RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 NBEAQ8NFP9 2946 aa2.96□□□□□ -1.94
SCN1A-210ENST00000635776 H3BPC8 53 aa2.95□□□□□ -1.94
SCN1A-210ENST00000635776 C3orf84H3BNL1 204 aa2.95□□□□□ -1.94
SCN1A-210ENST00000635776 Q9BRP9 147 aa2.95□□□□□ -1.94
SCN1A-210ENST00000635776 C1orf134Q5TEV5 83 aa2.95□□□□□ -1.94
SCN1A-210ENST00000635776 SPEGQ15772 3267 aa2.95□□□□□ -1.94
SCN1A-210ENST00000635776 LOC400499M0QZD8 3231 aa2.94□□□□□ -1.94
SCN1A-210ENST00000635776 Q8N377 158 aa2.94□□□□□ -1.94
SCN1A-210ENST00000635776 KALRNO60229 2985 aa2.94□□□□□ -1.94
SCN1A-210ENST00000635776 SPRR1BP22528 89 aa2.94□□□□□ -1.94
SCN1A-210ENST00000635776 A0A096LNI7 61 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 KLKP1Q107X0 134 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 APCP25054 2843 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 SPRR4Q96PI1 79 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 CHD6Q8TD26 2715 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 LINC00476Q8WZB0 136 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 SERP1Q9Y6X1 66 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 CENPEQ02224 2701 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 Q8NDZ9 215 aa2.93□□□□□ -1.94
SCN1A-210ENST00000635776 MYO15AQ9UKN7 3530 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 EPM2AB3EWF7 344 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 HCG22E2RYF7 251 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 IGLV5-52A0A0A0MRZ9 124 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 SCXQ7RTU7 201 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 COL12A1Q99715 3063 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 TEX15Q9BXT5 2789 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 A0A087WSZ3 146 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 TP53AIP1Q9HCN2 124 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 CELSR3Q9NYQ7 3312 aa2.92□□□□□ -1.94
SCN1A-210ENST00000635776 KRTAP4-16G5E9R7 235 aaPredicted RBP2.91□□□□□ -1.94
SCN1A-210ENST00000635776 PRLHP81277 87 aa2.91□□□□□ -1.94
SCN1A-210ENST00000635776 WDFY3Q8IZQ1 3526 aa2.91□□□□□ -1.94
SCN1A-210ENST00000635776 MUC3AQ02505 3323 aa2.91□□□□□ -1.94
SCN1A-210ENST00000635776 SMIM26A0A096LP01 95 aa2.91□□□□□ -1.94
SCN1A-210ENST00000635776 hDV103S1A0JD37 113 aa2.91□□□□□ -1.94
SCN1A-210ENST00000635776 WWC2-AS2Q96NR7 200 aa2.91□□□□□ -1.94
SCN1A-210ENST00000635776 A0A087WTM6 91 aa2.9□□□□□ -1.94
SCN1A-210ENST00000635776 ZZEF1O43149 2961 aa2.9□□□□□ -1.94
SCN1A-210ENST00000635776 TNP2Q05952 138 aa2.9□□□□□ -1.94
SCN1A-210ENST00000635776 UTP20O75691 2785 aaKnown RBP2.9□□□□□ -1.94
SCN1A-210ENST00000635776 RTL8CO15255 209 aa2.9□□□□□ -1.94
SCN1A-210ENST00000635776 PMAIP1Q13794 54 aa2.9□□□□□ -1.94
SCN1A-210ENST00000635776 LRBAP50851 2863 aa2.9□□□□□ -1.95
SCN1A-210ENST00000635776 ST20-AS1Q8NBB2 130 aa2.9□□□□□ -1.95
SCN1A-210ENST00000635776 FAM168BA1KXE4 195 aa2.9□□□□□ -1.95
SCN1A-210ENST00000635776 MOBPQ13875 183 aa2.9□□□□□ -1.95
SCN1A-210ENST00000635776 CASC2Q6XLA1 102 aa2.9□□□□□ -1.95
SCN1A-210ENST00000635776 A0A1W2PNM2 257 aa2.9□□□□□ -1.95
SCN1A-210ENST00000635776 PHF5AQ7RTV0 110 aaKnown RBP2.89□□□□□ -1.95
SCN1A-210ENST00000635776 C4orf48Q5BLP8 95 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 IGFL1Q6UW32 110 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 SSBP3-AS1Q7Z2R9 100 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 KMT2BQ9UMN6 2715 aaPredicted RBP2.89□□□□□ -1.95
SCN1A-210ENST00000635776 CASC10Q5T4H9 136 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 ATRQ13535 2644 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 LY6G6CO95867 125 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 IGKV4-1P06312 121 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 A8MWP4 228 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 FBN2P35556 2912 aa2.89□□□□□ -1.95
SCN1A-210ENST00000635776 M0R2N4 97 aa2.88□□□□□ -1.95
SCN1A-210ENST00000635776 SETXQ7Z333 2677 aaKnown RBP2.88□□□□□ -1.95
SCN1A-210ENST00000635776 A0A1W2PNN7 141 aa2.88□□□□□ -1.95
SCN1A-210ENST00000635776 ZNF861PO60384 105 aa2.88□□□□□ -1.95
SCN1A-210ENST00000635776 NSD1Q96L73 2696 aaPredicted RBP2.88□□□□□ -1.95
SCN1A-210ENST00000635776 DMDP11532 3685 aa2.88□□□□□ -1.95
SCN1A-210ENST00000635776 LRCOL1A6NCL2 159 aa2.88□□□□□ -1.95
SCN1A-210ENST00000635776 CD164Q04900 197 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 LIMD2Q9BT23 127 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 DMBT1Q9UGM3 2413 aaPredicted RBP2.87□□□□□ -1.95
SCN1A-210ENST00000635776 PLAC8Q9NZF1 115 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 SPACA4Q8TDM5 124 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 C8orf87E5RJ46 101 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 C4orf26Q17RF5 130 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 KRTAP21-3Q3LHN1 58 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 SMIM29Q86T20 159 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 WFDC13Q8IUB5 93 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 FLNBO75369 2602 aaKnown RBP2.87□□□□□ -1.95
SCN1A-210ENST00000635776 PRR15Q8IV56 129 aa2.87□□□□□ -1.95
SCN1A-210ENST00000635776 Q5XG85 94 aa2.86□□□□□ -1.95
SCN1A-210ENST00000635776 IGLV9-49A0A0B4J1Y8 123 aa2.86□□□□□ -1.95
SCN1A-210ENST00000635776 A6NED7 52 aa2.86□□□□□ -1.95
SCN1A-210ENST00000635776 NDUFS5O43920 106 aa2.86□□□□□ -1.95
SCN1A-210ENST00000635776 CYSTM1Q9H1C7 97 aa2.86□□□□□ -1.95
SCN1A-210ENST00000635776 PRR15LQ9BU68 103 aa2.86□□□□□ -1.95
SCN1A-210ENST00000635776 CFAP47Q6ZTR5 3102 aa2.86□□□□□ -1.95
SCN1A-210ENST00000635776 CHTF8P0CG12 524 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 OCR1Q9BZK8 76 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 TEP1Q99973 2627 aaKnown RBP2.85□□□□□ -1.95
SCN1A-210ENST00000635776 KRTAP1-5Q9BYS1 174 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 FAM30AQ9NZY2 134 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 K7EQZ3 153 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 PDZD2O15018 2839 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 H7BZZ5 65 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 OXTP01178 125 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 PSPHP1O15172 72 aa2.85□□□□□ -1.95
SCN1A-210ENST00000635776 Q8N9L7 120 aa2.84□□□□□ -1.95
SCN1A-210ENST00000635776 Q6ZR54 194 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms