RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 SPART-AS1P0CW21 52 aa9.74□□□□□ -0.85
HOXC12-201ENST00000243103 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
HOXC12-201ENST00000243103 CMC4P56277 68 aaPredicted RBP9.71□□□□□ -0.85
HOXC12-201ENST00000243103 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
HOXC12-201ENST00000243103 ADM2Q7Z4H4 148 aa9.7□□□□□ -0.86
HOXC12-201ENST00000243103 Q8NBF4 154 aa9.69□□□□□ -0.86
HOXC12-201ENST00000243103 FLG2Q5D862 2391 aaPredicted RBP9.69□□□□□ -0.86
HOXC12-201ENST00000243103 H3BQ85 93 aa9.68□□□□□ -0.86
HOXC12-201ENST00000243103 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
HOXC12-201ENST00000243103 Q9BRP9 147 aa9.68□□□□□ -0.86
HOXC12-201ENST00000243103 COA5Q86WW8 74 aa9.68□□□□□ -0.86
HOXC12-201ENST00000243103 LINC00476Q8WZB0 136 aa9.68□□□□□ -0.86
HOXC12-201ENST00000243103 CASC10Q5T4H9 136 aa9.67□□□□□ -0.86
HOXC12-201ENST00000243103 H3BS24 57 aa9.66□□□□□ -0.86
HOXC12-201ENST00000243103 LELP1Q5T871 98 aa9.66□□□□□ -0.86
HOXC12-201ENST00000243103 SPINK7P58062 85 aa9.65□□□□□ -0.86
HOXC12-201ENST00000243103 ANK2Q01484 3957 aa9.65□□□□□ -0.86
HOXC12-201ENST00000243103 NDUFB1O75438 58 aa9.65□□□□□ -0.86
HOXC12-201ENST00000243103 EGFEM1PQ0D2K5 195 aa9.64□□□□□ -0.87
HOXC12-201ENST00000243103 Q8NAQ8 132 aa9.63□□□□□ -0.87
HOXC12-201ENST00000243103 LIMD2Q9BT23 127 aa9.62□□□□□ -0.87
HOXC12-201ENST00000243103 DEFB131BA0A096LNP1 70 aa9.61□□□□□ -0.87
HOXC12-201ENST00000243103 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
HOXC12-201ENST00000243103 ZCCHC13Q8WW36 166 aaKnown RBP9.6□□□□□ -0.87
HOXC12-201ENST00000243103 Q6ZRX8 168 aa9.6□□□□□ -0.87
HOXC12-201ENST00000243103 TGP01266 2768 aa9.59□□□□□ -0.87
HOXC12-201ENST00000243103 LYRM9A8MSI8 78 aa9.59□□□□□ -0.87
HOXC12-201ENST00000243103 MOBPQ13875 183 aa9.59□□□□□ -0.87
HOXC12-201ENST00000243103 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
HOXC12-201ENST00000243103 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
HOXC12-201ENST00000243103 IGFL1Q6UW32 110 aa9.58□□□□□ -0.88
HOXC12-201ENST00000243103 ATP11AUNQ6ZP68 121 aa9.58□□□□□ -0.88
HOXC12-201ENST00000243103 KRTAP10-11P60412 298 aa9.57□□□□□ -0.88
HOXC12-201ENST00000243103 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
HOXC12-201ENST00000243103 PRR34Q9NV39 138 aa9.56□□□□□ -0.88
HOXC12-201ENST00000243103 IGLV8-61A0A075B6I0 122 aa9.56□□□□□ -0.88
HOXC12-201ENST00000243103 IGLV5-48A0A075B6I7 105 aa9.56□□□□□ -0.88
HOXC12-201ENST00000243103 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
HOXC12-201ENST00000243103 LOC101927531A0A1B0GV80 90 aa9.55□□□□□ -0.88
HOXC12-201ENST00000243103 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
HOXC12-201ENST00000243103 DHRS4-AS1Q9P1J3 65 aa9.55□□□□□ -0.88
HOXC12-201ENST00000243103 C7orf65Q6ZTY9 151 aa9.54□□□□□ -0.88
HOXC12-201ENST00000243103 CYP4F30PQ9H0H9 118 aa9.54□□□□□ -0.88
HOXC12-201ENST00000243103 LYSTQ99698 3801 aa9.54□□□□□ -0.88
HOXC12-201ENST00000243103 LINC00313P59037 77 aa9.53□□□□□ -0.88
HOXC12-201ENST00000243103 IGLV9-49A0A0B4J1Y8 123 aa9.52□□□□□ -0.89
HOXC12-201ENST00000243103 SPINK6Q6UWN8 80 aa9.51□□□□□ -0.89
HOXC12-201ENST00000243103 KCNQ1DNQ9H478 68 aa9.5□□□□□ -0.89
HOXC12-201ENST00000243103 IGHV6-1A0A0B4J1U7 121 aa9.49□□□□□ -0.89
HOXC12-201ENST00000243103 A6NN06 94 aa9.49□□□□□ -0.89
HOXC12-201ENST00000243103 CHTF8P0CG12 524 aa9.47□□□□□ -0.89
HOXC12-201ENST00000243103 CDC42SE1Q9NRR8 79 aa9.46□□□□□ -0.89
HOXC12-201ENST00000243103 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
HOXC12-201ENST00000243103 CNBPP62633 177 aaKnown RBP9.44□□□□□ -0.9
HOXC12-201ENST00000243103 IGLV1-50A0A075B6I6 118 aa9.44□□□□□ -0.9
HOXC12-201ENST00000243103 K7EIL1 84 aa9.44□□□□□ -0.9
HOXC12-201ENST00000243103 KRTAP24-1Q3LI83 254 aa9.43□□□□□ -0.9
HOXC12-201ENST00000243103 Q75L30 129 aa9.43□□□□□ -0.9
HOXC12-201ENST00000243103 LCE6AA0A183 80 aa9.41□□□□□ -0.9
HOXC12-201ENST00000243103 SPRR4Q96PI1 79 aa9.4□□□□□ -0.9
HOXC12-201ENST00000243103 DNAH10Q8IVF4 4471 aa9.4□□□□□ -0.91
HOXC12-201ENST00000243103 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
HOXC12-201ENST00000243103 KRTAP26-1Q6PEX3 210 aa9.39□□□□□ -0.91
HOXC12-201ENST00000243103 TNP2Q05952 138 aa9.38□□□□□ -0.91
HOXC12-201ENST00000243103 ANAPC11Q9NYG5 84 aa9.38□□□□□ -0.91
HOXC12-201ENST00000243103 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
HOXC12-201ENST00000243103 CDK2AP2O75956 126 aa9.36□□□□□ -0.91
HOXC12-201ENST00000243103 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
HOXC12-201ENST00000243103 HRES1P13985 223 aa9.34□□□□□ -0.91
HOXC12-201ENST00000243103 SPINK1P00995 79 aa9.32□□□□□ -0.92
HOXC12-201ENST00000243103 A8MWP4 228 aa9.31□□□□□ -0.92
HOXC12-201ENST00000243103 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
HOXC12-201ENST00000243103 DNAH10OSP0CZ25 163 aa9.3□□□□□ -0.92
HOXC12-201ENST00000243103 KRTAP4-16G5E9R7 235 aaPredicted RBP9.3□□□□□ -0.92
HOXC12-201ENST00000243103 FBN3Q75N90 2809 aa9.29□□□□□ -0.92
HOXC12-201ENST00000243103 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
HOXC12-201ENST00000243103 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
HOXC12-201ENST00000243103 SPANXA2-OT1Q8N9U9 137 aa9.29□□□□□ -0.92
HOXC12-201ENST00000243103 C9orf163Q8N9P6 203 aa9.28□□□□□ -0.92
HOXC12-201ENST00000243103 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
HOXC12-201ENST00000243103 IGLV7-46A0A075B6I9 117 aa9.28□□□□□ -0.92
HOXC12-201ENST00000243103 A0A1B0GW54 56 aa9.26□□□□□ -0.93
HOXC12-201ENST00000243103 A0A087X002 238 aa9.26□□□□□ -0.93
HOXC12-201ENST00000243103 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
HOXC12-201ENST00000243103 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
HOXC12-201ENST00000243103 KRTAP1-5Q9BYS1 174 aa9.24□□□□□ -0.93
HOXC12-201ENST00000243103 MMP24-AS1A0A0U1RRL7 71 aa9.24□□□□□ -0.93
HOXC12-201ENST00000243103 LINC01558Q9Y6Z2 57 aa9.24□□□□□ -0.93
HOXC12-201ENST00000243103 A0A1B0GU69 56 aa9.23□□□□□ -0.93
HOXC12-201ENST00000243103 SPRR1AP35321 89 aa9.22□□□□□ -0.93
HOXC12-201ENST00000243103 LINC01556Q5JQF7 62 aa9.2□□□□□ -0.94
HOXC12-201ENST00000243103 RTL8CO15255 209 aa9.2□□□□□ -0.94
HOXC12-201ENST00000243103 IGLV5-37A0A075B6J1 123 aa9.18□□□□□ -0.94
HOXC12-201ENST00000243103 ZNF706Q9Y5V0 76 aaPredicted RBP9.18□□□□□ -0.94
HOXC12-201ENST00000243103 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
HOXC12-201ENST00000243103 C8orf17Q9NRJ1 99 aa9.16□□□□□ -0.94
HOXC12-201ENST00000243103 H3BPC8 53 aa9.15□□□□□ -0.95
HOXC12-201ENST00000243103 PANO1I0J062 215 aa9.13□□□□□ -0.95
HOXC12-201ENST00000243103 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
HOXC12-201ENST00000243103 Q5W150 140 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms