RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 LCE6AA0A183 80 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 Q8N377 158 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 HECTD1Q9ULT8 2610 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 WIPF1O43516 503 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 M0QZ58 72 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 ITPR2Q14571 2701 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 AKAP13Q12802 2813 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 A0A1W2PNN7 141 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 NBEAL1Q6ZS30 2694 aa2.2□□□□□ -2.06
NEB-201ENST00000172853 FRYLO94915 3013 aa2.19□□□□□ -2.06
NEB-201ENST00000172853 CHD9Q3L8U1 2897 aa2.19□□□□□ -2.06
NEB-201ENST00000172853 DSPP15924 2871 aaKnown RBP2.19□□□□□ -2.06
NEB-201ENST00000172853 P0C880 135 aa2.19□□□□□ -2.06
NEB-201ENST00000172853 EIF4EBP3O60516 100 aaPredicted RBP2.18□□□□□ -2.06
NEB-201ENST00000172853 A0A0C4DFX4 3053 aa2.18□□□□□ -2.06
NEB-201ENST00000172853 CHD7Q9P2D1 2997 aa2.18□□□□□ -2.06
NEB-201ENST00000172853 LAMA2P24043 3122 aaKnown RBP2.17□□□□□ -2.06
NEB-201ENST00000172853 LAMA3Q16787 3333 aa2.17□□□□□ -2.06
NEB-201ENST00000172853 BRCA2P51587 3418 aa2.17□□□□□ -2.06
NEB-201ENST00000172853 ATRQ13535 2644 aa2.17□□□□□ -2.06
NEB-201ENST00000172853 CDH23Q9H251 3354 aa2.17□□□□□ -2.06
NEB-201ENST00000172853 RPL37P61927 97 aaKnown RBP2.16□□□□□ -2.06
NEB-201ENST00000172853 SETXQ7Z333 2677 aaKnown RBP2.16□□□□□ -2.06
NEB-201ENST00000172853 MAP1AP78559 2803 aaPredicted RBP2.16□□□□□ -2.06
NEB-201ENST00000172853 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
NEB-201ENST00000172853 ROMO1P60602 79 aa2.16□□□□□ -2.06
NEB-201ENST00000172853 NSD1Q96L73 2696 aaPredicted RBP2.16□□□□□ -2.06
NEB-201ENST00000172853 BPTFQ12830 3046 aa2.15□□□□□ -2.06
NEB-201ENST00000172853 Q8N9P0 234 aaPredicted RBP2.15□□□□□ -2.06
NEB-201ENST00000172853 PLAC8Q9NZF1 115 aa2.15□□□□□ -2.06
NEB-201ENST00000172853 STAB1Q9NY15 2570 aa2.15□□□□□ -2.07
NEB-201ENST00000172853 MGAM2Q2M2H8 2515 aa2.15□□□□□ -2.07
NEB-201ENST00000172853 A8MU10 97 aa2.15□□□□□ -2.07
NEB-201ENST00000172853 REV3LO60673 3130 aa2.14□□□□□ -2.07
NEB-201ENST00000172853 ADM2Q7Z4H4 148 aa2.14□□□□□ -2.07
NEB-201ENST00000172853 SZT2Q5T011 3432 aa2.14□□□□□ -2.07
NEB-201ENST00000172853 KRTAP21-3Q3LHN1 58 aa2.13□□□□□ -2.07
NEB-201ENST00000172853 SPRR1BP22528 89 aa2.13□□□□□ -2.07
NEB-201ENST00000172853 A0A0G2JQZ4 141 aa2.13□□□□□ -2.07
NEB-201ENST00000172853 UNC79Q9P2D8 2635 aa2.13□□□□□ -2.07
NEB-201ENST00000172853 UTP20O75691 2785 aaKnown RBP2.13□□□□□ -2.07
NEB-201ENST00000172853 KLKP1Q107X0 134 aa2.12□□□□□ -2.07
NEB-201ENST00000172853 MKI67P46013 3256 aaKnown RBP2.12□□□□□ -2.07
NEB-201ENST00000172853 KRTAP10-3P60369 221 aa2.12□□□□□ -2.07
NEB-201ENST00000172853 KLK9Q2XQG4 91 aa2.12□□□□□ -2.07
NEB-201ENST00000172853 SPTBN5Q9NRC6 3674 aaKnown RBP2.12□□□□□ -2.07
NEB-201ENST00000172853 ITPR1Q14643 2758 aa2.11□□□□□ -2.07
NEB-201ENST00000172853 GIG44P09565 113 aaPredicted RBP2.11□□□□□ -2.07
NEB-201ENST00000172853 NOTCH1P46531 2555 aa2.11□□□□□ -2.07
NEB-201ENST00000172853 TNP1P09430 55 aa2.11□□□□□ -2.07
NEB-201ENST00000172853 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
NEB-201ENST00000172853 XIRP2A4UGR9 3374 aa2.11□□□□□ -2.07
NEB-201ENST00000172853 Q5W150 140 aa2.09□□□□□ -2.07
NEB-201ENST00000172853 PRUNE2Q8WUY3 3088 aa2.09□□□□□ -2.07
NEB-201ENST00000172853 CFAP54Q96N23 3096 aa2.09□□□□□ -2.07
NEB-201ENST00000172853 Q75L30 129 aa2.09□□□□□ -2.07
NEB-201ENST00000172853 TEX15Q9BXT5 2789 aa2.09□□□□□ -2.08
NEB-201ENST00000172853 ASH1LQ9NR48 2969 aaKnown RBP2.09□□□□□ -2.08
NEB-201ENST00000172853 USP34Q70CQ2 3546 aa2.09□□□□□ -2.08
NEB-201ENST00000172853 LINC01558Q9Y6Z2 57 aa2.09□□□□□ -2.08
NEB-201ENST00000172853 MMP24-AS1A0A0U1RRL7 71 aa2.08□□□□□ -2.08
NEB-201ENST00000172853 KALRNO60229 2985 aa2.08□□□□□ -2.08
NEB-201ENST00000172853 HRNRQ86YZ3 2850 aaPredicted RBP2.08□□□□□ -2.08
NEB-201ENST00000172853 WDFY4Q6ZS81 3184 aa2.08□□□□□ -2.08
NEB-201ENST00000172853 A8MUU9 505 aa2.08□□□□□ -2.08
NEB-201ENST00000172853 COL6A5A8TX70 2615 aa2.08□□□□□ -2.08
NEB-201ENST00000172853 PRO2289Q9P1D8 64 aa2.08□□□□□ -2.08
NEB-201ENST00000172853 MGAQ8IWI9 3026 aa2.07□□□□□ -2.08
NEB-201ENST00000172853 UBR5O95071 2799 aaPredicted RBP2.07□□□□□ -2.08
NEB-201ENST00000172853 VPS13AQ96RL7 3174 aa2.06□□□□□ -2.08
NEB-201ENST00000172853 KRTAP10-1P60331 282 aa2.06□□□□□ -2.08
NEB-201ENST00000172853 NBEAQ8NFP9 2946 aa2.06□□□□□ -2.08
NEB-201ENST00000172853 UNC80Q8N2C7 3258 aa2.06□□□□□ -2.08
NEB-201ENST00000172853 Q8NDZ9 215 aa2.05□□□□□ -2.08
NEB-201ENST00000172853 KRTAP16-1A8MUX0 517 aa2.05□□□□□ -2.08
NEB-201ENST00000172853 PANO1I0J062 215 aa2.05□□□□□ -2.08
NEB-201ENST00000172853 TACC2O95359 2948 aa2.05□□□□□ -2.08
NEB-201ENST00000172853 ZANQ9Y493 2812 aa2.04□□□□□ -2.08
NEB-201ENST00000172853 OCR1Q9BZK8 76 aa2.04□□□□□ -2.08
NEB-201ENST00000172853 HIVEP1P15822 2718 aa2.04□□□□□ -2.08
NEB-201ENST00000172853 RPS29P62273 56 aaKnown RBP2.04□□□□□ -2.08
NEB-201ENST00000172853 NIPBLQ6KC79 2804 aaeCLIP2.04□□□□□ -2.08
NEB-201ENST00000172853 VCANP13611 3396 aa2.03□□□□□ -2.08
NEB-201ENST00000172853 Q5VV11 94 aa2.03□□□□□ -2.08
NEB-201ENST00000172853 KRTAP10-8P60410 259 aa2.03□□□□□ -2.08
NEB-201ENST00000172853 LRBAP50851 2863 aa2.03□□□□□ -2.08
NEB-201ENST00000172853 ASB16-AS1Q495Z4 193 aa2.03□□□□□ -2.09
NEB-201ENST00000172853 COL6A3P12111 3177 aa2.02□□□□□ -2.09
NEB-201ENST00000172853 MXRA5Q9NR99 2828 aa2.02□□□□□ -2.09
NEB-201ENST00000172853 FRYQ5TBA9 3013 aa2.02□□□□□ -2.09
NEB-201ENST00000172853 DMDP11532 3685 aa2.02□□□□□ -2.09
NEB-201ENST00000172853 Q6ZR54 194 aa2.02□□□□□ -2.09
NEB-201ENST00000172853 A0A096LNT2 108 aa2.02□□□□□ -2.09
NEB-201ENST00000172853 CRYBG3Q68DQ2 2970 aa2.01□□□□□ -2.09
NEB-201ENST00000172853 FREM2Q5SZK8 3169 aa2.01□□□□□ -2.09
NEB-201ENST00000172853 KRTAP10-2P60368 255 aa2.01□□□□□ -2.09
NEB-201ENST00000172853 FLG2Q5D862 2391 aaPredicted RBP2.01□□□□□ -2.09
NEB-201ENST00000172853 C10orf95Q9H7T3 257 aa2.01□□□□□ -2.09
NEB-201ENST00000172853 DMXL1Q9Y485 3027 aa2.01□□□□□ -2.09
NEB-201ENST00000172853 KRTAP1-3Q8IUG1 177 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms