RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 SPINK7P58062 85 aa6□□□□□ -1.45
NUDCD1-201ENST00000239690 C9orf163Q8N9P6 203 aa6□□□□□ -1.45
NUDCD1-201ENST00000239690 BOD1L1Q8NFC6 3051 aa6□□□□□ -1.45
NUDCD1-201ENST00000239690 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
NUDCD1-201ENST00000239690 TNRC18O15417 2968 aaPredicted RBP5.99□□□□□ -1.45
NUDCD1-201ENST00000239690 MGAM2Q2M2H8 2515 aa5.98□□□□□ -1.45
NUDCD1-201ENST00000239690 LCE6AA0A183 80 aa5.98□□□□□ -1.45
NUDCD1-201ENST00000239690 H3BS24 57 aa5.98□□□□□ -1.45
NUDCD1-201ENST00000239690 HRES1P13985 223 aa5.98□□□□□ -1.45
NUDCD1-201ENST00000239690 LINC00472Q9H8W2 130 aa5.97□□□□□ -1.45
NUDCD1-201ENST00000239690 LRBAP50851 2863 aa5.96□□□□□ -1.46
NUDCD1-201ENST00000239690 ZZEF1O43149 2961 aa5.95□□□□□ -1.46
NUDCD1-201ENST00000239690 NBDYA0A0U1RRE5 68 aa5.95□□□□□ -1.46
NUDCD1-201ENST00000239690 KRTAP1-3Q8IUG1 177 aa5.94□□□□□ -1.46
NUDCD1-201ENST00000239690 HECTD1Q9ULT8 2610 aa5.94□□□□□ -1.46
NUDCD1-201ENST00000239690 KRTAP26-1Q6PEX3 210 aa5.94□□□□□ -1.46
NUDCD1-201ENST00000239690 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
NUDCD1-201ENST00000239690 SPINT4Q6UDR6 99 aa5.94□□□□□ -1.46
NUDCD1-201ENST00000239690 KRTAP29-1A8MX34 341 aaPredicted RBP5.93□□□□□ -1.46
NUDCD1-201ENST00000239690 CFAP46Q8IYW2 2715 aa5.93□□□□□ -1.46
NUDCD1-201ENST00000239690 ZNF861PO60384 105 aa5.93□□□□□ -1.46
NUDCD1-201ENST00000239690 LY6G6CO95867 125 aa5.92□□□□□ -1.46
NUDCD1-201ENST00000239690 RTL8CO15255 209 aa5.92□□□□□ -1.46
NUDCD1-201ENST00000239690 TEX15Q9BXT5 2789 aa5.92□□□□□ -1.46
NUDCD1-201ENST00000239690 KRTAP4-16G5E9R7 235 aaPredicted RBP5.91□□□□□ -1.46
NUDCD1-201ENST00000239690 KRTAP10-11P60412 298 aa5.91□□□□□ -1.46
NUDCD1-201ENST00000239690 C1orf134Q5TEV5 83 aa5.91□□□□□ -1.46
NUDCD1-201ENST00000239690 SPRR1BP22528 89 aa5.91□□□□□ -1.46
NUDCD1-201ENST00000239690 ANAPC11Q9NYG5 84 aa5.91□□□□□ -1.46
NUDCD1-201ENST00000239690 NOTCH1P46531 2555 aa5.91□□□□□ -1.46
NUDCD1-201ENST00000239690 CFAP47Q6ZTR5 3102 aa5.91□□□□□ -1.46
NUDCD1-201ENST00000239690 A6NN06 94 aa5.91□□□□□ -1.46
NUDCD1-201ENST00000239690 COL6A3P12111 3177 aa5.9□□□□□ -1.46
NUDCD1-201ENST00000239690 Q96NJ1 140 aa5.9□□□□□ -1.47
NUDCD1-201ENST00000239690 A8MU10 97 aa5.89□□□□□ -1.47
NUDCD1-201ENST00000239690 DMXL2Q8TDJ6 3036 aa5.89□□□□□ -1.47
NUDCD1-201ENST00000239690 KRTAP1-1Q07627 177 aa5.89□□□□□ -1.47
NUDCD1-201ENST00000239690 HELZ2Q9BYK8 2649 aaKnown RBP5.89□□□□□ -1.47
NUDCD1-201ENST00000239690 MAST4O15021 2626 aa5.88□□□□□ -1.47
NUDCD1-201ENST00000239690 ATMQ13315 3056 aa5.88□□□□□ -1.47
NUDCD1-201ENST00000239690 ASH1LQ9NR48 2969 aaKnown RBP5.88□□□□□ -1.47
NUDCD1-201ENST00000239690 USP34Q70CQ2 3546 aa5.86□□□□□ -1.47
NUDCD1-201ENST00000239690 SETXQ7Z333 2677 aaKnown RBP5.86□□□□□ -1.47
NUDCD1-201ENST00000239690 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
NUDCD1-201ENST00000239690 PSORS1C2Q9UIG4 136 aa5.86□□□□□ -1.47
NUDCD1-201ENST00000239690 NBEAL1Q6ZS30 2694 aa5.85□□□□□ -1.47
NUDCD1-201ENST00000239690 KRTAP24-1Q3LI83 254 aa5.85□□□□□ -1.47
NUDCD1-201ENST00000239690 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
NUDCD1-201ENST00000239690 Q6ZR54 194 aa5.84□□□□□ -1.47
NUDCD1-201ENST00000239690 COL6A5A8TX70 2615 aa5.83□□□□□ -1.48
NUDCD1-201ENST00000239690 BAHCC1Q9P281 2608 aa5.83□□□□□ -1.48
NUDCD1-201ENST00000239690 MYO15AQ9UKN7 3530 aa5.83□□□□□ -1.48
NUDCD1-201ENST00000239690 TYMSOSQ8TAI1 123 aa5.83□□□□□ -1.48
NUDCD1-201ENST00000239690 Q8N1X5 172 aa5.81□□□□□ -1.48
NUDCD1-201ENST00000239690 FLNCQ14315 2725 aa5.81□□□□□ -1.48
NUDCD1-201ENST00000239690 UBR5O95071 2799 aaPredicted RBP5.8□□□□□ -1.48
NUDCD1-201ENST00000239690 IGLV7-43P04211 117 aa5.8□□□□□ -1.48
NUDCD1-201ENST00000239690 A0A087WTM6 91 aa5.79□□□□□ -1.48
NUDCD1-201ENST00000239690 K7EIL1 84 aa5.79□□□□□ -1.48
NUDCD1-201ENST00000239690 Q5W150 140 aa5.79□□□□□ -1.48
NUDCD1-201ENST00000239690 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
NUDCD1-201ENST00000239690 PLA2G1BP04054 148 aaKnown RBP5.78□□□□□ -1.48
NUDCD1-201ENST00000239690 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
NUDCD1-201ENST00000239690 DMXL1Q9Y485 3027 aa5.78□□□□□ -1.48
NUDCD1-201ENST00000239690 TEP1Q99973 2627 aaKnown RBP5.78□□□□□ -1.48
NUDCD1-201ENST00000239690 LOC400499M0QZD8 3231 aa5.77□□□□□ -1.49
NUDCD1-201ENST00000239690 A0A1B0GU33 70 aa5.77□□□□□ -1.49
NUDCD1-201ENST00000239690 COL12A1Q99715 3063 aa5.76□□□□□ -1.49
NUDCD1-201ENST00000239690 UTP20O75691 2785 aaKnown RBP5.75□□□□□ -1.49
NUDCD1-201ENST00000239690 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
NUDCD1-201ENST00000239690 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.75□□□□□ -1.49
NUDCD1-201ENST00000239690 APLNQ9ULZ1 77 aa5.75□□□□□ -1.49
NUDCD1-201ENST00000239690 ZANQ9Y493 2812 aa5.74□□□□□ -1.49
NUDCD1-201ENST00000239690 APCP25054 2843 aa5.74□□□□□ -1.49
NUDCD1-201ENST00000239690 STAB1Q9NY15 2570 aa5.73□□□□□ -1.49
NUDCD1-201ENST00000239690 HRNRQ86YZ3 2850 aaPredicted RBP5.73□□□□□ -1.49
NUDCD1-201ENST00000239690 DMDP11532 3685 aa5.73□□□□□ -1.49
NUDCD1-201ENST00000239690 IGSF10Q6WRI0 2623 aa5.73□□□□□ -1.49
NUDCD1-201ENST00000239690 WWC2-AS2Q96NR7 200 aa5.72□□□□□ -1.49
NUDCD1-201ENST00000239690 MUC3AQ02505 3323 aa5.72□□□□□ -1.49
NUDCD1-201ENST00000239690 ADM2Q7Z4H4 148 aa5.71□□□□□ -1.5
NUDCD1-201ENST00000239690 KRTAP7-1Q8IUC3 87 aa5.7□□□□□ -1.5
NUDCD1-201ENST00000239690 KRTAP1-5Q9BYS1 174 aa5.68□□□□□ -1.5
NUDCD1-201ENST00000239690 WDFY3Q8IZQ1 3526 aa5.68□□□□□ -1.5
NUDCD1-201ENST00000239690 LINC00304Q8N9R0 145 aa5.68□□□□□ -1.5
NUDCD1-201ENST00000239690 A0A0D9SG42 100 aa5.67□□□□□ -1.5
NUDCD1-201ENST00000239690 LINC00483Q53H64 154 aa5.67□□□□□ -1.5
NUDCD1-201ENST00000239690 A0A087X002 238 aa5.66□□□□□ -1.5
NUDCD1-201ENST00000239690 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
NUDCD1-201ENST00000239690 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
NUDCD1-201ENST00000239690 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.5
NUDCD1-201ENST00000239690 CELSR2Q9HCU4 2923 aa5.65□□□□□ -1.51
NUDCD1-201ENST00000239690 PLAC8Q9NZF1 115 aa5.64□□□□□ -1.51
NUDCD1-201ENST00000239690 DCHS1Q96JQ0 3298 aa5.64□□□□□ -1.51
NUDCD1-201ENST00000239690 FBN2P35556 2912 aa5.63□□□□□ -1.51
NUDCD1-201ENST00000239690 NSD1Q96L73 2696 aaPredicted RBP5.63□□□□□ -1.51
NUDCD1-201ENST00000239690 STAB2Q8WWQ8 2551 aa5.63□□□□□ -1.51
NUDCD1-201ENST00000239690 NF1P21359 2839 aa5.62□□□□□ -1.51
NUDCD1-201ENST00000239690 NIPBLQ6KC79 2804 aaeCLIP5.62□□□□□ -1.516e-8■■■■■ 30.6
NUDCD1-201ENST00000239690 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms