RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Tspoap1Q7TNF8 1846 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Znf385cA2A5E6 429 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Loxhd1C8YR32 2068 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Lypd1Q8BLC3 141 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Muc15Q8C6Z1 331 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gtsf1Q9DAN6 167 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Pla2g2fQ9QZT4 168 aa13.39□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Trpm7Q923J1 1863 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Atp5eP56382 52 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Fam216aQ9DB54 251 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm21789J3QMZ1 123 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm21870J3QPN2 123 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm21883J3QPV3 123 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Smim26Q3V460 107 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Ifi27l2aQ8R412 90 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Defb3Q9WTL0 63 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 CntfrO88507 372 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Clpsl2Q3UW21 102 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Pate2Q3UW31 111 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm10762Q9CZN6 115 aa13.38□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm10638F6QEG2 257 aa13.37□□□□□ -0.27
Col17a1-202ENSMUST00000086923 P01789 122 aa13.37□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Ccl4P14097 92 aa13.37□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Spint3Q3UW09 88 aa13.37□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm11733Q8BQP1 125 aa13.37□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Trbv30A0A0B4J1P1 111 aa13.37□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm15091B1AZM2 449 aa13.37□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Sh2d6Q9D413 297 aa13.37□□□□□ -0.27
Col17a1-202ENSMUST00000086923 CrygsO35486 178 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 P01793 123 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 P01794 123 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 P03980 138 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 LitafQ9JLJ0 161 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Igkv6-13A0A0G2JGY3 119 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Neurog3P70661 214 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Gm12057A0A087WR21 115 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 VwceQ3U515 929 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Trav14-2A0A075B694 121 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Cox6a1P43024 111 aa13.36□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Ss18Q62280 418 aa13.35□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Fam168aQ8BGZ2 244 aa13.35□□□□□ -0.27
Col17a1-202ENSMUST00000086923 MplkipQ9D011 178 aa13.35□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Inafm1E9PV59 130 aa13.35□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Dusp14Q9JLY7 198 aa13.35□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Ubl5Q9EPV8 73 aa13.35□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Cabin1G3X8Q1 2187 aaKnown RBP13.35□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Ighv1-76A0A0G2JFE9 117 aa13.35□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Cacna1hO88427 2365 aa13.34□□□□□ -0.27
Col17a1-202ENSMUST00000086923 SktA2AQ25 1946 aaKnown RBP13.34□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Trav4n-4A0A075B615 110 aa13.34□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Prok2Q9QXU7 128 aa13.34□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Tm2d1Q99MB3 208 aa13.34□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Shank1D3YZU1 2167 aa13.34□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Timm21Q8CCM6 249 aa13.33□□□□□ -0.27
Col17a1-202ENSMUST00000086923 Iglc1A0A0G2JE99 106 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Trav7-1A0A0G2JEV5 112 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 P01843 105 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Il1f10Q8R459 152 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Ighv1-26A0A075B5V0 117 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Trbv12-1A0A0B4J1H0 124 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Cpsf4lE9Q2N0 280 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Rasl10aQ8K5A4 203 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Rbbp6P97868 1790 aaKnown RBP13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Atp6v0e2Q91XE7 81 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 IcosQ9WVS0 200 aa13.33□□□□□ -0.28
Col17a1-202ENSMUST00000086923 eef1akmt3D3YWP0 232 aa13.32□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Zg16Q8K0C5 167 aa13.32□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Mrps18cQ8R2L5 143 aaKnown RBP13.32□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Sfta2E9PXB6 77 aa13.32□□□□□ -0.28
Col17a1-202ENSMUST00000086923 P01724 129 aa13.32□□□□□ -0.28
Col17a1-202ENSMUST00000086923 P01727 129 aa13.32□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Klk1b4P00757 256 aa13.32□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Abca1P41233 2261 aa13.32□□□□□ -0.28
Col17a1-202ENSMUST00000086923 PappaQ8R4K8 1624 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Amn1B8JKV0 258 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Gm20403G3UYB0 123 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Tmem213Q08EA8 116 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 P01791 123 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Trav9-1A0A075B601 112 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Ccl11P48298 97 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Rnf115Q9D0C1 305 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Icam4Q9ERM2 262 aa13.31□□□□□ -0.28
Col17a1-202ENSMUST00000086923 1700001C19RikQ8K168 210 aa13.3□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Cdk2ap2Q9CPY4 127 aa13.3□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Lect2O88803 151 aa13.3□□□□□ -0.28
Col17a1-202ENSMUST00000086923 H1fxQ80ZM5 188 aa13.3□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Wnk2Q3UH66 2149 aa13.3□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Igkv14-126A0A075B5K0 117 aa13.3□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Wisp3D3Z5L9 354 aa13.3□□□□□ -0.28
Col17a1-202ENSMUST00000086923 4931428L18RikQ9D4S9 127 aa13.3□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Igkv4-70A0A0B4J1I5 116 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Gm20219A0A1B0GRQ3 87 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Klf14Q19A41 325 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Cacna1aP97445 2368 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Ighv5-12-4A0A0A6YWG4 117 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Lamtor3O88653 124 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 P01792 123 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Gm6040Q4QY32 63 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Lmo1Q924W9 156 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 F8Q06194 2319 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms