RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Rchy1Q9CR50 261 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Tmem160Q9D938 188 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Wisp2Q9Z0G4 251 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 A0A1Y7VMQ4 148 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Cnih1O35372 144 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Rps20P60867 119 aaKnown RBP10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Adam8Q05910 826 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Arl6ip6Q8BH07 226 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Errfi1Q99JZ7 461 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Borcs7Q9CRC6 105 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 CtrlQ9ER05 264 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Shisal2aA2A9G7 189 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Nxph4G3X9N5 304 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Cox8bP48772 70 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Gm7489Q3UT34 171 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Tomm6Q9CQN3 74 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Cml3Q9JIY8 226 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 SetxA2AKX3 2646 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Sptbn2Q68FG2 2388 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Trav14n-2A0A0G2JDF5 121 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Thy1P01831 162 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 TbpP29037 316 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Map6d1Q14BB9 191 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Pxt1Q8K459 51 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Q9CQM1 111 aa10.56□□□□□ -0.72
Nup88-201ENSMUST00000035283 Gm17359A0A0G2JEB7 487 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ovol3D3YYM0 189 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 9230109A22RikQ8BHE6 111 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Habp2Q8K0D2 558 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Plrg1Q922V4 513 aaKnown RBP10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Mrpl53Q9D1H8 118 aaKnown RBP10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 PerpQ9JK95 193 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ighv4-1A0A075B5R5 116 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Trdv1A0A075B657 112 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Smim13E9Q942 88 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Adrb3P25962 400 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Vmn1r197Q8R265 298 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Prr23a3Q9CWP9 254 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Sec11aQ9R0P6 179 aa10.55□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ighv1-69A0A0G2JFS5 117 aa10.54□□□□□ -0.72
Nup88-201ENSMUST00000035283 BC030500E9Q6W0 185 aa10.54□□□□□ -0.72
Nup88-201ENSMUST00000035283 Fam216bQ8CC14 138 aa10.54□□□□□ -0.72
Nup88-201ENSMUST00000035283 Trpt1Q8K3A2 249 aa10.54□□□□□ -0.72
Nup88-201ENSMUST00000035283 Slc17a9Q8VCL5 447 aa10.54□□□□□ -0.72
Nup88-201ENSMUST00000035283 UrahQ9CRB3 118 aa10.54□□□□□ -0.72
Nup88-201ENSMUST00000035283 AcanQ61282 2132 aaKnown RBP10.54□□□□□ -0.72
Nup88-201ENSMUST00000035283 Olfr904Q7TRC9 310 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Spink2Q8BMY7 86 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Snx22Q8C084 192 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Muc15Q8C6Z1 331 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Rasl10aQ8K5A4 203 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Plekhb2Q9QZC7 221 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ighv14-3A0A075B5R9 117 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ighv2-6A0A075B6A7 116 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ighv8-8A0A0A6YXQ0 119 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 P18532 116 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Defa13P50711 93 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Fbxl15Q91W61 300 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Wfdc2Q9DAU7 174 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Timm23Q9WTQ8 209 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 Dopey1Q8BL99 2399 aa10.53□□□□□ -0.72
Nup88-201ENSMUST00000035283 1700003H04RikE9PXM2 192 aa10.52□□□□□ -0.72
Nup88-201ENSMUST00000035283 Smad7O35253 426 aa10.52□□□□□ -0.72
Nup88-201ENSMUST00000035283 Cd5P13379 494 aa10.52□□□□□ -0.72
Nup88-201ENSMUST00000035283 Gm10604Q3V0X7 143 aa10.52□□□□□ -0.72
Nup88-201ENSMUST00000035283 NpbQ8K4P1 119 aa10.52□□□□□ -0.72
Nup88-201ENSMUST00000035283 Insig2Q91WG1 225 aa10.52□□□□□ -0.72
Nup88-201ENSMUST00000035283 Q9D131 166 aa10.52□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ash1lQ99MY8 2958 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 Tln1P26039 2541 aaKnown RBP10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ighv5-6A0A075B5Q0 117 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 KprpB2RUR4 657 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gata3P23772 443 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 B230104I21RikQ3USW4 141 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 Smim15Q3UTD9 74 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 Slc35d2Q762D5 326 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 Higd1cQ76I25 96 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 Rabac1Q9Z0S9 185 aa10.52□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gm5157A0A087WRH8 301 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 D930048N14RikA2AA67 225 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gm15293D3YX02 93 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ccdc71lE9Q4T4 218 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Mtatp8P03930 67 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gm10277Q6R5C6 214 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Srd5a2Q99N99 254 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Pygo1Q9D0P5 417 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gnb1lQ9EQ15 326 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Adgrg4B7ZCC9 3073 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Gm12057A0A087WR21 115 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Esp38A8R0X1 80 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 B1ARW8 110 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Rbms1Q91W59 403 aaKnown RBP10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Plxdc1Q91ZV7 500 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Cby1Q9D1C2 127 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Ociad2Q9D8W7 154 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Icam4Q9ERM2 262 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Cmya5Q70KF4 3739 aa10.51□□□□□ -0.73
Nup88-201ENSMUST00000035283 Trav16nA0A075B634 117 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 Cd24P24807 76 aa10.5□□□□□ -0.73
Nup88-201ENSMUST00000035283 PdpnQ62011 172 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 98.2 ms