RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 LINC01556Q5JQF7 62 aa10.69□□□□□ -0.7
CTDP1-201ENST00000075430 REG3GQ6UW15 175 aa10.68□□□□□ -0.7
CTDP1-201ENST00000075430 UBE2DNLQ8IWF7 75 aa10.68□□□□□ -0.7
CTDP1-201ENST00000075430 IGFL1Q6UW32 110 aa10.68□□□□□ -0.7
CTDP1-201ENST00000075430 UBE2AP49459 152 aa10.68□□□□□ -0.7
CTDP1-201ENST00000075430 KRTAP7-1Q8IUC3 87 aa10.68□□□□□ -0.7
CTDP1-201ENST00000075430 LINC00588Q9Y4M8 146 aa10.67□□□□□ -0.7
CTDP1-201ENST00000075430 PCOTHQ58A44 107 aa10.67□□□□□ -0.7
CTDP1-201ENST00000075430 TRAV22A0A0B4J277 110 aa10.66□□□□□ -0.7
CTDP1-201ENST00000075430 CHKB-CPT1BH3BT56 60 aa10.63□□□□□ -0.71
CTDP1-201ENST00000075430 H0Y9P7 68 aa10.62□□□□□ -0.71
CTDP1-201ENST00000075430 NDUFS5O43920 106 aa10.61□□□□□ -0.71
CTDP1-201ENST00000075430 PHF5AQ7RTV0 110 aaKnown RBP10.61□□□□□ -0.71
CTDP1-201ENST00000075430 CASC2Q6XLA1 102 aa10.6□□□□□ -0.71
CTDP1-201ENST00000075430 PRR15LQ9BU68 103 aa10.6□□□□□ -0.71
CTDP1-201ENST00000075430 SEC61GP60059 68 aa10.58□□□□□ -0.72
CTDP1-201ENST00000075430 TNP2Q05952 138 aa10.58□□□□□ -0.72
CTDP1-201ENST00000075430 PMAIP1Q13794 54 aa10.58□□□□□ -0.72
CTDP1-201ENST00000075430 IGLV9-49A0A0B4J1Y8 123 aa10.58□□□□□ -0.72
CTDP1-201ENST00000075430 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
CTDP1-201ENST00000075430 B9D2Q9BPU9 175 aa10.58□□□□□ -0.72
CTDP1-201ENST00000075430 H3BNG1 76 aa10.57□□□□□ -0.72
CTDP1-201ENST00000075430 ANK2Q01484 3957 aa10.56□□□□□ -0.72
CTDP1-201ENST00000075430 SPRR4Q96PI1 79 aa10.55□□□□□ -0.72
CTDP1-201ENST00000075430 K7EIL1 84 aa10.54□□□□□ -0.72
CTDP1-201ENST00000075430 DNAH10OSP0CZ25 163 aa10.53□□□□□ -0.72
CTDP1-201ENST00000075430 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
CTDP1-201ENST00000075430 A6NED7 52 aa10.5□□□□□ -0.73
CTDP1-201ENST00000075430 SPRR1AP35321 89 aa10.5□□□□□ -0.73
CTDP1-201ENST00000075430 ZCCHC13Q8WW36 166 aaKnown RBP10.49□□□□□ -0.73
CTDP1-201ENST00000075430 SPAG11AQ6PDA7 123 aa10.47□□□□□ -0.73
CTDP1-201ENST00000075430 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
CTDP1-201ENST00000075430 NDUFB1O75438 58 aa10.46□□□□□ -0.73
CTDP1-201ENST00000075430 KRTAP1-5Q9BYS1 174 aa10.46□□□□□ -0.73
CTDP1-201ENST00000075430 TLX1NBP0CAT3 122 aa10.45□□□□□ -0.74
CTDP1-201ENST00000075430 Q1T7F1 81 aa10.45□□□□□ -0.74
CTDP1-201ENST00000075430 SPINK6Q6UWN8 80 aa10.45□□□□□ -0.74
CTDP1-201ENST00000075430 PRR15Q8IV56 129 aa10.45□□□□□ -0.74
CTDP1-201ENST00000075430 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
CTDP1-201ENST00000075430 IGHV6-1A0A0B4J1U7 121 aa10.43□□□□□ -0.74
CTDP1-201ENST00000075430 DNAH10Q8IVF4 4471 aa10.43□□□□□ -0.74
CTDP1-201ENST00000075430 Q5VV11 94 aa10.41□□□□□ -0.74
CTDP1-201ENST00000075430 PLA2G2DQ9UNK4 145 aa10.39□□□□□ -0.75
CTDP1-201ENST00000075430 LYSTQ99698 3801 aa10.39□□□□□ -0.75
CTDP1-201ENST00000075430 LCE6AA0A183 80 aa10.38□□□□□ -0.75
CTDP1-201ENST00000075430 COA5Q86WW8 74 aa10.38□□□□□ -0.75
CTDP1-201ENST00000075430 Q8N9P0 234 aaPredicted RBP10.37□□□□□ -0.75
CTDP1-201ENST00000075430 RETNLBQ9BQ08 111 aa10.37□□□□□ -0.75
CTDP1-201ENST00000075430 A0A1B0GW54 56 aa10.36□□□□□ -0.75
CTDP1-201ENST00000075430 F8WDY8 70 aa10.36□□□□□ -0.75
CTDP1-201ENST00000075430 C16orf90A8MZG2 172 aa10.36□□□□□ -0.75
CTDP1-201ENST00000075430 IGLV5-37A0A075B6J1 123 aa10.36□□□□□ -0.75
CTDP1-201ENST00000075430 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
CTDP1-201ENST00000075430 A8MWP4 228 aa10.35□□□□□ -0.75
CTDP1-201ENST00000075430 PANO1I0J062 215 aa10.34□□□□□ -0.75
CTDP1-201ENST00000075430 CDK2AP2O75956 126 aa10.33□□□□□ -0.76
CTDP1-201ENST00000075430 TGP01266 2768 aa10.33□□□□□ -0.76
CTDP1-201ENST00000075430 KRTAP29-1A8MX34 341 aaPredicted RBP10.32□□□□□ -0.76
CTDP1-201ENST00000075430 MDFIQ99750 246 aa10.29□□□□□ -0.76
CTDP1-201ENST00000075430 LINC00472Q9H8W2 130 aa10.28□□□□□ -0.76
CTDP1-201ENST00000075430 CD164Q04900 197 aa10.26□□□□□ -0.77
CTDP1-201ENST00000075430 MOBPQ13875 183 aa10.26□□□□□ -0.77
CTDP1-201ENST00000075430 LCA10Q71F78 164 aa10.26□□□□□ -0.77
CTDP1-201ENST00000075430 LIMD2Q9BT23 127 aa10.26□□□□□ -0.77
CTDP1-201ENST00000075430 MMP24-AS1A0A0U1RRL7 71 aa10.25□□□□□ -0.77
CTDP1-201ENST00000075430 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
CTDP1-201ENST00000075430 A0A087X002 238 aa10.24□□□□□ -0.77
CTDP1-201ENST00000075430 NOTCH2NLQ7Z3S9 236 aa10.24□□□□□ -0.77
CTDP1-201ENST00000075430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.19□□□□□ -0.78
CTDP1-201ENST00000075430 C14orf177Q52M58 125 aa10.19□□□□□ -0.78
CTDP1-201ENST00000075430 APLNQ9ULZ1 77 aa10.19□□□□□ -0.78
CTDP1-201ENST00000075430 SPINK7P58062 85 aa10.18□□□□□ -0.78
CTDP1-201ENST00000075430 FBN3Q75N90 2809 aa10.18□□□□□ -0.78
CTDP1-201ENST00000075430 CIRBP-AS1Q8TBR5 109 aa10.17□□□□□ -0.78
CTDP1-201ENST00000075430 C8orf17Q9NRJ1 99 aa10.17□□□□□ -0.78
CTDP1-201ENST00000075430 C9orf163Q8N9P6 203 aa10.17□□□□□ -0.78
CTDP1-201ENST00000075430 NBDYA0A0U1RRE5 68 aa10.16□□□□□ -0.78
CTDP1-201ENST00000075430 IGLV8-61A0A075B6I0 122 aa10.15□□□□□ -0.78
CTDP1-201ENST00000075430 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.78
CTDP1-201ENST00000075430 LOC101927531A0A1B0GV80 90 aa10.14□□□□□ -0.79
CTDP1-201ENST00000075430 IGLV7-46A0A075B6I9 117 aa10.13□□□□□ -0.79
CTDP1-201ENST00000075430 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
CTDP1-201ENST00000075430 HRES1P13985 223 aa10.11□□□□□ -0.79
CTDP1-201ENST00000075430 H3BPC8 53 aa10.1□□□□□ -0.79
CTDP1-201ENST00000075430 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
CTDP1-201ENST00000075430 DNAH9Q9NYC9 4486 aa10.07□□□□□ -0.8
CTDP1-201ENST00000075430 KTN1-AS1Q86SY8 53 aa10.07□□□□□ -0.8
CTDP1-201ENST00000075430 A0A1B0GVX0 72 aa10.07□□□□□ -0.8
CTDP1-201ENST00000075430 LY6G6CO95867 125 aa10.07□□□□□ -0.8
CTDP1-201ENST00000075430 MRPL34Q9BQ48 92 aaKnown RBP10.07□□□□□ -0.8
CTDP1-201ENST00000075430 PRAC1Q96KF2 57 aa10.06□□□□□ -0.8
CTDP1-201ENST00000075430 NUPR2A6NF83 97 aa10.06□□□□□ -0.8
CTDP1-201ENST00000075430 Q5W150 140 aa10.05□□□□□ -0.8
CTDP1-201ENST00000075430 PSORS1C2Q9UIG4 136 aa10.05□□□□□ -0.8
CTDP1-201ENST00000075430 ATP11AUNQ6ZP68 121 aa10.04□□□□□ -0.8
CTDP1-201ENST00000075430 Q75L30 129 aa10.04□□□□□ -0.8
CTDP1-201ENST00000075430 Q96NJ1 140 aa10.04□□□□□ -0.8
CTDP1-201ENST00000075430 CMYA5Q8N3K9 4069 aa10.02□□□□□ -0.8
CTDP1-201ENST00000075430 SPRR1BP22528 89 aa10.02□□□□□ -0.81
CTDP1-201ENST00000075430 TP53AIP1Q9HCN2 124 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms