RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SPRR1BP22528 89 aa18.37■□□□□ 0.53
PABPN1-201ENST00000216727 C3orf84H3BNL1 204 aa18.36■□□□□ 0.53
PABPN1-201ENST00000216727 CCDC179H3BU77 68 aa18.36■□□□□ 0.53
PABPN1-201ENST00000216727 NREPQ16612 68 aa18.36■□□□□ 0.53
PABPN1-201ENST00000216727 SPRR4Q96PI1 79 aa18.36■□□□□ 0.53
PABPN1-201ENST00000216727 IGLV8-61A0A075B6I0 122 aa18.35■□□□□ 0.53
PABPN1-201ENST00000216727 PLAC8Q9NZF1 115 aa18.34■□□□□ 0.53
PABPN1-201ENST00000216727 ALMS1Q8TCU4 4167 aa18.31■□□□□ 0.52
PABPN1-201ENST00000216727 CRYGAP11844 174 aa18.27■□□□□ 0.52
PABPN1-201ENST00000216727 IGFL1Q6UW32 110 aa18.27■□□□□ 0.52
PABPN1-201ENST00000216727 SCXQ7RTU7 201 aa18.25■□□□□ 0.51
PABPN1-201ENST00000216727 UQCRQO14949 82 aa18.23■□□□□ 0.51
PABPN1-201ENST00000216727 COX7CP15954 63 aa18.22■□□□□ 0.51
PABPN1-201ENST00000216727 BPY2O14599 106 aa18.21■□□□□ 0.51
PABPN1-201ENST00000216727 SRRM2Q9UQ35 2752 aaKnown RBP18.2■□□□□ 0.5
PABPN1-201ENST00000216727 SERP2Q8N6R1 65 aa18.19■□□□□ 0.5
PABPN1-201ENST00000216727 PSORS1C2Q9UIG4 136 aa18.19■□□□□ 0.5
PABPN1-201ENST00000216727 FRAS1Q86XX4 4008 aa18.16■□□□□ 0.5
PABPN1-201ENST00000216727 A0A0G2JQZ4 141 aa18.15■□□□□ 0.5
PABPN1-201ENST00000216727 DNAH8Q96JB1 4490 aa18.14■□□□□ 0.49
PABPN1-201ENST00000216727 IGKV4-1P06312 121 aa18.11■□□□□ 0.49
PABPN1-201ENST00000216727 KRTAP10-2P60368 255 aa18.11■□□□□ 0.49
PABPN1-201ENST00000216727 DNAH11Q96DT5 4516 aa18.1■□□□□ 0.49
PABPN1-201ENST00000216727 LINC00483Q53H64 154 aa18.08■□□□□ 0.48
PABPN1-201ENST00000216727 C9orf153Q5TBE3 101 aa18.08■□□□□ 0.48
PABPN1-201ENST00000216727 Q8N9L7 120 aa18.08■□□□□ 0.48
PABPN1-201ENST00000216727 DNAH5Q8TE73 4624 aa18.07■□□□□ 0.48
PABPN1-201ENST00000216727 ZNF861PO60384 105 aa18.06■□□□□ 0.48
PABPN1-201ENST00000216727 ZNF706Q9Y5V0 76 aaPredicted RBP18.06■□□□□ 0.48
PABPN1-201ENST00000216727 SMIM20Q8N5G0 67 aa18.03■□□□□ 0.48
PABPN1-201ENST00000216727 A0A087WSZ3 146 aa18.03■□□□□ 0.48
PABPN1-201ENST00000216727 HYDINQ4G0P3 5121 aa18.01■□□□□ 0.47
PABPN1-201ENST00000216727 FAM30AQ9NZY2 134 aa17.99■□□□□ 0.47
PABPN1-201ENST00000216727 TRAV7A0A075B6U4 112 aa17.98■□□□□ 0.47
PABPN1-201ENST00000216727 DSCR10P59022 87 aa17.98■□□□□ 0.47
PABPN1-201ENST00000216727 CIRBP-AS1Q8TBR5 109 aa17.98■□□□□ 0.47
PABPN1-201ENST00000216727 FAT2Q9NYQ8 4349 aa17.97■□□□□ 0.47
PABPN1-201ENST00000216727 RPL37AP61513 92 aaKnown RBP17.96■□□□□ 0.47
PABPN1-201ENST00000216727 Q6ZSA8 131 aa17.96■□□□□ 0.47
PABPN1-201ENST00000216727 IGLV7-43P04211 117 aa17.94■□□□□ 0.46
PABPN1-201ENST00000216727 PKD1P98161 4303 aa17.94■□□□□ 0.46
PABPN1-201ENST00000216727 IGLV9-49A0A0B4J1Y8 123 aa17.91■□□□□ 0.46
PABPN1-201ENST00000216727 KRTAP10-1P60331 282 aa17.89■□□□□ 0.46
PABPN1-201ENST00000216727 K7EQZ3 153 aa17.87■□□□□ 0.45
PABPN1-201ENST00000216727 SS18L2Q9UHA2 77 aa17.86■□□□□ 0.45
PABPN1-201ENST00000216727 LINC00472Q9H8W2 130 aa17.81■□□□□ 0.44
PABPN1-201ENST00000216727 DEFB116Q30KQ4 102 aa17.81■□□□□ 0.44
PABPN1-201ENST00000216727 CYSTM1Q9H1C7 97 aa17.8■□□□□ 0.44
PABPN1-201ENST00000216727 ANAPC11Q9NYG5 84 aa17.78■□□□□ 0.44
PABPN1-201ENST00000216727 OCR1Q9BZK8 76 aa17.77■□□□□ 0.44
PABPN1-201ENST00000216727 SACSQ9NZJ4 4579 aa17.77■□□□□ 0.44
PABPN1-201ENST00000216727 MOBPQ13875 183 aa17.77■□□□□ 0.43
PABPN1-201ENST00000216727 C20orf197Q8N268 126 aa17.77■□□□□ 0.43
PABPN1-201ENST00000216727 HCG22E2RYF7 251 aa17.71■□□□□ 0.43
PABPN1-201ENST00000216727 LCE6AA0A183 80 aa17.7■□□□□ 0.42
PABPN1-201ENST00000216727 KLKP1Q107X0 134 aa17.69■□□□□ 0.42
PABPN1-201ENST00000216727 J3KT08 172 aa17.68■□□□□ 0.42
PABPN1-201ENST00000216727 A8MWP4 228 aa17.67■□□□□ 0.42
PABPN1-201ENST00000216727 LRP1BQ9NZR2 4599 aa17.67■□□□□ 0.42
PABPN1-201ENST00000216727 PRR15Q8IV56 129 aa17.65■□□□□ 0.42
PABPN1-201ENST00000216727 LINC00336Q6ZUF6 198 aa17.65■□□□□ 0.42
PABPN1-201ENST00000216727 TMEM258P61165 79 aa17.64■□□□□ 0.41
PABPN1-201ENST00000216727 HRCT1Q6UXD1 115 aa17.64■□□□□ 0.41
PABPN1-201ENST00000216727 Q96NJ1 140 aa17.62■□□□□ 0.41
PABPN1-201ENST00000216727 TMEM254Q8TBM7 123 aa17.58■□□□□ 0.4
PABPN1-201ENST00000216727 SSBP3-AS1Q7Z2R9 100 aa17.57■□□□□ 0.4
PABPN1-201ENST00000216727 SNURFQ9Y675 71 aa17.56■□□□□ 0.4
PABPN1-201ENST00000216727 KRTAP29-1A8MX34 341 aaPredicted RBP17.55■□□□□ 0.4
PABPN1-201ENST00000216727 WFDC13Q8IUB5 93 aa17.54■□□□□ 0.4
PABPN1-201ENST00000216727 CD164Q04900 197 aa17.53■□□□□ 0.4
PABPN1-201ENST00000216727 H7BZZ5 65 aa17.52■□□□□ 0.4
PABPN1-201ENST00000216727 NDUFB1O75438 58 aa17.52■□□□□ 0.4
PABPN1-201ENST00000216727 FAM229BQ4G0N7 80 aa17.49■□□□□ 0.39
PABPN1-201ENST00000216727 A0A0U1RQV1 116 aa17.48■□□□□ 0.39
PABPN1-201ENST00000216727 NDUFC1O43677 76 aa17.48■□□□□ 0.39
PABPN1-201ENST00000216727 CASC2Q6XLA1 102 aa17.48■□□□□ 0.39
PABPN1-201ENST00000216727 PKHD1P08F94 4074 aa17.46■□□□□ 0.39
PABPN1-201ENST00000216727 VPS13BQ7Z7G8 4022 aa17.44■□□□□ 0.38
PABPN1-201ENST00000216727 A0A1B0GVY2 172 aa17.44■□□□□ 0.38
PABPN1-201ENST00000216727 A0A087X002 238 aa17.43■□□□□ 0.38
PABPN1-201ENST00000216727 MMP24-AS1A0A0U1RRL7 71 aa17.42■□□□□ 0.38
PABPN1-201ENST00000216727 C5orf47Q569G3 176 aa17.41■□□□□ 0.38
PABPN1-201ENST00000216727 KRTAP13-2Q52LG2 175 aa17.4■□□□□ 0.38
PABPN1-201ENST00000216727 KRTAP1-4P0C5Y4 121 aa17.39■□□□□ 0.37
PABPN1-201ENST00000216727 A0A1B0GVX0 72 aa17.35■□□□□ 0.37
PABPN1-201ENST00000216727 FAM236DA0A1B0GTK5 79 aa17.34■□□□□ 0.37
PABPN1-201ENST00000216727 CDK2AP2O75956 126 aa17.34■□□□□ 0.37
PABPN1-201ENST00000216727 FAM236CP0DP71 79 aa17.34■□□□□ 0.37
PABPN1-201ENST00000216727 ASB16-AS1Q495Z4 193 aa17.34■□□□□ 0.37
PABPN1-201ENST00000216727 DYNC1H1Q14204 4646 aaKnown RBP17.34■□□□□ 0.37
PABPN1-201ENST00000216727 hDV103S1A0JD37 113 aa17.33■□□□□ 0.37
PABPN1-201ENST00000216727 RYR2Q92736 4967 aa17.33■□□□□ 0.36
PABPN1-201ENST00000216727 RPS28P62857 69 aaKnown RBP17.32■□□□□ 0.36
PABPN1-201ENST00000216727 C8orf17Q9NRJ1 99 aa17.31■□□□□ 0.36
PABPN1-201ENST00000216727 ZCCHC13Q8WW36 166 aaKnown RBP17.28■□□□□ 0.36
PABPN1-201ENST00000216727 IGHV6-1A0A0B4J1U7 121 aa17.27■□□□□ 0.36
PABPN1-201ENST00000216727 Q5XG85 94 aa17.26■□□□□ 0.35
PABPN1-201ENST00000216727 SPINK6Q6UWN8 80 aa17.26■□□□□ 0.35
PABPN1-201ENST00000216727 PLA2G1BP04054 148 aaKnown RBP17.23■□□□□ 0.35
PABPN1-201ENST00000216727 MP68P56378 58 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms