RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	UMAD1	C9J7I0	102 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273		F2Z2F3	143 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	TRGC1	P0CF51	173 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	GNG4	P50150	75 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	RPS20	P60866	119 aa	Known RBP	2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	ZCCHC13	Q8WW36	166 aa	Known RBP	2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	SIGMAR1	Q99720	223 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273		Q9BRP9	147 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	C2orf88	Q9BSF0	95 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	MED9	Q9NWA0	146 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	RNF213	Q63HN8	5207 aa		2.96	□□□□□ -1.94
SMARCA2-238	ENST00000635273	GVQW2	A0A096LPI5	108 aa	Predicted RBP	2.95	□□□□□ -1.94
SMARCA2-238	ENST00000635273	KANTR	A0A1W2PQU2	76 aa		2.95	□□□□□ -1.94
SMARCA2-238	ENST00000635273	CCL25	O15444	150 aa		2.95	□□□□□ -1.94
SMARCA2-238	ENST00000635273	SRP19	P09132	144 aa	Known RBP	2.95	□□□□□ -1.94
SMARCA2-238	ENST00000635273	C9orf62	Q8N4C0	152 aa		2.95	□□□□□ -1.94
SMARCA2-238	ENST00000635273	OR13C6P	Q8NH95	151 aa		2.95	□□□□□ -1.94
SMARCA2-238	ENST00000635273	TRBV20OR9-2	A0A075B6H5	130 aa		2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	LINC00959	A0A1B0GUT2	108 aa		2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	PDE6D	O43924	150 aa		2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	OR5A1	Q8NGJ0	315 aa		2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	CARD19	Q96LW7	228 aa		2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	RNASE7	Q9H1E1	156 aa	Known RBP	2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	XAGE1A	Q9HD64	81 aa		2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	MANBAL	Q9NQG1	85 aa		2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	LINC00474	Q9P2X8	69 aa		2.94	□□□□□ -1.94
SMARCA2-238	ENST00000635273	IGHV1-58	A0A0C4DH39	117 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	HMSD	A8MTL9	139 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	LINC00587	B1AMM8	73 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273		I3L3M4	83 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	MT-ND6	P03923	174 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	SMIM6	P0DI80	62 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	BCL2	P10415	239 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	ZNF345	Q14585	488 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	KRTAP6-3	Q3LI67	103 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	C1orf137	Q5JT78	98 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	BORCS7	Q96B45	105 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	TMEM242	Q9NWH2	141 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	LPA	P08519	4548 aa		2.93	□□□□□ -1.94
SMARCA2-238	ENST00000635273	TRAV1-1	A0A0B4J248	108 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	LOC107984640	A0A0U1RRK4	108 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	NCR2	O95944	276 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	HINT1	P49773	126 aa	Predicted RBP	2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	EIF5A	P63241	154 aa	Known RBP	2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	C9orf116	Q5BN46	136 aa	Predicted RBP	2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	TEX261	Q6UWH6	196 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	PHF5A	Q7RTV0	110 aa	Known RBP	2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	C5orf38	Q86SI9	138 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	IMMP2L	Q96T52	175 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	C12orf57	Q99622	126 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	ST20	Q9HBF5	79 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	CDC42SE2	Q9NRR3	84 aa		2.92	□□□□□ -1.94
SMARCA2-238	ENST00000635273	TRAV13-1	A0A0B4J241	112 aa		2.91	□□□□□ -1.94
SMARCA2-238	ENST00000635273	LEPROT	O15243	131 aa		2.91	□□□□□ -1.94
SMARCA2-238	ENST00000635273	S100A8	P05109	93 aa		2.91	□□□□□ -1.94
SMARCA2-238	ENST00000635273	ZNF25	P17030	456 aa	Predicted RBP	2.91	□□□□□ -1.94
SMARCA2-238	ENST00000635273	EIF5AL1	Q6IS14	154 aa	Known RBP	2.91	□□□□□ -1.94
SMARCA2-238	ENST00000635273	SMIM20	Q8N5G0	67 aa		2.91	□□□□□ -1.94
SMARCA2-238	ENST00000635273	NUP35	Q8NFH5	326 aa		2.91	□□□□□ -1.94
SMARCA2-238	ENST00000635273	CNFN	Q9BYD5	112 aa		2.91	□□□□□ -1.94
SMARCA2-238	ENST00000635273	C1orf196	B1AJZ1	125 aa		2.9	□□□□□ -1.95
SMARCA2-238	ENST00000635273	DLEU1	O43261	78 aa		2.9	□□□□□ -1.95
SMARCA2-238	ENST00000635273	FCER1G	P30273	86 aa		2.9	□□□□□ -1.95
SMARCA2-238	ENST00000635273	POLR2K	P53803	58 aa	Known RBP	2.9	□□□□□ -1.95
SMARCA2-238	ENST00000635273	TRBV6-5	A0A0K0K1A5	114 aa		2.89	□□□□□ -1.95
SMARCA2-238	ENST00000635273		A0A1B0GUT8	65 aa		2.89	□□□□□ -1.95
SMARCA2-238	ENST00000635273	C7orf77	A4D0Y5	90 aa		2.89	□□□□□ -1.95
SMARCA2-238	ENST00000635273		H3BT86	120 aa		2.89	□□□□□ -1.95
SMARCA2-238	ENST00000635273	RPL28	P46779	137 aa	Known RBP	2.89	□□□□□ -1.95
SMARCA2-238	ENST00000635273	DIRC1	Q969H9	104 aa		2.89	□□□□□ -1.95
SMARCA2-238	ENST00000635273	PRO2289	Q9P1D8	64 aa		2.89	□□□□□ -1.95
SMARCA2-238	ENST00000635273		A0A0G2JQZ4	141 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	TRBV27	A0A0K0K1C4	114 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273		A0A1B0GV90	55 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	HIGD1C	A8MV81	97 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	SPAG11B	Q08648	103 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	ANKRD29	Q8N6D5	301 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	VPS25	Q9BRG1	176 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	TMEM191A	Q9H0A3	160 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	UBE2D4	Q9Y2X8	147 aa		2.88	□□□□□ -1.95
SMARCA2-238	ENST00000635273	FAM236D	A0A1B0GTK5	79 aa		2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273	FAM236C	P0DP71	79 aa		2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273	RPL39	P62891	51 aa	Known RBP	2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273	UBE2B	P63146	152 aa		2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273		Q6ZUT4	128 aa		2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273	KRTAP13-1	Q8IUC0	172 aa		2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273	TSKU	Q8WUA8	353 aa		2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273	TMEM126A	Q9H061	195 aa		2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273	NAT8	Q9UHE5	227 aa		2.87	□□□□□ -1.95
SMARCA2-238	ENST00000635273		K7ERU9	68 aa		2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	NDUFA1	O15239	70 aa		2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	UBE2D1	P51668	147 aa		2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	CKS1B	P61024	79 aa		2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	RPS28	P62857	69 aa	Known RBP	2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	C2orf82	Q6UX34	121 aa		2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	ALKAL2	Q6UX46	152 aa		2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	SMIM7	Q9BQ49	75 aa		2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	MRPL35	Q9NZE8	188 aa	Known RBP	2.86	□□□□□ -1.95
SMARCA2-238	ENST00000635273	C6orf48	Q9UBA6	75 aa		2.86	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms