RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 LINC01565O15544 149 aa2.6□□□□□ -1.99
R3HDM1-220ENST00000628915 CR1P17927 2039 aa2.6□□□□□ -1.99
R3HDM1-220ENST00000628915 FAM208BQ5VWN6 2430 aa2.6□□□□□ -1.99
R3HDM1-220ENST00000628915 UQCR11O14957 56 aa2.6□□□□□ -1.99
R3HDM1-220ENST00000628915 KLK9Q2XQG4 91 aa2.6□□□□□ -1.99
R3HDM1-220ENST00000628915 C9orf129Q5T035 196 aaKnown RBP2.6□□□□□ -1.99
R3HDM1-220ENST00000628915 NOTCH3Q9UM47 2321 aa2.6□□□□□ -1.99
R3HDM1-220ENST00000628915 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 LOC110117498A0A087WWA1 95 aa2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 A0A1B0GU69 56 aa2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 SPINK7P58062 85 aa2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 DMAC1Q96GE9 116 aa2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 C20orf166-AS1Q96NR2 134 aa2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 BDP1A6H8Y1 2624 aa2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 Q8N9L7 120 aa2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 VPS13DQ5THJ4 4388 aa2.59□□□□□ -1.99
R3HDM1-220ENST00000628915 IGHV3-53P01767 116 aa2.59□□□□□ -2
R3HDM1-220ENST00000628915 MINOS1Q5TGZ0 78 aa2.59□□□□□ -2
R3HDM1-220ENST00000628915 LINC01558Q9Y6Z2 57 aa2.59□□□□□ -2
R3HDM1-220ENST00000628915 LY6G6DO95868 133 aa2.59□□□□□ -2
R3HDM1-220ENST00000628915 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 IGKV3-7A0A075B6H7 116 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 IGLV10-54A0A075B6I4 117 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 DNAH10OSP0CZ25 163 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 HTN1P15515 57 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 NF1P21359 2839 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 TLX1NBP0CAT3 122 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 FAM104AQ969W3 186 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 IGKV2-28A0A075B6P5 120 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.58□□□□□ -2
R3HDM1-220ENST00000628915 IGKV2D-28P01615 120 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 EGFEM1PQ0D2K5 195 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 Q6ZR54 194 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 ROS1P08922 2347 aa2.58□□□□□ -2
R3HDM1-220ENST00000628915 TMEM105Q8N8V8 129 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 SPANXA2-OT1Q8N9U9 137 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 Q8NBF4 154 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 LINC01006Q8NI28 216 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 DNAH11Q96DT5 4516 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 IGLV1-50A0A075B6I6 118 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 TRBV6-4A0A1B0GX49 114 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 SSBP3-AS1Q7Z2R9 100 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 TECTAO75443 2155 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 A0A1W2PNM2 257 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 CCL18P55774 89 aa2.57□□□□□ -2
R3HDM1-220ENST00000628915 COX6A2Q02221 97 aa2.56□□□□□ -2
R3HDM1-220ENST00000628915 KRTAP21-3Q3LHN1 58 aa2.56□□□□□ -2
R3HDM1-220ENST00000628915 TTC28Q96AY4 2481 aa2.56□□□□□ -2
R3HDM1-220ENST00000628915 IGKV3OR2-268A0A0C4DH90 116 aa2.56□□□□□ -2
R3HDM1-220ENST00000628915 ODF3BA8MYP8 253 aa2.56□□□□□ -2
R3HDM1-220ENST00000628915 C7orf33Q8WU49 177 aa2.56□□□□□ -2
R3HDM1-220ENST00000628915 SPTAN1Q13813 2472 aaKnown RBP2.55□□□□□ -2
R3HDM1-220ENST00000628915 COX7BP24311 80 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 MUC7Q8TAX7 377 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 EPPK1P58107 5090 aaKnown RBP2.55□□□□□ -2
R3HDM1-220ENST00000628915 USMG5Q96IX5 58 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 RHPN1-AS1Q9BWJ2 59 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 KRTAP9-2Q9BYQ4 174 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 ALMS1Q8TCU4 4167 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 DOPEY1Q5JWR5 2465 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 ZFP36P26651 326 aaKnown RBP2.55□□□□□ -2
R3HDM1-220ENST00000628915 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 Q8NDZ9 215 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 C16orf74Q96GX8 76 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 C2CD3Q4AC94 2353 aa2.55□□□□□ -2
R3HDM1-220ENST00000628915 A0A0J9YWU9 116 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 NUPR2A6NF83 97 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 DEFB1P60022 68 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 LINC00483Q53H64 154 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 WFDC13Q8IUB5 93 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 PIEZO1Q92508 2521 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 C10orf25Q5T742 122 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 IGLV4-60A0A075B6I1 120 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 IGLV7-46A0A075B6I9 117 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 H3BUA1 57 aa2.54□□□□□ -2
R3HDM1-220ENST00000628915 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 SLURP1P55000 103 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 DEFB114Q30KQ6 69 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 LCE3BQ5TA77 95 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 WFDC10BQ8IUB3 73 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 G3V318 75 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 IGKV4-1P06312 121 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 ACYP2P14621 99 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 C1orf137Q5JT78 98 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 LINC00575Q6W349 94 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 IGKV3-20P01619 116 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 SPINK13Q1W4C9 94 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 CASC10Q5T4H9 136 aa2.53□□□□□ -2
R3HDM1-220ENST00000628915 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.52□□□□□ -2.01
R3HDM1-220ENST00000628915 RTL8CO15255 209 aa2.52□□□□□ -2.01
R3HDM1-220ENST00000628915 PCOTHQ58A44 107 aa2.52□□□□□ -2.01
R3HDM1-220ENST00000628915 KPRPQ5T749 579 aaPredicted RBP2.52□□□□□ -2.01
R3HDM1-220ENST00000628915 NAV2Q8IVL1 2488 aa2.52□□□□□ -2.01
R3HDM1-220ENST00000628915 TRGV1A0A0A0MS02 117 aa2.52□□□□□ -2.01
R3HDM1-220ENST00000628915 IGLV7-43P04211 117 aa2.52□□□□□ -2.01
R3HDM1-220ENST00000628915 PROK1P58294 105 aa2.52□□□□□ -2.01
R3HDM1-220ENST00000628915 ZFHX2Q9C0A1 2572 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms