RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 IGLV8-61A0A075B6I0 122 aa11.4□□□□□ -0.58
CTSA-201ENST00000191018 A0A1W2PNM2 257 aa11.4□□□□□ -0.58
CTSA-201ENST00000191018 A0A1B0GW54 56 aa11.4□□□□□ -0.59
CTSA-201ENST00000191018 F8WEM9 126 aa11.4□□□□□ -0.59
CTSA-201ENST00000191018 PKD1P98161 4303 aa11.39□□□□□ -0.59
CTSA-201ENST00000191018 Q8NBF4 154 aa11.38□□□□□ -0.59
CTSA-201ENST00000191018 SRRM2Q9UQ35 2752 aaKnown RBP11.37□□□□□ -0.59
CTSA-201ENST00000191018 SPRR4Q96PI1 79 aa11.37□□□□□ -0.59
CTSA-201ENST00000191018 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
CTSA-201ENST00000191018 FAM236AA0A1B0GUQ0 79 aa11.36□□□□□ -0.59
CTSA-201ENST00000191018 FAM236BA0A1B0GV22 79 aa11.36□□□□□ -0.59
CTSA-201ENST00000191018 Q6ZSA8 131 aa11.36□□□□□ -0.59
CTSA-201ENST00000191018 SACSQ9NZJ4 4579 aa11.35□□□□□ -0.59
CTSA-201ENST00000191018 IGFL1Q6UW32 110 aa11.34□□□□□ -0.59
CTSA-201ENST00000191018 CXCL6P80162 114 aa11.34□□□□□ -0.59
CTSA-201ENST00000191018 HAMPP81172 84 aa11.34□□□□□ -0.59
CTSA-201ENST00000191018 ANAPC13Q9BS18 74 aa11.34□□□□□ -0.59
CTSA-201ENST00000191018 HIST1H4AP62805 103 aaKnown RBP11.33□□□□□ -0.6
CTSA-201ENST00000191018 CIRBP-AS1Q8TBR5 109 aa11.33□□□□□ -0.6
CTSA-201ENST00000191018 KRTAP10-1P60331 282 aa11.32□□□□□ -0.6
CTSA-201ENST00000191018 A0A087WVE0 104 aa11.32□□□□□ -0.6
CTSA-201ENST00000191018 LCE6AA0A183 80 aa11.32□□□□□ -0.6
CTSA-201ENST00000191018 CRYGAP11844 174 aa11.31□□□□□ -0.6
CTSA-201ENST00000191018 ZNF861PO60384 105 aa11.3□□□□□ -0.6
CTSA-201ENST00000191018 NREPQ16612 68 aa11.3□□□□□ -0.6
CTSA-201ENST00000191018 A0A0G2JQZ4 141 aa11.29□□□□□ -0.6
CTSA-201ENST00000191018 LINC00483Q53H64 154 aa11.29□□□□□ -0.6
CTSA-201ENST00000191018 SCXQ7RTU7 201 aa11.28□□□□□ -0.6
CTSA-201ENST00000191018 ZNF706Q9Y5V0 76 aaPredicted RBP11.26□□□□□ -0.61
CTSA-201ENST00000191018 IGLV7-43P04211 117 aa11.25□□□□□ -0.61
CTSA-201ENST00000191018 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
CTSA-201ENST00000191018 ATOX1O00244 68 aa11.21□□□□□ -0.62
CTSA-201ENST00000191018 BPY2O14599 106 aa11.2□□□□□ -0.62
CTSA-201ENST00000191018 A0A087WSZ3 146 aa11.17□□□□□ -0.62
CTSA-201ENST00000191018 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
CTSA-201ENST00000191018 IGLV9-49A0A0B4J1Y8 123 aa11.16□□□□□ -0.62
CTSA-201ENST00000191018 IGKV4-1P06312 121 aa11.15□□□□□ -0.62
CTSA-201ENST00000191018 LRP1BQ9NZR2 4599 aa11.15□□□□□ -0.62
CTSA-201ENST00000191018 C9orf153Q5TBE3 101 aa11.14□□□□□ -0.63
CTSA-201ENST00000191018 Q8N9L7 120 aa11.13□□□□□ -0.63
CTSA-201ENST00000191018 ANAPC11Q9NYG5 84 aa11.12□□□□□ -0.63
CTSA-201ENST00000191018 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
CTSA-201ENST00000191018 CCDC179H3BU77 68 aa11.12□□□□□ -0.63
CTSA-201ENST00000191018 DSCR10P59022 87 aa11.1□□□□□ -0.63
CTSA-201ENST00000191018 RYR2Q92736 4967 aa11.1□□□□□ -0.63
CTSA-201ENST00000191018 PKHD1P08F94 4074 aa11.08□□□□□ -0.63
CTSA-201ENST00000191018 MOBPQ13875 183 aa11.08□□□□□ -0.64
CTSA-201ENST00000191018 COX7CP15954 63 aa11.08□□□□□ -0.64
CTSA-201ENST00000191018 SERP2Q8N6R1 65 aa11.07□□□□□ -0.64
CTSA-201ENST00000191018 UQCRQO14949 82 aa11.06□□□□□ -0.64
CTSA-201ENST00000191018 LINC00472Q9H8W2 130 aa11.04□□□□□ -0.64
CTSA-201ENST00000191018 K7EQZ3 153 aa11.04□□□□□ -0.64
CTSA-201ENST00000191018 KMT2CQ8NEZ4 4911 aaKnown RBP11.03□□□□□ -0.64
CTSA-201ENST00000191018 DEFB116Q30KQ4 102 aa11.03□□□□□ -0.64
CTSA-201ENST00000191018 DYNC1H1Q14204 4646 aaKnown RBP11.02□□□□□ -0.65
CTSA-201ENST00000191018 SMIM20Q8N5G0 67 aa11□□□□□ -0.65
CTSA-201ENST00000191018 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
CTSA-201ENST00000191018 HRCT1Q6UXD1 115 aa10.98□□□□□ -0.65
CTSA-201ENST00000191018 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
CTSA-201ENST00000191018 SSBP3-AS1Q7Z2R9 100 aa10.97□□□□□ -0.65
CTSA-201ENST00000191018 Q96NJ1 140 aa10.96□□□□□ -0.65
CTSA-201ENST00000191018 SS18L2Q9UHA2 77 aa10.96□□□□□ -0.65
CTSA-201ENST00000191018 FAM229BQ4G0N7 80 aa10.95□□□□□ -0.66
CTSA-201ENST00000191018 KRTAP1-4P0C5Y4 121 aa10.95□□□□□ -0.66
CTSA-201ENST00000191018 A0A087X002 238 aa10.94□□□□□ -0.66
CTSA-201ENST00000191018 J3KT08 172 aa10.93□□□□□ -0.66
CTSA-201ENST00000191018 A8MWP4 228 aa10.93□□□□□ -0.66
CTSA-201ENST00000191018 CD164Q04900 197 aa10.93□□□□□ -0.66
CTSA-201ENST00000191018 KRTAP13-2Q52LG2 175 aa10.93□□□□□ -0.66
CTSA-201ENST00000191018 PRR15Q8IV56 129 aa10.91□□□□□ -0.66
CTSA-201ENST00000191018 HCG22E2RYF7 251 aa10.91□□□□□ -0.66
CTSA-201ENST00000191018 OCR1Q9BZK8 76 aa10.9□□□□□ -0.66
CTSA-201ENST00000191018 APOBP04114 4563 aaKnown RBP10.89□□□□□ -0.67
CTSA-201ENST00000191018 SPINK6Q6UWN8 80 aa10.87□□□□□ -0.67
CTSA-201ENST00000191018 SMR3BP02814 79 aaPredicted RBP10.85□□□□□ -0.67
CTSA-201ENST00000191018 CYSTM1Q9H1C7 97 aa10.85□□□□□ -0.67
CTSA-201ENST00000191018 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
CTSA-201ENST00000191018 C20orf197Q8N268 126 aa10.83□□□□□ -0.68
CTSA-201ENST00000191018 NDUFB1O75438 58 aa10.82□□□□□ -0.68
CTSA-201ENST00000191018 KRTAP10-4P60372 401 aaPredicted RBP10.82□□□□□ -0.68
CTSA-201ENST00000191018 PLA2G1BP04054 148 aaKnown RBP10.81□□□□□ -0.68
CTSA-201ENST00000191018 ASB16-AS1Q495Z4 193 aa10.81□□□□□ -0.68
CTSA-201ENST00000191018 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
CTSA-201ENST00000191018 MMP24-AS1A0A0U1RRL7 71 aa10.78□□□□□ -0.68
CTSA-201ENST00000191018 KLKP1Q107X0 134 aa10.78□□□□□ -0.68
CTSA-201ENST00000191018 CASC2Q6XLA1 102 aa10.78□□□□□ -0.68
CTSA-201ENST00000191018 Q5XG85 94 aa10.78□□□□□ -0.68
CTSA-201ENST00000191018 RYR3Q15413 4870 aa10.77□□□□□ -0.69
CTSA-201ENST00000191018 A0A1B0GVX0 72 aa10.76□□□□□ -0.69
CTSA-201ENST00000191018 FAT1Q14517 4588 aa10.75□□□□□ -0.69
CTSA-201ENST00000191018 TMEM254Q8TBM7 123 aa10.74□□□□□ -0.69
CTSA-201ENST00000191018 TYMSOSQ8TAI1 123 aa10.73□□□□□ -0.69
CTSA-201ENST00000191018 CDK2AP2O75956 126 aa10.72□□□□□ -0.69
CTSA-201ENST00000191018 C8orf17Q9NRJ1 99 aa10.72□□□□□ -0.69
CTSA-201ENST00000191018 SNURFQ9Y675 71 aa10.72□□□□□ -0.69
CTSA-201ENST00000191018 hDV103S1A0JD37 113 aa10.71□□□□□ -0.69
CTSA-201ENST00000191018 IGHV6-1A0A0B4J1U7 121 aa10.7□□□□□ -0.7
CTSA-201ENST00000191018 A0A0U1RQV1 116 aa10.7□□□□□ -0.7
CTSA-201ENST00000191018 PRR26Q8N8Z3 221 aa10.68□□□□□ -0.7
CTSA-201ENST00000191018 H7BZZ5 65 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms