RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 CHD6Q8TD26 2715 aa4.61□□□□□ -1.67
MED28-201ENST00000237380 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
MED28-201ENST00000237380 KRTAP1-1Q07627 177 aa4.61□□□□□ -1.67
MED28-201ENST00000237380 TEP1Q99973 2627 aaKnown RBP4.61□□□□□ -1.67
MED28-201ENST00000237380 EIF4EBP3O60516 100 aaPredicted RBP4.61□□□□□ -1.67
MED28-201ENST00000237380 A0A1W2PNM2 257 aa4.59□□□□□ -1.67
MED28-201ENST00000237380 A0A087X002 238 aa4.59□□□□□ -1.68
MED28-201ENST00000237380 SPRR1BP22528 89 aa4.58□□□□□ -1.68
MED28-201ENST00000237380 SPINK7P58062 85 aa4.57□□□□□ -1.68
MED28-201ENST00000237380 Q75L30 129 aa4.57□□□□□ -1.68
MED28-201ENST00000237380 NSD1Q96L73 2696 aaPredicted RBP4.56□□□□□ -1.68
MED28-201ENST00000237380 SETXQ7Z333 2677 aaKnown RBP4.56□□□□□ -1.68
MED28-201ENST00000237380 TRANK1O15050 2925 aa4.56□□□□□ -1.68
MED28-201ENST00000237380 STAB2Q8WWQ8 2551 aa4.56□□□□□ -1.68
MED28-201ENST00000237380 MAP1AP78559 2803 aaPredicted RBP4.55□□□□□ -1.68
MED28-201ENST00000237380 OCR1Q9BZK8 76 aa4.55□□□□□ -1.68
MED28-201ENST00000237380 TEX15Q9BXT5 2789 aa4.55□□□□□ -1.68
MED28-201ENST00000237380 SPRR1AP35321 89 aa4.55□□□□□ -1.68
MED28-201ENST00000237380 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
MED28-201ENST00000237380 H1FX-AS1Q4G0G2 97 aa4.52□□□□□ -1.69
MED28-201ENST00000237380 M0QZ58 72 aa4.52□□□□□ -1.69
MED28-201ENST00000237380 ROMO1P60602 79 aa4.51□□□□□ -1.69
MED28-201ENST00000237380 ITPR2Q14571 2701 aa4.5□□□□□ -1.69
MED28-201ENST00000237380 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
MED28-201ENST00000237380 IGSF10Q6WRI0 2623 aa4.49□□□□□ -1.69
MED28-201ENST00000237380 Q5W150 140 aa4.49□□□□□ -1.69
MED28-201ENST00000237380 FLNCQ14315 2725 aa4.49□□□□□ -1.69
MED28-201ENST00000237380 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
MED28-201ENST00000237380 LINC00472Q9H8W2 130 aa4.46□□□□□ -1.69
MED28-201ENST00000237380 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
MED28-201ENST00000237380 Q8N9P0 234 aaPredicted RBP4.45□□□□□ -1.7
MED28-201ENST00000237380 SRCAPQ6ZRS2 3230 aa4.44□□□□□ -1.7
MED28-201ENST00000237380 UBR5O95071 2799 aaPredicted RBP4.44□□□□□ -1.7
MED28-201ENST00000237380 NIPBLQ6KC79 2804 aaeCLIP4.44□□□□□ -1.7
MED28-201ENST00000237380 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
MED28-201ENST00000237380 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
MED28-201ENST00000237380 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
MED28-201ENST00000237380 PANO1I0J062 215 aa4.41□□□□□ -1.7
MED28-201ENST00000237380 BAHCC1Q9P281 2608 aa4.4□□□□□ -1.7
MED28-201ENST00000237380 CHD9Q3L8U1 2897 aa4.4□□□□□ -1.7
MED28-201ENST00000237380 Q5XG85 94 aa4.4□□□□□ -1.71
MED28-201ENST00000237380 Q6ZR54 194 aa4.39□□□□□ -1.71
MED28-201ENST00000237380 GOLGB1Q14789 3259 aaKnown RBP4.39□□□□□ -1.71
MED28-201ENST00000237380 DNAH12Q6ZR08 3092 aa4.38□□□□□ -1.71
MED28-201ENST00000237380 ITPR1Q14643 2758 aa4.36□□□□□ -1.71
MED28-201ENST00000237380 NBEAL2Q6ZNJ1 2754 aa4.35□□□□□ -1.71
MED28-201ENST00000237380 APCP25054 2843 aa4.35□□□□□ -1.71
MED28-201ENST00000237380 KRTAP10-2P60368 255 aa4.35□□□□□ -1.71
MED28-201ENST00000237380 A8MUU9 505 aa4.35□□□□□ -1.71
MED28-201ENST00000237380 KRTAP26-1Q6PEX3 210 aa4.35□□□□□ -1.71
MED28-201ENST00000237380 TNP1P09430 55 aa4.34□□□□□ -1.71
MED28-201ENST00000237380 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
MED28-201ENST00000237380 C20orf166-AS1Q96NR2 134 aa4.33□□□□□ -1.72
MED28-201ENST00000237380 DSPP15924 2871 aaKnown RBP4.32□□□□□ -1.72
MED28-201ENST00000237380 UTP20O75691 2785 aaKnown RBP4.32□□□□□ -1.72
MED28-201ENST00000237380 NOTCH2NLQ7Z3S9 236 aa4.31□□□□□ -1.72
MED28-201ENST00000237380 CHD7Q9P2D1 2997 aa4.3□□□□□ -1.72
MED28-201ENST00000237380 PCNTO95613 3336 aa4.29□□□□□ -1.72
MED28-201ENST00000237380 Q5VV11 94 aa4.29□□□□□ -1.72
MED28-201ENST00000237380 PP632Q6XCG6 107 aa4.29□□□□□ -1.72
MED28-201ENST00000237380 HIVEP1P15822 2718 aa4.29□□□□□ -1.72
MED28-201ENST00000237380 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
MED28-201ENST00000237380 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
MED28-201ENST00000237380 A0A0C4DFX4 3053 aa4.25□□□□□ -1.73
MED28-201ENST00000237380 FRYLO94915 3013 aa4.24□□□□□ -1.73
MED28-201ENST00000237380 SPATA8Q6RVD6 105 aa4.24□□□□□ -1.73
MED28-201ENST00000237380 LAMA2P24043 3122 aaKnown RBP4.24□□□□□ -1.73
MED28-201ENST00000237380 Q8NDZ9 215 aa4.24□□□□□ -1.73
MED28-201ENST00000237380 CEP350Q5VT06 3117 aa4.23□□□□□ -1.73
MED28-201ENST00000237380 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
MED28-201ENST00000237380 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
MED28-201ENST00000237380 UTRNP46939 3433 aa4.22□□□□□ -1.73
MED28-201ENST00000237380 MGAQ8IWI9 3026 aa4.22□□□□□ -1.73
MED28-201ENST00000237380 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.73
MED28-201ENST00000237380 TPRXLQ17RH7 258 aa4.17□□□□□ -1.74
MED28-201ENST00000237380 VPS13AQ96RL7 3174 aa4.16□□□□□ -1.74
MED28-201ENST00000237380 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
MED28-201ENST00000237380 CFAP54Q96N23 3096 aa4.13□□□□□ -1.75
MED28-201ENST00000237380 FRYQ5TBA9 3013 aa4.12□□□□□ -1.75
MED28-201ENST00000237380 TENM3Q9P273 2699 aa4.11□□□□□ -1.75
MED28-201ENST00000237380 P0C880 135 aa4.11□□□□□ -1.75
MED28-201ENST00000237380 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
MED28-201ENST00000237380 KRTAP10-8P60410 259 aa4.1□□□□□ -1.75
MED28-201ENST00000237380 KALRNO60229 2985 aa4.1□□□□□ -1.75
MED28-201ENST00000237380 C5orf42Q9H799 3197 aa4.1□□□□□ -1.75
MED28-201ENST00000237380 ZANQ9Y493 2812 aa4.1□□□□□ -1.75
MED28-201ENST00000237380 A6NN06 94 aa4.09□□□□□ -1.75
MED28-201ENST00000237380 KRTAP13-1Q8IUC0 172 aa4.09□□□□□ -1.76
MED28-201ENST00000237380 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
MED28-201ENST00000237380 H3BS24 57 aa4.06□□□□□ -1.76
MED28-201ENST00000237380 KRTAP13-2Q52LG2 175 aa4.06□□□□□ -1.76
MED28-201ENST00000237380 NF1P21359 2839 aa4.05□□□□□ -1.76
MED28-201ENST00000237380 TENM1Q9UKZ4 2725 aa4.04□□□□□ -1.76
MED28-201ENST00000237380 KRTAP10-10P60014 251 aa4.04□□□□□ -1.76
MED28-201ENST00000237380 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
MED28-201ENST00000237380 XP32Q5T750 250 aa4.02□□□□□ -1.77
MED28-201ENST00000237380 TACC2O95359 2948 aa4.02□□□□□ -1.77
MED28-201ENST00000237380 LRBAP50851 2863 aa4.02□□□□□ -1.77
MED28-201ENST00000237380 HTTP42858 3142 aa4.01□□□□□ -1.77
MED28-201ENST00000237380 CELSR2Q9HCU4 2923 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms