 aa10.56□□□□□ -0.72
HOXC6-201ENST00000243108 C3orf22Q8N5N4 141 aa10.56□□□□□ -0.72
HOXC6-201ENST00000243108 HIGD2AQ9BW72 106 aa10.56□□□□□ -0.72
HOXC6-201ENST00000243108 SMIM29Q86T20 159 aa10.55□□□□□ -0.72
HOXC6-201ENST00000243108 UBL5Q9BZL1 73 aa10.55□□□□□ -0.72
HOXC6-201ENST00000243108 UBE2AP49459 152 aa10.53□□□□□ -0.72
HOXC6-201ENST00000243108 ATP5EP2Q5VTU8 51 aa10.52□□□□□ -0.73
HOXC6-201ENST00000243108 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
HOXC6-201ENST00000243108 UBR4Q5T4S7 5183 aa10.51□□□□□ -0.73
HOXC6-201ENST00000243108 SPRR1BP22528 89 aa10.5□□□□□ -0.73
HOXC6-201ENST00000243108 IGKV3D-7A0A0C4DH55 119 aa10.5□□□□□ -0.73
HOXC6-201ENST00000243108 C1orf137Q5JT78 98 aa10.49□□□□□ -0.73
HOXC6-201ENST00000243108 Q6ZVQ6 151 aa10.49□□□□□ -0.73
HOXC6-201ENST00000243108 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
HOXC6-201ENST00000243108 PSORS1C2Q9UIG4 136 aa10.48□□□□□ -0.73
HOXC6-201ENST00000243108 IGLV8-61A0A075B6I0 122 aa10.47□□□□□ -0.73
HOXC6-201ENST00000243108 A0A1B0GW54 56 aa10.47□□□□□ -0.73
HOXC6-201ENST00000243108 A0A1W2PNM2 257 aa10.46□□□□□ -0.74
HOXC6-201ENST00000243108 F8WEM9 126 aa10.46□□□□□ -0.74
HOXC6-201ENST00000243108 Q8NBF4 154 aa10.44□□□□□ -0.74
HOXC6-201ENST00000243108 KRTAP10-8P60410 259 aa10.43□□□□□ -0.74
HOXC6-201ENST00000243108 SPRR4Q96PI1 79 aa10.43□□□□□ -0.74
HOXC6-201ENST00000243108 FAM236AA0A1B0GUQ0 79 aa10.41□□□□□ -0.74
HOXC6-201ENST00000243108 FAM236BA0A1B0GV22 79 aa10.41□□□□□ -0.74
HOXC6-201ENST00000243108 CXCL6P80162 114 aa10.41□□□□□ -0.74
HOXC6-201ENST00000243108 LRP2P98164 4655 aa10.4□□□□□ -0.74
HOXC6-201ENST00000243108 HIST1H4AP62805 103 aaKnown RBP10.4□□□□□ -0.74
HOXC6-201ENST00000243108 IGFL1Q6UW32 110 aa10.4□□□□□ -0.74
HOXC6-201ENST00000243108 ANAPC13Q9BS18 74 aa10.39□□□□□ -0.75
HOXC6-201ENST00000243108 CRYGAP11844 174 aa10.38□□□□□ -0.75
HOXC6-201ENST00000243108 ZNF861PO60384 105 aa10.37□□□□□ -0.75
HOXC6-201ENST00000243108 LINC00483Q53H64 154 aa10.37□□□□□ -0.75
HOXC6-201ENST00000243108 IGLV7-43P04211 117 aa10.36□□□□□ -0.75
HOXC6-201ENST00000243108 NREPQ16612 68 aa10.36□□□□□ -0.75
HOXC6-201ENST00000243108 A0A087WVE0 104 aa10.36□□□□□ -0.75
HOXC6-201ENST00000243108 ZNF706Q9Y5V0 76 aaPredicted RBP10.35□□□□□ -0.75
HOXC6-201ENST00000243108 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
HOXC6-201ENST00000243108 ATOX1O00244 68 aa10.28□□□□□ -0.76
HOXC6-201ENST00000243108 BPY2O14599 106 aa10.27□□□□□ -0.76
HOXC6-201ENST00000243108 KRTAP1-4P0C5Y4 121 aa10.27□□□□□ -0.77
HOXC6-201ENST00000243108 PRR26Q8N8Z3 221 aa10.27□□□□□ -0.77
HOXC6-201ENST00000243108 A0A087WSZ3 146 aa10.24□□□□□ -0.77
HOXC6-201ENST00000243108 LPAP08519 4548 aa10.23□□□□□ -0.77
HOXC6-201ENST00000243108 IGLV9-49A0A0B4J1Y8 123 aa10.23□□□□□ -0.77
HOXC6-201ENST00000243108 IGKV4-1P06312 121 aa10.23□□□□□ -0.77
HOXC6-201ENST00000243108 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.77
HOXC6-201ENST00000243108 Q8N9L7 120 aa10.2□□□□□ -0.78
HOXC6-201ENST00000243108 RNF213Q63HN8 5207 aa10.19□□□□□ -0.78
HOXC6-201ENST00000243108 CCDC179H3BU77 68 aa10.19□□□□□ -0.78
HOXC6-201ENST00000243108 ANAPC11Q9NYG5 84 aa10.19□□□□□ -0.78
HOXC6-201ENST00000243108 DSCR10P59022 87 aa10.18□□□□□ -0.78
HOXC6-201ENST00000243108 MOBPQ13875 183 aa10.17□□□□□ -0.78
HOXC6-201ENST00000243108 COX7CP15954 63 aa10.16□□□□□ -0.78
HOXC6-201ENST00000243108 SERP2Q8N6R1 65 aa10.16□□□□□ -0.78
HOXC6-201ENST00000243108 UQCRQO14949 82 aa10.15□□□□□ -0.78
HOXC6-201ENST00000243108 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
HOXC6-201ENST00000243108 K7EQZ3 153 aa10.1□□□□□ -0.79
HOXC6-201ENST00000243108 SMIM20Q8N5G0 67 aa10.1□□□□□ -0.79
HOXC6-201ENST00000243108 A0A087X002 238 aa10.1□□□□□ -0.79
HOXC6-201ENST00000243108 DEFB116Q30KQ4 102 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms