RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SPTBN5Q9NRC6 3674 aaKnown RBP11.17□□□□□ -0.62
SCARB2-210ENST00000638567 COL12A1Q99715 3063 aa11.17□□□□□ -0.62
SCARB2-210ENST00000638567 Q8NBF4 154 aa11.17□□□□□ -0.62
SCARB2-210ENST00000638567 ZZEF1O43149 2961 aa11.16□□□□□ -0.62
SCARB2-210ENST00000638567 GCN1Q92616 2671 aaKnown RBP11.14□□□□□ -0.63
SCARB2-210ENST00000638567 LINC00612Q8N6U2 182 aa11.13□□□□□ -0.63
SCARB2-210ENST00000638567 PRR15LQ9BU68 103 aa11.13□□□□□ -0.63
SCARB2-210ENST00000638567 TEX15Q9BXT5 2789 aa11.13□□□□□ -0.63
SCARB2-210ENST00000638567 PRR34Q9NV39 138 aa11.12□□□□□ -0.63
SCARB2-210ENST00000638567 LY6G6CO95867 125 aa11.12□□□□□ -0.63
SCARB2-210ENST00000638567 SEC61GP60059 68 aa11.11□□□□□ -0.63
SCARB2-210ENST00000638567 LINC00476Q8WZB0 136 aa11.11□□□□□ -0.63
SCARB2-210ENST00000638567 NUPR2A6NF83 97 aa11.11□□□□□ -0.63
SCARB2-210ENST00000638567 CIRBP-AS1Q8TBR5 109 aa11.11□□□□□ -0.63
SCARB2-210ENST00000638567 MYO15AQ9UKN7 3530 aa11.1□□□□□ -0.63
SCARB2-210ENST00000638567 TACC2O95359 2948 aa11.1□□□□□ -0.63
SCARB2-210ENST00000638567 LINC00528Q8N1L1 170 aa11.1□□□□□ -0.63
SCARB2-210ENST00000638567 LINC00588Q9Y4M8 146 aa11.09□□□□□ -0.63
SCARB2-210ENST00000638567 SERTAD4-AS1Q5TG53 156 aa11.09□□□□□ -0.63
SCARB2-210ENST00000638567 A0A1B0GW54 56 aa11.08□□□□□ -0.63
SCARB2-210ENST00000638567 KRTAP10-3P60369 221 aa11.08□□□□□ -0.64
SCARB2-210ENST00000638567 LINC01600Q96MT4 127 aa11.08□□□□□ -0.64
SCARB2-210ENST00000638567 FAM168BA1KXE4 195 aa11.08□□□□□ -0.64
SCARB2-210ENST00000638567 hDV103S1A0JD37 113 aa11.07□□□□□ -0.64
SCARB2-210ENST00000638567 KRTAP24-1Q3LI83 254 aa11.07□□□□□ -0.64
SCARB2-210ENST00000638567 C1orf64Q8NEQ6 169 aa11.07□□□□□ -0.64
SCARB2-210ENST00000638567 KRTAP1-3Q8IUG1 177 aa11.06□□□□□ -0.64
SCARB2-210ENST00000638567 LRBAP50851 2863 aa11.06□□□□□ -0.64
SCARB2-210ENST00000638567 PMAIP1Q13794 54 aa11.06□□□□□ -0.64
SCARB2-210ENST00000638567 TNRC18O15417 2968 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-210ENST00000638567 PRO0628Q9UI54 55 aa11.05□□□□□ -0.64
SCARB2-210ENST00000638567 LOC400499M0QZD8 3231 aa11.05□□□□□ -0.64
SCARB2-210ENST00000638567 DMXL1Q9Y485 3027 aa11.04□□□□□ -0.64
SCARB2-210ENST00000638567 PHF5AQ7RTV0 110 aaKnown RBP11.03□□□□□ -0.64
SCARB2-210ENST00000638567 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
SCARB2-210ENST00000638567 DNAH10OSP0CZ25 163 aa11.03□□□□□ -0.64
SCARB2-210ENST00000638567 C15orf56Q8N910 161 aa11.03□□□□□ -0.64
SCARB2-210ENST00000638567 UBR5O95071 2799 aaPredicted RBP11.03□□□□□ -0.64
SCARB2-210ENST00000638567 NBEAL2Q6ZNJ1 2754 aa11.03□□□□□ -0.64
SCARB2-210ENST00000638567 KCNQ1DNQ9H478 68 aa11.03□□□□□ -0.64
SCARB2-210ENST00000638567 IGLV5-52A0A0A0MRZ9 124 aa11.02□□□□□ -0.65
SCARB2-210ENST00000638567 NOTCH1P46531 2555 aa11.02□□□□□ -0.65
SCARB2-210ENST00000638567 STAB1Q9NY15 2570 aa11.02□□□□□ -0.65
SCARB2-210ENST00000638567 TRBV7-4A0A0J9YYF1 115 aa11.02□□□□□ -0.65
SCARB2-210ENST00000638567 ITPR1Q14643 2758 aa11□□□□□ -0.65
SCARB2-210ENST00000638567 CHTF8P0CG12 524 aa11□□□□□ -0.65
SCARB2-210ENST00000638567 RPL37AP61513 92 aaKnown RBP11□□□□□ -0.65
SCARB2-210ENST00000638567 EPM2AB3EWF7 344 aa10.99□□□□□ -0.65
SCARB2-210ENST00000638567 K7EQZ3 153 aa10.98□□□□□ -0.65
SCARB2-210ENST00000638567 KLKP1Q107X0 134 aa10.98□□□□□ -0.65
SCARB2-210ENST00000638567 RETNLBQ9BQ08 111 aa10.98□□□□□ -0.65
SCARB2-210ENST00000638567 IGLV1-50A0A075B6I6 118 aa10.98□□□□□ -0.65
SCARB2-210ENST00000638567 C16orf90A8MZG2 172 aa10.98□□□□□ -0.65
SCARB2-210ENST00000638567 Q8N377 158 aa10.98□□□□□ -0.65
SCARB2-210ENST00000638567 COL6A5A8TX70 2615 aa10.97□□□□□ -0.65
SCARB2-210ENST00000638567 KRTAP1-1Q07627 177 aa10.96□□□□□ -0.65
SCARB2-210ENST00000638567 OBSCN-AS1Q96MR7 158 aa10.96□□□□□ -0.65
SCARB2-210ENST00000638567 MDFIQ99750 246 aa10.96□□□□□ -0.65
SCARB2-210ENST00000638567 H7BZZ5 65 aa10.95□□□□□ -0.66
SCARB2-210ENST00000638567 MOBPQ13875 183 aa10.94□□□□□ -0.66
SCARB2-210ENST00000638567 SETXQ7Z333 2677 aaKnown RBP10.94□□□□□ -0.66
SCARB2-210ENST00000638567 KRTAP10-11P60412 298 aa10.93□□□□□ -0.66
SCARB2-210ENST00000638567 ERC2-IT1O76042 136 aa10.92□□□□□ -0.66
SCARB2-210ENST00000638567 A0A0G2JQZ4 141 aa10.91□□□□□ -0.66
SCARB2-210ENST00000638567 A0A1W2PNN7 141 aa10.91□□□□□ -0.66
SCARB2-210ENST00000638567 C1orf134Q5TEV5 83 aa10.91□□□□□ -0.66
SCARB2-210ENST00000638567 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
SCARB2-210ENST00000638567 LIMD2Q9BT23 127 aa10.89□□□□□ -0.67
SCARB2-210ENST00000638567 USP34Q70CQ2 3546 aa10.88□□□□□ -0.67
SCARB2-210ENST00000638567 IGFL1Q6UW32 110 aa10.87□□□□□ -0.67
SCARB2-210ENST00000638567 TP53AIP1Q9HCN2 124 aa10.87□□□□□ -0.67
SCARB2-210ENST00000638567 NBDYA0A0U1RRE5 68 aa10.85□□□□□ -0.67
SCARB2-210ENST00000638567 H3BPC8 53 aa10.84□□□□□ -0.67
SCARB2-210ENST00000638567 CASC10Q5T4H9 136 aa10.84□□□□□ -0.67
SCARB2-210ENST00000638567 NBEAL1Q6ZS30 2694 aa10.84□□□□□ -0.67
SCARB2-210ENST00000638567 A0A1W2PNM2 257 aa10.83□□□□□ -0.68
SCARB2-210ENST00000638567 CR1P17927 2039 aa10.82□□□□□ -0.68
SCARB2-210ENST00000638567 A8MWP4 228 aa10.81□□□□□ -0.68
SCARB2-210ENST00000638567 SPINK1P00995 79 aa10.81□□□□□ -0.68
SCARB2-210ENST00000638567 SPAG11AQ6PDA7 123 aa10.81□□□□□ -0.68
SCARB2-210ENST00000638567 TLX1NBP0CAT3 122 aa10.81□□□□□ -0.68
SCARB2-210ENST00000638567 Q8NDZ9 215 aa10.81□□□□□ -0.68
SCARB2-210ENST00000638567 ZANQ9Y493 2812 aa10.8□□□□□ -0.68
SCARB2-210ENST00000638567 LINC00336Q6ZUF6 198 aa10.79□□□□□ -0.68
SCARB2-210ENST00000638567 ITPR2Q14571 2701 aa10.79□□□□□ -0.68
SCARB2-210ENST00000638567 ASH1LQ9NR48 2969 aaKnown RBP10.78□□□□□ -0.68
SCARB2-210ENST00000638567 IGKV2D-30A0A075B6S6 120 aa10.78□□□□□ -0.68
SCARB2-210ENST00000638567 K7EIL1 84 aa10.78□□□□□ -0.68
SCARB2-210ENST00000638567 K7ERS5 55 aa10.78□□□□□ -0.68
SCARB2-210ENST00000638567 IGKV2-30P06310 120 aa10.78□□□□□ -0.68
SCARB2-210ENST00000638567 PLA2G2DQ9UNK4 145 aa10.77□□□□□ -0.68
SCARB2-210ENST00000638567 RTL8CO15255 209 aa10.76□□□□□ -0.69
SCARB2-210ENST00000638567 A8MUN3 132 aa10.76□□□□□ -0.69
SCARB2-210ENST00000638567 PRR15Q8IV56 129 aa10.75□□□□□ -0.69
SCARB2-210ENST00000638567 IGLV5-48A0A075B6I7 105 aa10.74□□□□□ -0.69
SCARB2-210ENST00000638567 SPACA4Q8TDM5 124 aa10.74□□□□□ -0.69
SCARB2-210ENST00000638567 UTP20O75691 2785 aaKnown RBP10.73□□□□□ -0.69
SCARB2-210ENST00000638567 CYSTM1Q9H1C7 97 aa10.72□□□□□ -0.69
SCARB2-210ENST00000638567 ACYP2P14621 99 aa10.69□□□□□ -0.7
SCARB2-210ENST00000638567 NSD1Q96L73 2696 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms