RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 BOD1L1Q8NFC6 3051 aa9.7□□□□□ -0.86
NDFIP2-201ENST00000218652 CASC10Q5T4H9 136 aa9.7□□□□□ -0.86
NDFIP2-201ENST00000218652 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
NDFIP2-201ENST00000218652 LINC00304Q8N9R0 145 aa9.69□□□□□ -0.86
NDFIP2-201ENST00000218652 CD164Q04900 197 aa9.68□□□□□ -0.86
NDFIP2-201ENST00000218652 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
NDFIP2-201ENST00000218652 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
NDFIP2-201ENST00000218652 PRR26Q8N8Z3 221 aa9.67□□□□□ -0.86
NDFIP2-201ENST00000218652 ZNF292O60281 2723 aa9.66□□□□□ -0.86
NDFIP2-201ENST00000218652 A0A087WTM6 91 aa9.66□□□□□ -0.86
NDFIP2-201ENST00000218652 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
NDFIP2-201ENST00000218652 UBR5O95071 2799 aaPredicted RBP9.65□□□□□ -0.86
NDFIP2-201ENST00000218652 MGAQ8IWI9 3026 aa9.65□□□□□ -0.86
NDFIP2-201ENST00000218652 PSORS1C2Q9UIG4 136 aa9.65□□□□□ -0.86
NDFIP2-201ENST00000218652 KTN1-AS1Q86SY8 53 aa9.64□□□□□ -0.87
NDFIP2-201ENST00000218652 Q8N1X5 172 aa9.64□□□□□ -0.87
NDFIP2-201ENST00000218652 CFAP47Q6ZTR5 3102 aa9.63□□□□□ -0.87
NDFIP2-201ENST00000218652 A0A096LNT2 108 aa9.63□□□□□ -0.87
NDFIP2-201ENST00000218652 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
NDFIP2-201ENST00000218652 A0A0D9SG42 100 aa9.63□□□□□ -0.87
NDFIP2-201ENST00000218652 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
NDFIP2-201ENST00000218652 DSPP15924 2871 aaKnown RBP9.62□□□□□ -0.87
NDFIP2-201ENST00000218652 KRTAP10-3P60369 221 aa9.62□□□□□ -0.87
NDFIP2-201ENST00000218652 LCA10Q71F78 164 aa9.62□□□□□ -0.87
NDFIP2-201ENST00000218652 J3QL48 77 aa9.61□□□□□ -0.87
NDFIP2-201ENST00000218652 FAM104AQ969W3 186 aa9.61□□□□□ -0.87
NDFIP2-201ENST00000218652 NBEAL2Q6ZNJ1 2754 aa9.61□□□□□ -0.87
NDFIP2-201ENST00000218652 SPRR4Q96PI1 79 aa9.61□□□□□ -0.87
NDFIP2-201ENST00000218652 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
NDFIP2-201ENST00000218652 IGLV5-48A0A075B6I7 105 aa9.6□□□□□ -0.87
NDFIP2-201ENST00000218652 CYSTM1Q9H1C7 97 aa9.59□□□□□ -0.87
NDFIP2-201ENST00000218652 IGLV7-43P04211 117 aa9.59□□□□□ -0.87
NDFIP2-201ENST00000218652 DMXL1Q9Y485 3027 aa9.59□□□□□ -0.87
NDFIP2-201ENST00000218652 LAMA5O15230 3695 aa9.58□□□□□ -0.88
NDFIP2-201ENST00000218652 SPANXA2-OT1Q8N9U9 137 aa9.58□□□□□ -0.88
NDFIP2-201ENST00000218652 IGLV5-37A0A075B6J1 123 aa9.58□□□□□ -0.88
NDFIP2-201ENST00000218652 OCR1Q9BZK8 76 aa9.57□□□□□ -0.88
NDFIP2-201ENST00000218652 DCHS1Q96JQ0 3298 aa9.56□□□□□ -0.88
NDFIP2-201ENST00000218652 Q5XG85 94 aa9.54□□□□□ -0.88
NDFIP2-201ENST00000218652 CDC42SE1Q9NRR8 79 aa9.53□□□□□ -0.88
NDFIP2-201ENST00000218652 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
NDFIP2-201ENST00000218652 ATMQ13315 3056 aa9.5□□□□□ -0.89
NDFIP2-201ENST00000218652 OXTP01178 125 aa9.47□□□□□ -0.89
NDFIP2-201ENST00000218652 IGSF10Q6WRI0 2623 aa9.45□□□□□ -0.9
NDFIP2-201ENST00000218652 DMXL2Q8TDJ6 3036 aa9.44□□□□□ -0.9
NDFIP2-201ENST00000218652 Q1T7F1 81 aa9.43□□□□□ -0.9
NDFIP2-201ENST00000218652 RBM12B-AS1Q9P1G2 102 aa9.43□□□□□ -0.9
NDFIP2-201ENST00000218652 KMT2BQ9UMN6 2715 aaPredicted RBP9.43□□□□□ -0.9
NDFIP2-201ENST00000218652 ZFHX4Q86UP3 3567 aa9.42□□□□□ -0.9
NDFIP2-201ENST00000218652 IGLV7-46A0A075B6I9 117 aa9.39□□□□□ -0.91
NDFIP2-201ENST00000218652 HRES1P13985 223 aa9.39□□□□□ -0.91
NDFIP2-201ENST00000218652 LUZP6Q538Z0 58 aa9.37□□□□□ -0.91
NDFIP2-201ENST00000218652 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
NDFIP2-201ENST00000218652 TNP2Q05952 138 aa9.36□□□□□ -0.91
NDFIP2-201ENST00000218652 COL12A1Q99715 3063 aa9.36□□□□□ -0.91
NDFIP2-201ENST00000218652 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
NDFIP2-201ENST00000218652 A0A1B0GU33 70 aa9.36□□□□□ -0.91
NDFIP2-201ENST00000218652 FP248Q71RG6 208 aaPredicted RBP9.35□□□□□ -0.91
NDFIP2-201ENST00000218652 KRTAP1-1Q07627 177 aa9.35□□□□□ -0.91
NDFIP2-201ENST00000218652 ADGRG4Q8IZF6 3080 aa9.35□□□□□ -0.91
NDFIP2-201ENST00000218652 Q8NDZ9 215 aa9.35□□□□□ -0.91
NDFIP2-201ENST00000218652 Q8N9P0 234 aaPredicted RBP9.34□□□□□ -0.91
NDFIP2-201ENST00000218652 TACC2O95359 2948 aa9.33□□□□□ -0.92
NDFIP2-201ENST00000218652 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
NDFIP2-201ENST00000218652 ASH1LQ9NR48 2969 aaKnown RBP9.31□□□□□ -0.92
NDFIP2-201ENST00000218652 ZZEF1O43149 2961 aa9.3□□□□□ -0.92
NDFIP2-201ENST00000218652 PRAC1Q96KF2 57 aa9.3□□□□□ -0.92
NDFIP2-201ENST00000218652 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
NDFIP2-201ENST00000218652 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
NDFIP2-201ENST00000218652 Q75L30 129 aa9.28□□□□□ -0.92
NDFIP2-201ENST00000218652 Q6ZSA8 131 aa9.26□□□□□ -0.93
NDFIP2-201ENST00000218652 RELNP78509 3460 aa9.26□□□□□ -0.93
NDFIP2-201ENST00000218652 LINC01558Q9Y6Z2 57 aa9.25□□□□□ -0.93
NDFIP2-201ENST00000218652 KALRNO60229 2985 aa9.23□□□□□ -0.93
NDFIP2-201ENST00000218652 SPRR1AP35321 89 aa9.21□□□□□ -0.94
NDFIP2-201ENST00000218652 ITPR1Q14643 2758 aa9.18□□□□□ -0.94
NDFIP2-201ENST00000218652 UTP20O75691 2785 aaKnown RBP9.18□□□□□ -0.94
NDFIP2-201ENST00000218652 Q5VV11 94 aa9.18□□□□□ -0.94
NDFIP2-201ENST00000218652 SPINK7P58062 85 aa9.17□□□□□ -0.94
NDFIP2-201ENST00000218652 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
NDFIP2-201ENST00000218652 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
NDFIP2-201ENST00000218652 HIVEP1P15822 2718 aa9.14□□□□□ -0.95
NDFIP2-201ENST00000218652 SMG1Q96Q15 3661 aaKnown RBP9.14□□□□□ -0.95
NDFIP2-201ENST00000218652 Q5W150 140 aa9.14□□□□□ -0.95
NDFIP2-201ENST00000218652 FLNCQ14315 2725 aa9.13□□□□□ -0.95
NDFIP2-201ENST00000218652 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
NDFIP2-201ENST00000218652 SPENQ96T58 3664 aaKnown RBP9.1□□□□□ -0.95
NDFIP2-201ENST00000218652 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
NDFIP2-201ENST00000218652 H3BS24 57 aa9.09□□□□□ -0.95
NDFIP2-201ENST00000218652 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
NDFIP2-201ENST00000218652 SPRR1BP22528 89 aa9.08□□□□□ -0.96
NDFIP2-201ENST00000218652 M0R2T5 61 aa9.07□□□□□ -0.96
NDFIP2-201ENST00000218652 LRBAP50851 2863 aa9.06□□□□□ -0.96
NDFIP2-201ENST00000218652 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
NDFIP2-201ENST00000218652 ITPR2Q14571 2701 aa9.05□□□□□ -0.96
NDFIP2-201ENST00000218652 LINC00483Q53H64 154 aa9.02□□□□□ -0.97
NDFIP2-201ENST00000218652 R4GN34 69 aa9.01□□□□□ -0.97
NDFIP2-201ENST00000218652 CELSR2Q9HCU4 2923 aa9□□□□□ -0.97
NDFIP2-201ENST00000218652 S4R3F8 94 aa8.99□□□□□ -0.97
NDFIP2-201ENST00000218652 TENM4Q6N022 2769 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms